RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 TCEAL5Q5H9L2 206 aa15.86■□□□□ 0.13
SGPP1-201ENST00000247225 ZDHHC20Q5W0Z9 365 aa15.86■□□□□ 0.13
SGPP1-201ENST00000247225 C18orf63Q68DL7 685 aa15.86■□□□□ 0.13
SGPP1-201ENST00000247225 CDH24Q86UP0 819 aa15.86■□□□□ 0.13
SGPP1-201ENST00000247225 ADIPOR2Q86V24 386 aa15.86■□□□□ 0.13
SGPP1-201ENST00000247225 ZNF689Q96CS4 500 aaPredicted RBP15.86■□□□□ 0.13
SGPP1-201ENST00000247225 C1QTNF6Q9BXI9 259 aa15.86■□□□□ 0.13
SGPP1-201ENST00000247225 KLHL42Q9P2K6 505 aa15.86■□□□□ 0.13
SGPP1-201ENST00000247225 KCNK6Q9Y257 313 aa15.86■□□□□ 0.13
SGPP1-201ENST00000247225 A0A1W2PRG6 482 aa15.86■□□□□ 0.13
SGPP1-201ENST00000247225 NPIPB8E9PQR5 432 aa15.86■□□□□ 0.13
SGPP1-201ENST00000247225 HRGP04196 525 aa15.86■□□□□ 0.13
SGPP1-201ENST00000247225 GKN3PP0CG01 181 aa15.86■□□□□ 0.13
SGPP1-201ENST00000247225 HCCSP53701 268 aa15.86■□□□□ 0.13
SGPP1-201ENST00000247225 SMIM11AP58511 58 aa15.86■□□□□ 0.13
SGPP1-201ENST00000247225 TOR1AIP1Q5JTV8 583 aa15.86■□□□□ 0.13
SGPP1-201ENST00000247225 C12orf73Q69YU5 71 aa15.86■□□□□ 0.13
SGPP1-201ENST00000247225 GDPGP1Q6ZNW5 385 aa15.86■□□□□ 0.13
SGPP1-201ENST00000247225 FAM92BQ6ZTR7 304 aa15.86■□□□□ 0.13
SGPP1-201ENST00000247225 PRSS45Q7RTY3 260 aa15.86■□□□□ 0.13
SGPP1-201ENST00000247225 CCDC28AQ8IWP9 274 aa15.86■□□□□ 0.13
SGPP1-201ENST00000247225 NEURL3Q96EH8 262 aa15.86■□□□□ 0.13
SGPP1-201ENST00000247225 EIF3KQ9UBQ5 218 aaKnown RBP15.86■□□□□ 0.13
SGPP1-201ENST00000247225 RASD1Q9Y272 281 aa15.86■□□□□ 0.13
SGPP1-201ENST00000247225 SNTNA6NMZ2 147 aa15.85■□□□□ 0.13
SGPP1-201ENST00000247225 PSMD9O00233 223 aa15.85■□□□□ 0.13
SGPP1-201ENST00000247225 ACP5P13686 325 aa15.85■□□□□ 0.13
SGPP1-201ENST00000247225 CPEP16870 476 aa15.85■□□□□ 0.13
SGPP1-201ENST00000247225 ZNF30P17039 623 aa15.85■□□□□ 0.13
SGPP1-201ENST00000247225 ZNF81P51508 661 aa15.85■□□□□ 0.13
SGPP1-201ENST00000247225 SREBF2Q12772 1141 aa15.85■□□□□ 0.13
SGPP1-201ENST00000247225 ZNF805Q5CZA5 627 aa15.85■□□□□ 0.13
SGPP1-201ENST00000247225 C19orf48Q6RUI8 117 aa15.85■□□□□ 0.13
SGPP1-201ENST00000247225 ELAC1Q9H777 363 aaKnown RBP15.85■□□□□ 0.13
SGPP1-201ENST00000247225 SEMA4GQ9NTN9 838 aa15.85■□□□□ 0.13
SGPP1-201ENST00000247225 STOML2Q9UJZ1 356 aa15.85■□□□□ 0.13
SGPP1-201ENST00000247225 OR1A2Q9Y585 309 aa15.85■□□□□ 0.13
SGPP1-201ENST00000247225 CHD7Q9P2D1 2997 aa15.85■□□□□ 0.13
SGPP1-201ENST00000247225 PRODHO43272 600 aa15.85■□□□□ 0.13
SGPP1-201ENST00000247225 PPP3R1P63098 170 aa15.85■□□□□ 0.13
SGPP1-201ENST00000247225 C6orf132Q5T0Z8 1188 aa15.85■□□□□ 0.13
SGPP1-201ENST00000247225 SFRP4Q6FHJ7 346 aaPredicted RBP15.85■□□□□ 0.13
SGPP1-201ENST00000247225 KREMEN2Q8NCW0 462 aa15.85■□□□□ 0.13
SGPP1-201ENST00000247225 OR4M1Q8NGD0 313 aa15.85■□□□□ 0.13
SGPP1-201ENST00000247225 OR51A7Q8NH64 312 aa15.85■□□□□ 0.13
SGPP1-201ENST00000247225 ZFAND1Q8TCF1 268 aa15.85■□□□□ 0.13
SGPP1-201ENST00000247225 VOPP1Q96AW1 172 aa15.85■□□□□ 0.13
SGPP1-201ENST00000247225 RIPOR3Q96MK2 946 aa15.85■□□□□ 0.13
SGPP1-201ENST00000247225 TSPAN4O14817 238 aa15.84■□□□□ 0.13
SGPP1-201ENST00000247225 AGFG1P52594 562 aaKnown RBP15.84■□□□□ 0.13
SGPP1-201ENST00000247225 LIMK1P53667 647 aa15.84■□□□□ 0.13
SGPP1-201ENST00000247225 RRAS2P62070 204 aaPredicted RBP15.84■□□□□ 0.13
SGPP1-201ENST00000247225 RAB33AQ14088 237 aa15.84■□□□□ 0.13
SGPP1-201ENST00000247225 GPR176Q14439 515 aa15.84■□□□□ 0.13
SGPP1-201ENST00000247225 PXDC1Q5TGL8 231 aa15.84■□□□□ 0.13
SGPP1-201ENST00000247225 PLPP4Q5VZY2 271 aa15.84■□□□□ 0.13
SGPP1-201ENST00000247225 RD3Q7Z3Z2 195 aa15.84■□□□□ 0.13
SGPP1-201ENST00000247225 ADGRD2Q7Z7M1 963 aa15.84■□□□□ 0.13
SGPP1-201ENST00000247225 GANCQ8TET4 914 aa15.84■□□□□ 0.13
SGPP1-201ENST00000247225 AKAP1Q92667 903 aaKnown RBP eCLIP15.84■□□□□ 0.13
SGPP1-201ENST00000247225 NUS1Q96E22 293 aa15.84■□□□□ 0.13
SGPP1-201ENST00000247225 TRMT2BQ96GJ1 504 aaKnown RBP15.84■□□□□ 0.13
SGPP1-201ENST00000247225 DEFB118Q96PH6 123 aa15.84■□□□□ 0.13
SGPP1-201ENST00000247225 THAP7Q9BT49 309 aaPredicted RBP15.84■□□□□ 0.13
SGPP1-201ENST00000247225 ZCCHC2Q9C0B9 1178 aaKnown RBP15.84■□□□□ 0.13
SGPP1-201ENST00000247225 TRPM7Q96QT4 1865 aa15.84■□□□□ 0.13
SGPP1-201ENST00000247225 PLXND1Q9Y4D7 1925 aa15.84■□□□□ 0.13
SGPP1-201ENST00000247225 NUPL2O15504 423 aaKnown RBP15.84■□□□□ 0.13
SGPP1-201ENST00000247225 HLA-DPB1P04440 258 aa15.84■□□□□ 0.13
SGPP1-201ENST00000247225 ACP2P11117 423 aa15.84■□□□□ 0.13
SGPP1-201ENST00000247225 GIFP27352 417 aa15.84■□□□□ 0.13
SGPP1-201ENST00000247225 NTSP30990 170 aa15.84■□□□□ 0.13
SGPP1-201ENST00000247225 MC3RP41968 323 aa15.84■□□□□ 0.13
SGPP1-201ENST00000247225 VSX2P58304 361 aaPredicted RBP15.84■□□□□ 0.13
SGPP1-201ENST00000247225 NTRK2Q16620 822 aa15.84■□□□□ 0.13
SGPP1-201ENST00000247225 MZT2AQ6P582 158 aa15.84■□□□□ 0.13
SGPP1-201ENST00000247225 CHMP1BQ7LBR1 199 aa15.84■□□□□ 0.13
SGPP1-201ENST00000247225 CAMKMTQ7Z624 323 aa15.84■□□□□ 0.13
SGPP1-201ENST00000247225 ZNF547Q8IVP9 402 aa15.84■□□□□ 0.13
SGPP1-201ENST00000247225 SERPINA12Q8IW75 414 aa15.84■□□□□ 0.13
SGPP1-201ENST00000247225 TBC1D19Q8N5T2 526 aa15.84■□□□□ 0.13
SGPP1-201ENST00000247225 NATD1Q8N6N6 113 aa15.84■□□□□ 0.13
SGPP1-201ENST00000247225 GOT1L1Q8NHS2 421 aaPredicted RBP15.84■□□□□ 0.13
SGPP1-201ENST00000247225 TMEM255BQ8WV15 326 aa15.84■□□□□ 0.13
SGPP1-201ENST00000247225 ATF6BQ99941 703 aa15.84■□□□□ 0.13
SGPP1-201ENST00000247225 POLDIP3Q9BY77 421 aaKnown RBP15.84■□□□□ 0.13
SGPP1-201ENST00000247225 CPEB1Q9BZB8 566 aaKnown RBP15.84■□□□□ 0.13
SGPP1-201ENST00000247225 C6orf106Q9H6K1 298 aaPredicted RBP15.84■□□□□ 0.13
SGPP1-201ENST00000247225 PPIEQ9UNP9 301 aaKnown RBP15.84■□□□□ 0.13
SGPP1-201ENST00000247225 A0A0A6YYJ9 748 aa15.84■□□□□ 0.13
SGPP1-201ENST00000247225 OR52A4PA6NMU1 304 aa15.84■□□□□ 0.13
SGPP1-201ENST00000247225 DPM1O60762 260 aa15.84■□□□□ 0.13
SGPP1-201ENST00000247225 PIPP12273 146 aaPredicted RBP15.84■□□□□ 0.13
SGPP1-201ENST00000247225 C6P13671 934 aa15.84■□□□□ 0.13
SGPP1-201ENST00000247225 NOS3P29474 1203 aa15.84■□□□□ 0.13
SGPP1-201ENST00000247225 IRS1P35568 1242 aa15.84■□□□□ 0.13
SGPP1-201ENST00000247225 MLLT3P42568 568 aaPredicted RBP15.84■□□□□ 0.13
SGPP1-201ENST00000247225 ZMYND11Q15326 602 aa15.84■□□□□ 0.13
SGPP1-201ENST00000247225 CLPPQ16740 277 aaPredicted RBP15.84■□□□□ 0.13
SGPP1-201ENST00000247225 GPR135Q8IZ08 494 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms