RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 SH2D7A6NKC9 451 aaPredicted RBP10.57□□□□□ -0.72
MSH6-201ENST00000234420 EDN1P05305 212 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 LRIT3Q3SXY7 679 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 ZNF718Q3SXZ3 478 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 RBMS3Q6XE24 437 aaKnown RBP10.57□□□□□ -0.72
MSH6-201ENST00000234420 ENDOVQ8N8Q3 282 aaKnown RBP10.57□□□□□ -0.72
MSH6-201ENST00000234420 RBM24Q9BX46 236 aaKnown RBP10.57□□□□□ -0.72
MSH6-201ENST00000234420 AGXT2Q9BYV1 514 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 LHPPQ9H008 270 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 TULP4Q9NRJ4 1543 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 OR5H15A6NDH6 313 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 OR5H14A6NHG9 310 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 OR5H1A6NKK0 313 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 LIPCP11150 499 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 PIM3Q86V86 326 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 ZDHHC16Q969W1 377 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 TMEM134Q9H6X4 195 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 WIF1Q9Y5W5 379 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 URGCP-MRPS24S4R325 110 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 LEFTY2O00292 366 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 TO15178 435 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 RPL13AP40429 203 aaKnown RBP10.57□□□□□ -0.72
MSH6-201ENST00000234420 VIPR2P41587 438 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 FXYD4P59646 89 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 LY6G5CQ5SRR4 150 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 KBTBD6Q86V97 674 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 DNAJB8Q8NHS0 232 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 CDC6Q99741 560 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 LRIT1Q9P2V4 623 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 TRBV2A0A0J9YWF9 115 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 B4GAT1O43505 415 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 BPIP17213 487 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 NAA10P41227 235 aaPredicted RBP10.57□□□□□ -0.72
MSH6-201ENST00000234420 TAS2R20P59543 309 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 RSU1Q15404 277 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 SPHARQ15513 63 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 NKAIN2Q5VXU1 208 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 DPY19L2P1Q6NXN4 242 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 PGAP1Q75T13 922 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 ZNF765Q7L2R6 523 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 PIWIL3Q7Z3Z3 882 aaKnown RBP10.57□□□□□ -0.72
MSH6-201ENST00000234420 DCP2Q8IU60 420 aaKnown RBP10.57□□□□□ -0.72
MSH6-201ENST00000234420 FKBP10Q96AY3 582 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 LRFN5Q96NI6 719 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 NUDT9Q9BW91 350 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 GBA3Q9H227 469 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 IKZF4Q9H2S9 585 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 DHDHQ9UQ10 334 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.57□□□□□ -0.72
MSH6-201ENST00000234420 SPATA31C2B4DYI2 1134 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 SIX3O95343 332 aaPredicted RBP10.57□□□□□ -0.72
MSH6-201ENST00000234420 RFC2P35250 354 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 POU3F4P49335 361 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 ART1P52961 327 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 PSPHP78330 225 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 CYCSP99999 105 aaKnown RBP10.57□□□□□ -0.72
MSH6-201ENST00000234420 ST3GAL3Q11203 375 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 GINS1Q14691 196 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 SEC23AQ15436 765 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 C14orf79Q96F83 325 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 PGAM5Q96HS1 289 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 NKX3-1Q99801 234 aaPredicted RBP10.57□□□□□ -0.72
MSH6-201ENST00000234420 RIOX1Q9H6W3 641 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 FAM86C1Q9NVL1 165 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 RNF215Q9Y6U7 377 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 MTMR11A4FU01 709 aa10.56□□□□□ -0.72
MSH6-201ENST00000234420 SOWAHBA6NEL2 793 aa10.56□□□□□ -0.72
MSH6-201ENST00000234420 ANKRD28O15084 1053 aa10.56□□□□□ -0.72
MSH6-201ENST00000234420 POP7O75817 140 aaKnown RBP10.56□□□□□ -0.72
MSH6-201ENST00000234420 DIRAS3O95661 229 aa10.56□□□□□ -0.72
MSH6-201ENST00000234420 CPN1P15169 458 aa10.56□□□□□ -0.72
MSH6-201ENST00000234420 CDK6Q00534 326 aa10.56□□□□□ -0.72
MSH6-201ENST00000234420 ALKBH6Q3KRA9 238 aa10.56□□□□□ -0.72
MSH6-201ENST00000234420 CST9LP1Q5W188 147 aa10.56□□□□□ -0.72
MSH6-201ENST00000234420 OR52W1Q6IF63 320 aa10.56□□□□□ -0.72
MSH6-201ENST00000234420 GPR155Q7Z3F1 870 aa10.56□□□□□ -0.72
MSH6-201ENST00000234420 FAM160A2Q8N612 972 aaPredicted RBP10.56□□□□□ -0.72
MSH6-201ENST00000234420 SEMA6DQ8NFY4 1073 aa10.56□□□□□ -0.72
MSH6-201ENST00000234420 METTL2AQ96IZ6 378 aaKnown RBP10.56□□□□□ -0.72
MSH6-201ENST00000234420 ZNF681Q96N22 645 aa10.56□□□□□ -0.72
MSH6-201ENST00000234420 NAA11Q9BSU3 229 aaPredicted RBP10.56□□□□□ -0.72
MSH6-201ENST00000234420 TPPP3Q9BW30 176 aa10.56□□□□□ -0.72
MSH6-201ENST00000234420 ADAMTS10Q9H324 1103 aa10.56□□□□□ -0.72
MSH6-201ENST00000234420 C12orf49Q9H741 205 aa10.56□□□□□ -0.72
MSH6-201ENST00000234420 OXSMQ9NWU1 459 aa10.56□□□□□ -0.72
MSH6-201ENST00000234420 TAS2R16Q9NYV7 291 aa10.56□□□□□ -0.72
MSH6-201ENST00000234420 RARRES3Q9UL19 164 aa10.56□□□□□ -0.72
MSH6-201ENST00000234420 PIAS3Q9Y6X2 628 aa10.56□□□□□ -0.72
MSH6-201ENST00000234420 SCO1O75880 301 aa10.56□□□□□ -0.72
MSH6-201ENST00000234420 MT-CO2P00403 227 aa10.56□□□□□ -0.72
MSH6-201ENST00000234420 EPOP01588 193 aa10.56□□□□□ -0.72
MSH6-201ENST00000234420 TSFMP43897 325 aaKnown RBP10.56□□□□□ -0.72
MSH6-201ENST00000234420 LRFN4Q6PJG9 635 aa10.56□□□□□ -0.72
MSH6-201ENST00000234420 NANPQ8TBE9 248 aa10.56□□□□□ -0.72
MSH6-201ENST00000234420 FANK1Q8TC84 345 aa10.56□□□□□ -0.72
MSH6-201ENST00000234420 PROKR1Q8TCW9 393 aa10.56□□□□□ -0.72
MSH6-201ENST00000234420 TMIGD2Q96BF3 282 aa10.56□□□□□ -0.72
MSH6-201ENST00000234420 APMAPQ9HDC9 416 aa10.56□□□□□ -0.72
MSH6-201ENST00000234420 KLHL9Q9P2J3 617 aa10.56□□□□□ -0.72
MSH6-201ENST00000234420 KRBOX1C9JBD0 128 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms