RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 HOXB3P14651 431 aaPredicted RBP13.34□□□□□ -0.27
PCDHB3-201ENST00000231130 BUD31P41223 144 aaPredicted RBP13.34□□□□□ -0.27
PCDHB3-201ENST00000231130 CENPAP49450 140 aa13.34□□□□□ -0.27
PCDHB3-201ENST00000231130 DGKGP49619 791 aa13.34□□□□□ -0.27
PCDHB3-201ENST00000231130 CCR6P51684 374 aa13.34□□□□□ -0.27
PCDHB3-201ENST00000231130 SYT14P1Q58G82 188 aa13.34□□□□□ -0.27
PCDHB3-201ENST00000231130 ZFP82Q8N141 532 aa13.34□□□□□ -0.27
PCDHB3-201ENST00000231130 HHIPQ96QV1 700 aa13.34□□□□□ -0.27
PCDHB3-201ENST00000231130 THAP7Q9BT49 309 aaPredicted RBP13.34□□□□□ -0.27
PCDHB3-201ENST00000231130 ARHGAP39Q9C0H5 1083 aa13.34□□□□□ -0.27
PCDHB3-201ENST00000231130 EMC7Q9NPA0 242 aa13.34□□□□□ -0.27
PCDHB3-201ENST00000231130 THSD1Q9NS62 852 aa13.34□□□□□ -0.27
PCDHB3-201ENST00000231130 LYARQ9NX58 379 aaKnown RBP13.34□□□□□ -0.27
PCDHB3-201ENST00000231130 LRFN2Q9ULH4 789 aa13.34□□□□□ -0.27
PCDHB3-201ENST00000231130 PLAGL1Q9UM63 463 aa13.34□□□□□ -0.27
PCDHB3-201ENST00000231130 C5orf42Q9H799 3197 aa13.34□□□□□ -0.27
PCDHB3-201ENST00000231130 ANHXE9PGG2 379 aa13.34□□□□□ -0.27
PCDHB3-201ENST00000231130 E9PQ18 207 aa13.34□□□□□ -0.27
PCDHB3-201ENST00000231130 NDUFS6O75380 124 aaKnown RBP13.34□□□□□ -0.27
PCDHB3-201ENST00000231130 LALBAP00709 142 aa13.34□□□□□ -0.27
PCDHB3-201ENST00000231130 PRPH2P23942 346 aa13.34□□□□□ -0.27
PCDHB3-201ENST00000231130 CNTN1Q12860 1018 aa13.34□□□□□ -0.27
PCDHB3-201ENST00000231130 MBTPS1Q14703 1052 aa13.34□□□□□ -0.27
PCDHB3-201ENST00000231130 ZNF630Q2M218 657 aaPredicted RBP13.34□□□□□ -0.27
PCDHB3-201ENST00000231130 SFRP5Q5T4F7 317 aa13.34□□□□□ -0.27
PCDHB3-201ENST00000231130 ZNF730Q6ZMV8 503 aa13.34□□□□□ -0.27
PCDHB3-201ENST00000231130 CHST14Q8NCH0 376 aa13.34□□□□□ -0.27
PCDHB3-201ENST00000231130 C16orf78Q8WTQ4 265 aa13.34□□□□□ -0.27
PCDHB3-201ENST00000231130 RFT1Q96AA3 541 aa13.34□□□□□ -0.27
PCDHB3-201ENST00000231130 FNDC11Q9BVV2 318 aa13.34□□□□□ -0.27
PCDHB3-201ENST00000231130 CACNG6Q9BXT2 260 aa13.34□□□□□ -0.27
PCDHB3-201ENST00000231130 DPAGT1Q9H3H5 408 aa13.34□□□□□ -0.27
PCDHB3-201ENST00000231130 MTG2Q9H4K7 406 aa13.34□□□□□ -0.27
PCDHB3-201ENST00000231130 DPP7Q9UHL4 492 aa13.34□□□□□ -0.27
PCDHB3-201ENST00000231130 TO15178 435 aa13.34□□□□□ -0.27
PCDHB3-201ENST00000231130 S100A9P06702 114 aaKnown RBP13.34□□□□□ -0.27
PCDHB3-201ENST00000231130 OR12D1P0DN82 309 aa13.34□□□□□ -0.27
PCDHB3-201ENST00000231130 AP1S2P56377 157 aa13.34□□□□□ -0.27
PCDHB3-201ENST00000231130 WNT4P56705 351 aa13.34□□□□□ -0.27
PCDHB3-201ENST00000231130 MZT2AQ6P582 158 aa13.34□□□□□ -0.27
PCDHB3-201ENST00000231130 Q6ZVU0 165 aa13.34□□□□□ -0.27
PCDHB3-201ENST00000231130 CMTM8Q8IZV2 173 aa13.34□□□□□ -0.27
PCDHB3-201ENST00000231130 CLDN22Q8N7P3 220 aa13.34□□□□□ -0.27
PCDHB3-201ENST00000231130 ZNF454Q8N9F8 522 aa13.34□□□□□ -0.27
PCDHB3-201ENST00000231130 ZNF527Q8NB42 609 aa13.34□□□□□ -0.27
PCDHB3-201ENST00000231130 OR2AP1Q8NGE2 309 aa13.34□□□□□ -0.27
PCDHB3-201ENST00000231130 CHTF18Q8WVB6 975 aa13.34□□□□□ -0.27
PCDHB3-201ENST00000231130 PLD4Q96BZ4 506 aa13.34□□□□□ -0.27
PCDHB3-201ENST00000231130 LRRC46Q96FV0 321 aa13.34□□□□□ -0.27
PCDHB3-201ENST00000231130 IL17FQ96PD4 163 aa13.34□□□□□ -0.27
PCDHB3-201ENST00000231130 QRSL1Q9H0R6 528 aaKnown RBP13.34□□□□□ -0.27
PCDHB3-201ENST00000231130 KLHL1Q9NR64 748 aa13.34□□□□□ -0.27
PCDHB3-201ENST00000231130 MRPL15Q9P015 296 aaKnown RBP13.34□□□□□ -0.27
PCDHB3-201ENST00000231130 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.33□□□□□ -0.28
PCDHB3-201ENST00000231130 ADAP00813 363 aa13.33□□□□□ -0.28
PCDHB3-201ENST00000231130 CATP04040 527 aaKnown RBP13.33□□□□□ -0.28
PCDHB3-201ENST00000231130 RD3LP0DJH9 198 aa13.33□□□□□ -0.28
PCDHB3-201ENST00000231130 MEOX2P50222 304 aa13.33□□□□□ -0.28
PCDHB3-201ENST00000231130 LMAN2Q12907 356 aa13.33□□□□□ -0.28
PCDHB3-201ENST00000231130 SYPL1Q16563 259 aa13.33□□□□□ -0.28
PCDHB3-201ENST00000231130 CDKN3Q16667 212 aa13.33□□□□□ -0.28
PCDHB3-201ENST00000231130 SPIN4Q56A73 249 aa13.33□□□□□ -0.28
PCDHB3-201ENST00000231130 PGBD2Q6P3X8 592 aa13.33□□□□□ -0.28
PCDHB3-201ENST00000231130 PODNL1Q6PEZ8 512 aa13.33□□□□□ -0.28
PCDHB3-201ENST00000231130 GPR32P1Q8NGA4 272 aa13.33□□□□□ -0.28
PCDHB3-201ENST00000231130 MSLNLQ96KJ4 702 aa13.33□□□□□ -0.28
PCDHB3-201ENST00000231130 RIOK2Q9BVS4 552 aaKnown RBP13.33□□□□□ -0.28
PCDHB3-201ENST00000231130 PLA2G12AQ9BZM1 189 aa13.33□□□□□ -0.28
PCDHB3-201ENST00000231130 SUV39H2Q9H5I1 410 aa13.33□□□□□ -0.28
PCDHB3-201ENST00000231130 CNIH4Q9P003 139 aa13.33□□□□□ -0.28
PCDHB3-201ENST00000231130 PTGFRNQ9P2B2 879 aa13.33□□□□□ -0.28
PCDHB3-201ENST00000231130 ZFR2Q9UPR6 939 aaKnown RBP13.33□□□□□ -0.28
PCDHB3-201ENST00000231130 AUP1Q9Y679 476 aa13.33□□□□□ -0.28
PCDHB3-201ENST00000231130 ARID1BQ8NFD5 2236 aaPredicted RBP13.33□□□□□ -0.28
PCDHB3-201ENST00000231130 SHISA3A0PJX4 238 aa13.33□□□□□ -0.28
PCDHB3-201ENST00000231130 GFYI3L273 518 aa13.33□□□□□ -0.28
PCDHB3-201ENST00000231130 GPR37L1O60883 481 aa13.33□□□□□ -0.28
PCDHB3-201ENST00000231130 RECKO95980 971 aa13.33□□□□□ -0.28
PCDHB3-201ENST00000231130 HMGN1P05114 100 aa13.33□□□□□ -0.28
PCDHB3-201ENST00000231130 CD3GP09693 182 aa13.33□□□□□ -0.28
PCDHB3-201ENST00000231130 FURINP09958 794 aa13.33□□□□□ -0.28
PCDHB3-201ENST00000231130 IMPA1P29218 277 aa13.33□□□□□ -0.28
PCDHB3-201ENST00000231130 WDR5P61964 334 aaKnown RBP13.33□□□□□ -0.28
PCDHB3-201ENST00000231130 ILKQ13418 452 aa13.33□□□□□ -0.28
PCDHB3-201ENST00000231130 COL19A1Q14993 1142 aa13.33□□□□□ -0.28
PCDHB3-201ENST00000231130 RAET1GQ6H3X3 334 aa13.33□□□□□ -0.28
PCDHB3-201ENST00000231130 OR4K5Q8NGD3 323 aa13.33□□□□□ -0.28
PCDHB3-201ENST00000231130 AUTS2Q8WXX7 1259 aa13.33□□□□□ -0.28
PCDHB3-201ENST00000231130 MS4A3Q96HJ5 214 aa13.33□□□□□ -0.28
PCDHB3-201ENST00000231130 GPA33Q99795 319 aa13.33□□□□□ -0.28
PCDHB3-201ENST00000231130 ELAC1Q9H777 363 aaKnown RBP13.33□□□□□ -0.28
PCDHB3-201ENST00000231130 WDPCPO95876 746 aa13.32□□□□□ -0.28
PCDHB3-201ENST00000231130 ACADLP28330 430 aa13.32□□□□□ -0.28
PCDHB3-201ENST00000231130 GIPRP48546 466 aa13.32□□□□□ -0.28
PCDHB3-201ENST00000231130 PXNP49023 591 aaPredicted RBP13.32□□□□□ -0.28
PCDHB3-201ENST00000231130 SLC16A1P53985 500 aa13.32□□□□□ -0.28
PCDHB3-201ENST00000231130 CORO6Q6QEF8 472 aa13.32□□□□□ -0.28
PCDHB3-201ENST00000231130 TFAP2EQ6VUC0 442 aa13.32□□□□□ -0.28
PCDHB3-201ENST00000231130 RNF165Q6ZSG1 346 aa13.32□□□□□ -0.28
PCDHB3-201ENST00000231130 SLC16A13Q7RTY0 426 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms