RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 DOLPP1Q86YN1 238 aa12.56□□□□□ -0.4
VEGFA-201ENST00000230480 SLC44A2Q8IWA5 706 aaPredicted RBP12.56□□□□□ -0.4
VEGFA-201ENST00000230480 CLEC4FQ8N1N0 589 aa12.56□□□□□ -0.4
VEGFA-201ENST00000230480 SLC16A11Q8NCK7 471 aa12.56□□□□□ -0.4
VEGFA-201ENST00000230480 FAM13CQ8NE31 585 aa12.56□□□□□ -0.4
VEGFA-201ENST00000230480 CKAP2Q8WWK9 683 aa12.56□□□□□ -0.4
VEGFA-201ENST00000230480 PIK3R3Q92569 461 aa12.56□□□□□ -0.4
VEGFA-201ENST00000230480 OTUB1Q96FW1 271 aaPredicted RBP12.56□□□□□ -0.4
VEGFA-201ENST00000230480 C7orf26Q96N11 449 aa12.56□□□□□ -0.4
VEGFA-201ENST00000230480 SECISBP2Q96T21 854 aaKnown RBP12.56□□□□□ -0.4
VEGFA-201ENST00000230480 KLHDC3Q9BQ90 382 aa12.56□□□□□ -0.4
VEGFA-201ENST00000230480 EBF4Q9BQW3 602 aa12.56□□□□□ -0.4
VEGFA-201ENST00000230480 ZNF703Q9H7S9 590 aaPredicted RBP12.56□□□□□ -0.4
VEGFA-201ENST00000230480 GALNT9Q9HCQ5 603 aa12.56□□□□□ -0.4
VEGFA-201ENST00000230480 NOP53Q9NZM5 478 aaKnown RBP12.56□□□□□ -0.4
VEGFA-201ENST00000230480 CNIH4Q9P003 139 aa12.56□□□□□ -0.4
VEGFA-201ENST00000230480 CFL2Q9Y281 166 aa12.56□□□□□ -0.4
VEGFA-201ENST00000230480 A0A1W2PRB8 838 aa12.55□□□□□ -0.4
VEGFA-201ENST00000230480 OR6C70A6NIJ9 312 aa12.55□□□□□ -0.4
VEGFA-201ENST00000230480 LRRTM2O43300 516 aa12.55□□□□□ -0.4
VEGFA-201ENST00000230480 ICOSLGO75144 302 aa12.55□□□□□ -0.4
VEGFA-201ENST00000230480 P04436 131 aa12.55□□□□□ -0.4
VEGFA-201ENST00000230480 CYP4B1P13584 511 aa12.55□□□□□ -0.4
VEGFA-201ENST00000230480 MAPK1P28482 360 aa12.55□□□□□ -0.4
VEGFA-201ENST00000230480 PTPN6P29350 595 aa12.55□□□□□ -0.4
VEGFA-201ENST00000230480 NTSP30990 170 aa12.55□□□□□ -0.4
VEGFA-201ENST00000230480 CA7P43166 264 aa12.55□□□□□ -0.4
VEGFA-201ENST00000230480 MANFP55145 182 aaKnown RBP12.55□□□□□ -0.4
VEGFA-201ENST00000230480 DUSP5Q16690 384 aa12.55□□□□□ -0.4
VEGFA-201ENST00000230480 C4orf17Q53FE4 359 aa12.55□□□□□ -0.4
VEGFA-201ENST00000230480 SPANXN4Q5MJ08 99 aa12.55□□□□□ -0.4
VEGFA-201ENST00000230480 CPTPQ5TA50 214 aa12.55□□□□□ -0.4
VEGFA-201ENST00000230480 ATG16L1Q676U5 607 aa12.55□□□□□ -0.4
VEGFA-201ENST00000230480 MFSD12Q6NUT3 480 aa12.55□□□□□ -0.4
VEGFA-201ENST00000230480 R3HCC1LQ7Z5L2 792 aaKnown RBP12.55□□□□□ -0.4
VEGFA-201ENST00000230480 SPPL2CQ8IUH8 684 aa12.55□□□□□ -0.4
VEGFA-201ENST00000230480 DND1Q8IYX4 353 aaKnown RBP12.55□□□□□ -0.4
VEGFA-201ENST00000230480 RPRMLQ8N4K4 120 aa12.55□□□□□ -0.4
VEGFA-201ENST00000230480 MARVELD2Q8N4S9 558 aa12.55□□□□□ -0.4
VEGFA-201ENST00000230480 NUP43Q8NFH3 380 aa12.55□□□□□ -0.4
VEGFA-201ENST00000230480 OR8J2Q8NGG1 315 aa12.55□□□□□ -0.4
VEGFA-201ENST00000230480 PIWIL2Q8TC59 973 aaKnown RBP12.55□□□□□ -0.4
VEGFA-201ENST00000230480 ACTRT2Q8TDY3 377 aa12.55□□□□□ -0.4
VEGFA-201ENST00000230480 OR5P2Q8WZ92 322 aa12.55□□□□□ -0.4
VEGFA-201ENST00000230480 DIO2Q92813 273 aa12.55□□□□□ -0.4
VEGFA-201ENST00000230480 EFHD2Q96C19 240 aaPredicted RBP12.55□□□□□ -0.4
VEGFA-201ENST00000230480 ZBED6CLQ96FA7 236 aaPredicted RBP12.55□□□□□ -0.4
VEGFA-201ENST00000230480 RILPQ96NA2 401 aa12.55□□□□□ -0.4
VEGFA-201ENST00000230480 GNRHR2Q96P88 292 aa12.55□□□□□ -0.4
VEGFA-201ENST00000230480 PHF12Q96QT6 1004 aa12.55□□□□□ -0.4
VEGFA-201ENST00000230480 ADOQ96SZ5 270 aa12.55□□□□□ -0.4
VEGFA-201ENST00000230480 DUSP26Q9BV47 211 aa12.55□□□□□ -0.4
VEGFA-201ENST00000230480 ZFP64Q9NPA5 681 aa12.55□□□□□ -0.4
VEGFA-201ENST00000230480 SLC52A3Q9NQ40 469 aa12.55□□□□□ -0.4
VEGFA-201ENST00000230480 RYDENQ9NUL5 291 aaKnown RBP12.55□□□□□ -0.4
VEGFA-201ENST00000230480 TAS2R9Q9NYW1 312 aa12.55□□□□□ -0.4
VEGFA-201ENST00000230480 SPRR3Q9UBC9 169 aa12.55□□□□□ -0.4
VEGFA-201ENST00000230480 TNFRSF10DQ9UBN6 386 aa12.55□□□□□ -0.4
VEGFA-201ENST00000230480 TINAGQ9UJW2 476 aa12.55□□□□□ -0.4
VEGFA-201ENST00000230480 EIF3LQ9Y262 564 aaKnown RBP12.55□□□□□ -0.4
VEGFA-201ENST00000230480 ARHGAP21Q5T5U3 1957 aa12.55□□□□□ -0.4
VEGFA-201ENST00000230480 UNC79Q9P2D8 2635 aa12.54□□□□□ -0.4
VEGFA-201ENST00000230480 EMC8O43402 210 aa12.54□□□□□ -0.4
VEGFA-201ENST00000230480 SLC19A2O60779 497 aa12.54□□□□□ -0.4
VEGFA-201ENST00000230480 REM1O75628 298 aa12.54□□□□□ -0.4
VEGFA-201ENST00000230480 CLDN1O95832 211 aa12.54□□□□□ -0.4
VEGFA-201ENST00000230480 GABRA3P34903 492 aa12.54□□□□□ -0.4
VEGFA-201ENST00000230480 DGKQP52824 942 aa12.54□□□□□ -0.4
VEGFA-201ENST00000230480 PNLIPRP2P54317 469 aa12.54□□□□□ -0.4
VEGFA-201ENST00000230480 NME5P56597 212 aa12.54□□□□□ -0.4
VEGFA-201ENST00000230480 ADORA2A-AS1P86434 159 aa12.54□□□□□ -0.4
VEGFA-201ENST00000230480 PLCXD2Q0VAA5 305 aa12.54□□□□□ -0.4
VEGFA-201ENST00000230480 LSM12Q3MHD2 195 aaKnown RBP12.54□□□□□ -0.4
VEGFA-201ENST00000230480 BNC2Q6ZN30 1099 aaPredicted RBP12.54□□□□□ -0.4
VEGFA-201ENST00000230480 RGS9BPQ6ZS82 235 aa12.54□□□□□ -0.4
VEGFA-201ENST00000230480 TRILQ7L0X0 811 aa12.54□□□□□ -0.4
VEGFA-201ENST00000230480 TESCQ96BS2 214 aa12.54□□□□□ -0.4
VEGFA-201ENST00000230480 MARK4Q96L34 752 aa12.54□□□□□ -0.4
VEGFA-201ENST00000230480 COL21A1Q96P44 957 aa12.54□□□□□ -0.4
VEGFA-201ENST00000230480 DMRTA2Q96SC8 542 aa12.54□□□□□ -0.4
VEGFA-201ENST00000230480 BHLHE41Q9C0J9 482 aaPredicted RBP12.54□□□□□ -0.4
VEGFA-201ENST00000230480 CXorf56Q9H5V9 222 aa12.54□□□□□ -0.4
VEGFA-201ENST00000230480 SERHLQ9NQF3 203 aa12.54□□□□□ -0.4
VEGFA-201ENST00000230480 SLC6A13Q9NSD5 602 aa12.54□□□□□ -0.4
VEGFA-201ENST00000230480 DDX18Q9NVP1 670 aaKnown RBP12.54□□□□□ -0.4
VEGFA-201ENST00000230480 USH1CQ9Y6N9 552 aa12.54□□□□□ -0.4
VEGFA-201ENST00000230480 PKDREJQ9NTG1 2253 aa12.53□□□□□ -0.4
VEGFA-201ENST00000230480 PRAMEF27A3QJZ7 478 aa12.53□□□□□ -0.4
VEGFA-201ENST00000230480 TFECO14948 347 aaPredicted RBP12.53□□□□□ -0.4
VEGFA-201ENST00000230480 SNPHO15079 494 aa12.53□□□□□ -0.4
VEGFA-201ENST00000230480 IL33O95760 270 aa12.53□□□□□ -0.4
VEGFA-201ENST00000230480 HMGN2P05204 90 aaKnown RBP12.53□□□□□ -0.4
VEGFA-201ENST00000230480 HPCAL1P37235 193 aa12.53□□□□□ -0.4
VEGFA-201ENST00000230480 IDH3AP50213 366 aa12.53□□□□□ -0.4
VEGFA-201ENST00000230480 ZNF155Q12901 538 aaPredicted RBP12.53□□□□□ -0.4
VEGFA-201ENST00000230480 MAD2L1Q13257 205 aaPredicted RBP12.53□□□□□ -0.4
VEGFA-201ENST00000230480 CYP27C1Q4G0S4 372 aa12.53□□□□□ -0.4
VEGFA-201ENST00000230480 C6orf163Q5TEZ5 329 aa12.53□□□□□ -0.4
VEGFA-201ENST00000230480 TIGD3Q6B0B8 471 aa12.53□□□□□ -0.4
VEGFA-201ENST00000230480 HIST2H2BCQ6DN03 193 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms