RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 LRRN3Q9H3W5 708 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 TXNL4BQ9NX01 149 aaKnown RBP12.98□□□□□ -0.33
NFKB1-201ENST00000226574 MARCH5Q9NX47 278 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 CKLFQ9UBR5 152 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 PLEKHA6Q9Y2H5 1048 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 CLDN4O14493 209 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 KMOO15229 486 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 H2AFB2P0C5Z0 115 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 TIMP2P16035 220 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 ZNF24P17028 368 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 CR2P20023 1033 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 GDI1P31150 447 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 C1orf61Q13536 156 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 ENPP2Q13822 863 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 OR4C11Q6IEV9 310 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 GAREM2Q75VX8 874 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 NAXEQ8NCW5 288 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 SUN3Q8TAQ9 357 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 SLC25A18Q9H1K4 315 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 SYNPO2LQ9H987 977 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 MUTYHQ9UIF7 546 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 SLC7A7Q9UM01 511 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 C13orf42A0A1B0GVH6 325 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 SSX4O60224 188 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 PLATP00750 562 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 MAS1P04201 325 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 CHRNEQ04844 493 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 GAS6Q14393 721 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 GLCCI1Q86VQ1 547 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 LINC00471Q8N535 108 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 TTLQ8NG68 377 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 OR6N2Q8NGY6 317 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 SLC7A13Q8TCU3 470 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 ALG8Q9BVK2 526 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 COMMD4Q9H0A8 199 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 SLC6A15Q9H2J7 730 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 EXO5Q9H790 373 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 OR6C2Q9NZP2 312 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 ZNFX1Q9P2E3 1918 aaKnown RBP12.98□□□□□ -0.33
NFKB1-201ENST00000226574 SVILO95425 2214 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 PRODHO43272 600 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 C1orf105O95561 183 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 C1QCP02747 245 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 MAGEA2P43356 314 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 DEFB103AP81534 67 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 PRKCDQ05655 676 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 DEFB110Q30KQ9 67 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 ZNF385BQ569K4 471 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 MSANTD1Q6ZTZ1 278 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 PARS2Q7L3T8 475 aaKnown RBP12.98□□□□□ -0.33
NFKB1-201ENST00000226574 OR2A12Q8NGT7 310 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 THAP7Q9BT49 309 aaPredicted RBP12.98□□□□□ -0.33
NFKB1-201ENST00000226574 PNO1Q9NRX1 252 aaKnown RBP12.98□□□□□ -0.33
NFKB1-201ENST00000226574 MED11Q9P086 117 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 ATXN7L1Q9ULK2 861 aaPredicted RBP12.98□□□□□ -0.33
NFKB1-201ENST00000226574 BACE2Q9Y5Z0 518 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 CDH10Q9Y6N8 788 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 RREB1Q92766 1687 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 HMX3A6NHT5 357 aa12.97□□□□□ -0.33
NFKB1-201ENST00000226574 ARAFP10398 606 aa12.97□□□□□ -0.33
NFKB1-201ENST00000226574 PEPDP12955 493 aa12.97□□□□□ -0.33
NFKB1-201ENST00000226574 DDCP20711 480 aa12.97□□□□□ -0.33
NFKB1-201ENST00000226574 MAP3K8P41279 467 aa12.97□□□□□ -0.33
NFKB1-201ENST00000226574 CLDN12P56749 244 aa12.97□□□□□ -0.33
NFKB1-201ENST00000226574 CCDC58Q4VC31 144 aa12.97□□□□□ -0.33
NFKB1-201ENST00000226574 HSD17B12Q53GQ0 312 aa12.97□□□□□ -0.33
NFKB1-201ENST00000226574 BTN2A1Q7KYR7 527 aa12.97□□□□□ -0.33
NFKB1-201ENST00000226574 OR6T1Q8NGN1 323 aa12.97□□□□□ -0.33
NFKB1-201ENST00000226574 OR5J2Q8NH18 312 aa12.97□□□□□ -0.33
NFKB1-201ENST00000226574 S100A16Q96FQ6 103 aaKnown RBP12.97□□□□□ -0.33
NFKB1-201ENST00000226574 BCL2L14Q9BZR8 327 aa12.97□□□□□ -0.33
NFKB1-201ENST00000226574 PRDM9Q9NQV7 894 aa12.97□□□□□ -0.33
NFKB1-201ENST00000226574 TMEM45AQ9NWC5 275 aa12.97□□□□□ -0.33
NFKB1-201ENST00000226574 MED16Q9Y2X0 877 aa12.97□□□□□ -0.33
NFKB1-201ENST00000226574 MAB21L2Q9Y586 359 aa12.97□□□□□ -0.33
NFKB1-201ENST00000226574 PAPPAQ13219 1627 aa12.97□□□□□ -0.33
NFKB1-201ENST00000226574 STRCP1A6NGW2 1772 aa12.97□□□□□ -0.33
NFKB1-201ENST00000226574 EMC8O43402 210 aa12.97□□□□□ -0.33
NFKB1-201ENST00000226574 PRSS23O95084 383 aa12.97□□□□□ -0.33
NFKB1-201ENST00000226574 APEHP13798 732 aaKnown RBP12.97□□□□□ -0.33
NFKB1-201ENST00000226574 NRIP1P48552 1158 aa12.97□□□□□ -0.33
NFKB1-201ENST00000226574 SLCO4C1Q6ZQN7 724 aa12.97□□□□□ -0.33
NFKB1-201ENST00000226574 USP51Q70EK9 711 aa12.97□□□□□ -0.33
NFKB1-201ENST00000226574 PAQR7Q86WK9 346 aa12.97□□□□□ -0.33
NFKB1-201ENST00000226574 L3MBTL4Q8NA19 623 aa12.97□□□□□ -0.33
NFKB1-201ENST00000226574 POGLUT1Q8NBL1 392 aa12.97□□□□□ -0.33
NFKB1-201ENST00000226574 OR10H5Q8NGA6 315 aa12.97□□□□□ -0.33
NFKB1-201ENST00000226574 SPATA9Q9BWV2 254 aa12.97□□□□□ -0.33
NFKB1-201ENST00000226574 PDFQ9HBH1 243 aa12.97□□□□□ -0.33
NFKB1-201ENST00000226574 TM7SF3Q9NS93 570 aa12.97□□□□□ -0.33
NFKB1-201ENST00000226574 PRKYO43930 277 aa12.97□□□□□ -0.33
NFKB1-201ENST00000226574 CSO75390 466 aaKnown RBP12.97□□□□□ -0.33
NFKB1-201ENST00000226574 ITGA10O75578 1167 aa12.97□□□□□ -0.33
NFKB1-201ENST00000226574 PPP1R3DO95685 299 aa12.97□□□□□ -0.33
NFKB1-201ENST00000226574 SERPINA3P01011 423 aa12.97□□□□□ -0.33
NFKB1-201ENST00000226574 HOXD8P13378 290 aaPredicted RBP12.97□□□□□ -0.33
NFKB1-201ENST00000226574 ARFIP1P53367 373 aa12.97□□□□□ -0.33
NFKB1-201ENST00000226574 DBPQ10586 325 aaPredicted RBP12.97□□□□□ -0.33
NFKB1-201ENST00000226574 KCTD9Q7L273 389 aa12.97□□□□□ -0.33
NFKB1-201ENST00000226574 TMC8Q8IU68 726 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms