RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 PIGGQ5H8A4 983 aa12.55□□□□□ -0.4
COL1A1-201ENST00000225964 BORAQ6PGQ7 559 aa12.55□□□□□ -0.4
COL1A1-201ENST00000225964 SYT14Q8NB59 555 aa12.55□□□□□ -0.4
COL1A1-201ENST00000225964 PLEKHO2Q8TD55 490 aa12.55□□□□□ -0.4
COL1A1-201ENST00000225964 ATOH1Q92858 354 aaPredicted RBP12.55□□□□□ -0.4
COL1A1-201ENST00000225964 TMEM19Q96HH6 336 aa12.55□□□□□ -0.4
COL1A1-201ENST00000225964 SSX3Q99909 188 aa12.55□□□□□ -0.4
COL1A1-201ENST00000225964 MEPEQ9NQ76 525 aaPredicted RBP12.55□□□□□ -0.4
COL1A1-201ENST00000225964 STUB1Q9UNE7 303 aa12.55□□□□□ -0.4
COL1A1-201ENST00000225964 PIK3C2AO00443 1686 aa12.55□□□□□ -0.4
COL1A1-201ENST00000225964 RAD1O60671 282 aa12.55□□□□□ -0.4
COL1A1-201ENST00000225964 SLC16A8O95907 504 aa12.55□□□□□ -0.4
COL1A1-201ENST00000225964 ZNF33BQ06732 778 aa12.55□□□□□ -0.4
COL1A1-201ENST00000225964 MANEAQ5SRI9 462 aa12.55□□□□□ -0.4
COL1A1-201ENST00000225964 HES5Q5TA89 166 aa12.55□□□□□ -0.4
COL1A1-201ENST00000225964 ZNF695Q8IW36 515 aa12.55□□□□□ -0.4
COL1A1-201ENST00000225964 PHC2Q8IXK0 858 aa12.55□□□□□ -0.4
COL1A1-201ENST00000225964 CCDC71LQ8N9Z2 235 aa12.55□□□□□ -0.4
COL1A1-201ENST00000225964 DDX1Q92499 740 aaKnown RBP12.55□□□□□ -0.4
COL1A1-201ENST00000225964 SOX17Q9H6I2 414 aaPredicted RBP12.55□□□□□ -0.4
COL1A1-201ENST00000225964 SPEF2Q9C093 1822 aa12.55□□□□□ -0.4
COL1A1-201ENST00000225964 FAM230AA0A1W2PPH8 454 aa12.55□□□□□ -0.4
COL1A1-201ENST00000225964 INMT-MINDY4F8WBC2 141 aa12.55□□□□□ -0.4
COL1A1-201ENST00000225964 LCKP06239 509 aa12.55□□□□□ -0.4
COL1A1-201ENST00000225964 GABRA2P47869 451 aa12.55□□□□□ -0.4
COL1A1-201ENST00000225964 NKX3-2P78367 333 aa12.55□□□□□ -0.4
COL1A1-201ENST00000225964 NPY5RQ15761 445 aa12.55□□□□□ -0.4
COL1A1-201ENST00000225964 VHLLQ6RSH7 139 aa12.55□□□□□ -0.4
COL1A1-201ENST00000225964 Q8N402 240 aa12.55□□□□□ -0.4
COL1A1-201ENST00000225964 PEX13Q92968 403 aa12.55□□□□□ -0.4
COL1A1-201ENST00000225964 MAL2Q969L2 176 aa12.55□□□□□ -0.4
COL1A1-201ENST00000225964 ZNF681Q96N22 645 aa12.55□□□□□ -0.4
COL1A1-201ENST00000225964 MS4A4EQ96PG1 132 aa12.55□□□□□ -0.4
COL1A1-201ENST00000225964 ST6GALNAC5Q9BVH7 336 aa12.55□□□□□ -0.4
COL1A1-201ENST00000225964 PAK1IP1Q9NWT1 392 aaPredicted RBP12.55□□□□□ -0.4
COL1A1-201ENST00000225964 PISDQ9UG56 409 aa12.55□□□□□ -0.4
COL1A1-201ENST00000225964 HSPB11Q9Y547 144 aa12.55□□□□□ -0.4
COL1A1-201ENST00000225964 MYOM1P52179 1685 aa12.55□□□□□ -0.4
COL1A1-201ENST00000225964 CD34P28906 385 aa12.55□□□□□ -0.4
COL1A1-201ENST00000225964 ZNF616Q08AN1 781 aa12.55□□□□□ -0.4
COL1A1-201ENST00000225964 GALNT1Q10472 559 aaPredicted RBP12.55□□□□□ -0.4
COL1A1-201ENST00000225964 BEST3Q8N1M1 668 aa12.55□□□□□ -0.4
COL1A1-201ENST00000225964 UBQLN2Q9UHD9 624 aa12.55□□□□□ -0.4
COL1A1-201ENST00000225964 SULT2B1O00204 365 aa12.54□□□□□ -0.4
COL1A1-201ENST00000225964 HTRA2O43464 458 aaPredicted RBP12.54□□□□□ -0.4
COL1A1-201ENST00000225964 NUDT21O43809 227 aaKnown RBP12.54□□□□□ -0.4
COL1A1-201ENST00000225964 ALDOAP04075 364 aaKnown RBP12.54□□□□□ -0.4
COL1A1-201ENST00000225964 FDXRP22570 491 aa12.54□□□□□ -0.4
COL1A1-201ENST00000225964 TMBIM6P55061 237 aa12.54□□□□□ -0.4
COL1A1-201ENST00000225964 MZT1Q08AG7 82 aa12.54□□□□□ -0.4
COL1A1-201ENST00000225964 DPH1Q9BZG8 443 aa12.54□□□□□ -0.4
COL1A1-201ENST00000225964 ENKD1Q9H0I2 346 aa12.54□□□□□ -0.4
COL1A1-201ENST00000225964 GOSR2O14653 212 aa12.54□□□□□ -0.4
COL1A1-201ENST00000225964 RASAL1O95294 804 aa12.54□□□□□ -0.4
COL1A1-201ENST00000225964 ADAP00813 363 aa12.54□□□□□ -0.4
COL1A1-201ENST00000225964 HTR1EP28566 365 aa12.54□□□□□ -0.4
COL1A1-201ENST00000225964 SLC10A2Q12908 348 aaPredicted RBP12.54□□□□□ -0.4
COL1A1-201ENST00000225964 BCL2A1Q16548 175 aa12.54□□□□□ -0.4
COL1A1-201ENST00000225964 CLLU1OSQ5K130 101 aa12.54□□□□□ -0.4
COL1A1-201ENST00000225964 ENPP6Q6UWR7 440 aa12.54□□□□□ -0.4
COL1A1-201ENST00000225964 NRMQ8IXM6 262 aa12.54□□□□□ -0.4
COL1A1-201ENST00000225964 TTC9BQ8N6N2 239 aa12.54□□□□□ -0.4
COL1A1-201ENST00000225964 MUS81Q96NY9 551 aa12.54□□□□□ -0.4
COL1A1-201ENST00000225964 PHB2Q99623 299 aa12.54□□□□□ -0.4
COL1A1-201ENST00000225964 HDHD5Q9BXW7 423 aa12.54□□□□□ -0.4
COL1A1-201ENST00000225964 UBL4AP11441 157 aa12.54□□□□□ -0.4
COL1A1-201ENST00000225964 TNFRSF1BP20333 461 aa12.54□□□□□ -0.4
COL1A1-201ENST00000225964 ETV5P41161 510 aa12.54□□□□□ -0.4
COL1A1-201ENST00000225964 DCP2Q8IU60 420 aaKnown RBP12.54□□□□□ -0.4
COL1A1-201ENST00000225964 HDAC2Q92769 488 aaKnown RBP12.54□□□□□ -0.4
COL1A1-201ENST00000225964 SAMD8Q96LT4 415 aa12.54□□□□□ -0.4
COL1A1-201ENST00000225964 LIN28AQ9H9Z2 209 aaKnown RBP12.54□□□□□ -0.4
COL1A1-201ENST00000225964 C14orf119Q9NWQ9 140 aa12.54□□□□□ -0.4
COL1A1-201ENST00000225964 A0A0A6YYC8 382 aaPredicted RBP12.54□□□□□ -0.4
COL1A1-201ENST00000225964 I3L1I5 382 aaPredicted RBP12.54□□□□□ -0.4
COL1A1-201ENST00000225964 SNAPC5O75971 98 aa12.54□□□□□ -0.4
COL1A1-201ENST00000225964 SLC6A8P48029 635 aa12.54□□□□□ -0.4
COL1A1-201ENST00000225964 CAMLGP49069 296 aa12.54□□□□□ -0.4
COL1A1-201ENST00000225964 PLCXD3Q63HM9 321 aa12.54□□□□□ -0.4
COL1A1-201ENST00000225964 LIPIQ6XZB0 460 aa12.54□□□□□ -0.4
COL1A1-201ENST00000225964 IQCF1Q8N6M8 205 aa12.54□□□□□ -0.4
COL1A1-201ENST00000225964 KDM1BQ8NB78 822 aa12.54□□□□□ -0.4
COL1A1-201ENST00000225964 GHRLQ9UBU3 117 aa12.54□□□□□ -0.4
COL1A1-201ENST00000225964 STYXL1Q9Y6J8 313 aa12.54□□□□□ -0.4
COL1A1-201ENST00000225964 COL1A1P02452 1464 aaPredicted RBP12.54□□□□□ -0.4
COL1A1-201ENST00000225964 SHPRHQ149N8 1683 aa12.54□□□□□ -0.4
COL1A1-201ENST00000225964 NPIPA5A0A0B4J1W7 369 aa12.54□□□□□ -0.4
COL1A1-201ENST00000225964 TRAPPC13A5PLN9 417 aa12.54□□□□□ -0.4
COL1A1-201ENST00000225964 NPIPA7E9PJI5 369 aa12.54□□□□□ -0.4
COL1A1-201ENST00000225964 LDB3O75112 727 aa12.54□□□□□ -0.4
COL1A1-201ENST00000225964 STSP08842 583 aa12.54□□□□□ -0.4
COL1A1-201ENST00000225964 NPIPA8P0DM63 369 aa12.54□□□□□ -0.4
COL1A1-201ENST00000225964 CAPN3P20807 821 aa12.54□□□□□ -0.4
COL1A1-201ENST00000225964 IL32P24001 234 aa12.54□□□□□ -0.4
COL1A1-201ENST00000225964 TBRG1Q3YBR2 411 aa12.54□□□□□ -0.4
COL1A1-201ENST00000225964 TMEM130Q8N3G9 435 aa12.54□□□□□ -0.4
COL1A1-201ENST00000225964 MTG2Q9H4K7 406 aa12.54□□□□□ -0.4
COL1A1-201ENST00000225964 AIG1Q9NVV5 245 aa12.54□□□□□ -0.4
COL1A1-201ENST00000225964 TMX2-CTNND1H3BSU7 103 aa12.53□□□□□ -0.4
COL1A1-201ENST00000225964 ZNF14P17017 642 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms