RNA–Protein interactions for RNA: ENST00000225519.3

SHPK-201, Transcript of sedoheptulokinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHPK, Length 3,838 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPK-201ENST00000225519 MYNNQ9NPC7 610 aa13.4□□□□□ -0.26
SHPK-201ENST00000225519 CD93Q9NPY3 652 aa13.4□□□□□ -0.26
SHPK-201ENST00000225519 ALPK3Q96L96 1907 aa13.39□□□□□ -0.27
SHPK-201ENST00000225519 CHURC1-FNTBB4DL54 471 aa13.39□□□□□ -0.27
SHPK-201ENST00000225519 MID1O15344 667 aa13.39□□□□□ -0.27
SHPK-201ENST00000225519 RBMS1P29558 406 aaKnown RBP13.39□□□□□ -0.27
SHPK-201ENST00000225519 SREBF2Q12772 1141 aa13.39□□□□□ -0.27
SHPK-201ENST00000225519 CLLU1OSQ5K130 101 aa13.39□□□□□ -0.27
SHPK-201ENST00000225519 SFRP4Q6FHJ7 346 aaPredicted RBP13.39□□□□□ -0.27
SHPK-201ENST00000225519 WASH2PQ6VEQ5 465 aa13.39□□□□□ -0.27
SHPK-201ENST00000225519 ADAMTS14Q8WXS8 1223 aa13.39□□□□□ -0.27
SHPK-201ENST00000225519 SFXN2Q96NB2 322 aa13.39□□□□□ -0.27
SHPK-201ENST00000225519 ABHD1Q96SE0 405 aa13.39□□□□□ -0.27
SHPK-201ENST00000225519 IMPA1P29218 277 aa13.39□□□□□ -0.27
SHPK-201ENST00000225519 TPMTP51580 245 aa13.39□□□□□ -0.27
SHPK-201ENST00000225519 SLC3A1Q07837 685 aa13.39□□□□□ -0.27
SHPK-201ENST00000225519 TUSC1Q2TAM9 212 aa13.39□□□□□ -0.27
SHPK-201ENST00000225519 CD200R1LQ6Q8B3 271 aa13.39□□□□□ -0.27
SHPK-201ENST00000225519 MOSPD2Q8NHP6 518 aa13.39□□□□□ -0.27
SHPK-201ENST00000225519 ECHDC3Q96DC8 303 aa13.39□□□□□ -0.27
SHPK-201ENST00000225519 ZNF578Q96N58 590 aaPredicted RBP13.39□□□□□ -0.27
SHPK-201ENST00000225519 GPA33Q99795 319 aa13.39□□□□□ -0.27
SHPK-201ENST00000225519 OR51I1Q9H343 314 aa13.39□□□□□ -0.27
SHPK-201ENST00000225519 DMRT3Q9NQL9 472 aa13.39□□□□□ -0.27
SHPK-201ENST00000225519 B4GALT6Q9UBX8 382 aa13.39□□□□□ -0.27
SHPK-201ENST00000225519 TSPAN6O43657 245 aa13.39□□□□□ -0.27
SHPK-201ENST00000225519 MMP20O60882 483 aa13.39□□□□□ -0.27
SHPK-201ENST00000225519 RGS11O94810 467 aa13.39□□□□□ -0.27
SHPK-201ENST00000225519 UBXN7O94888 489 aa13.39□□□□□ -0.27
SHPK-201ENST00000225519 PTNP21246 168 aa13.39□□□□□ -0.27
SHPK-201ENST00000225519 MAZP56270 477 aaKnown RBP13.39□□□□□ -0.27
SHPK-201ENST00000225519 SNRPD1P62314 119 aaKnown RBP13.39□□□□□ -0.27
SHPK-201ENST00000225519 FAM27D1Q5T7N8 215 aa13.39□□□□□ -0.27
SHPK-201ENST00000225519 SLCO4C1Q6ZQN7 724 aa13.39□□□□□ -0.27
SHPK-201ENST00000225519 C11orf96Q7Z7L8 435 aa13.39□□□□□ -0.27
SHPK-201ENST00000225519 OR2AP1Q8NGE2 309 aa13.39□□□□□ -0.27
SHPK-201ENST00000225519 OR8D4Q8NGM9 314 aa13.39□□□□□ -0.27
SHPK-201ENST00000225519 TREX2Q9BQ50 279 aaPredicted RBP13.39□□□□□ -0.27
SHPK-201ENST00000225519 YIPF4Q9BSR8 244 aa13.39□□□□□ -0.27
SHPK-201ENST00000225519 CWH43Q9H720 699 aa13.39□□□□□ -0.27
SHPK-201ENST00000225519 MCCC2Q9HCC0 563 aa13.39□□□□□ -0.27
SHPK-201ENST00000225519 DOCK3Q8IZD9 2030 aa13.38□□□□□ -0.27
SHPK-201ENST00000225519 MEIKINA0A087WXM9 373 aa13.38□□□□□ -0.27
SHPK-201ENST00000225519 LGALS8O00214 317 aa13.38□□□□□ -0.27
SHPK-201ENST00000225519 RTCAO00442 366 aaKnown RBP13.38□□□□□ -0.27
SHPK-201ENST00000225519 FZD7O75084 574 aa13.38□□□□□ -0.27
SHPK-201ENST00000225519 PLATP00750 562 aa13.38□□□□□ -0.27
SHPK-201ENST00000225519 OR10A3P58181 314 aa13.38□□□□□ -0.27
SHPK-201ENST00000225519 TBPL1P62380 186 aa13.38□□□□□ -0.27
SHPK-201ENST00000225519 CDKN3Q16667 212 aa13.38□□□□□ -0.27
SHPK-201ENST00000225519 ZNF783Q6ZMS7 281 aa13.38□□□□□ -0.27
SHPK-201ENST00000225519 OAFQ86UD1 273 aa13.38□□□□□ -0.27
SHPK-201ENST00000225519 SDR16C5Q8N3Y7 309 aa13.38□□□□□ -0.27
SHPK-201ENST00000225519 EFCAB11Q9BUY7 163 aa13.38□□□□□ -0.27
SHPK-201ENST00000225519 SUV39H2Q9H5I1 410 aa13.38□□□□□ -0.27
SHPK-201ENST00000225519 DDX31Q9H8H2 851 aaKnown RBP13.38□□□□□ -0.27
SHPK-201ENST00000225519 SLAMF7Q9NQ25 335 aa13.38□□□□□ -0.27
SHPK-201ENST00000225519 TAAR2Q9P1P5 351 aa13.38□□□□□ -0.27
SHPK-201ENST00000225519 COPZ2Q9P299 210 aa13.38□□□□□ -0.27
SHPK-201ENST00000225519 A4GNTQ9UNA3 340 aa13.38□□□□□ -0.27
SHPK-201ENST00000225519 SYNDIG1LA6NDD5 238 aa13.38□□□□□ -0.27
SHPK-201ENST00000225519 AKR1A1P14550 325 aa13.38□□□□□ -0.27
SHPK-201ENST00000225519 ZP3P21754 424 aa13.38□□□□□ -0.27
SHPK-201ENST00000225519 CDK5Q00535 292 aa13.38□□□□□ -0.27
SHPK-201ENST00000225519 PRSS53Q2L4Q9 553 aa13.38□□□□□ -0.27
SHPK-201ENST00000225519 TCTE1Q5JU00 501 aa13.38□□□□□ -0.27
SHPK-201ENST00000225519 LINC00471Q8N535 108 aa13.38□□□□□ -0.27
SHPK-201ENST00000225519 OR5D16Q8NGK9 328 aa13.38□□□□□ -0.27
SHPK-201ENST00000225519 FAM46AQ96IP4 442 aaKnown RBP13.38□□□□□ -0.27
SHPK-201ENST00000225519 ZNF436Q9C0F3 470 aaPredicted RBP13.38□□□□□ -0.27
SHPK-201ENST00000225519 IFT46Q9NQC8 304 aa13.38□□□□□ -0.27
SHPK-201ENST00000225519 ASB6Q9NWX5 421 aa13.38□□□□□ -0.27
SHPK-201ENST00000225519 CSNK1G3Q9Y6M4 447 aa13.38□□□□□ -0.27
SHPK-201ENST00000225519 NUMA1Q14980 2115 aa13.38□□□□□ -0.27
SHPK-201ENST00000225519 PLXNA4Q9HCM2 1894 aa13.38□□□□□ -0.27
SHPK-201ENST00000225519 KDM4BO94953 1096 aa13.38□□□□□ -0.27
SHPK-201ENST00000225519 TFP02787 698 aa13.38□□□□□ -0.27
SHPK-201ENST00000225519 URODP06132 367 aa13.38□□□□□ -0.27
SHPK-201ENST00000225519 HOXC8P31273 242 aa13.38□□□□□ -0.27
SHPK-201ENST00000225519 PNLIPRP1P54315 467 aa13.38□□□□□ -0.27
SHPK-201ENST00000225519 DGCR2P98153 550 aa13.38□□□□□ -0.27
SHPK-201ENST00000225519 BAMBIQ13145 260 aa13.38□□□□□ -0.27
SHPK-201ENST00000225519 HSD17B12Q53GQ0 312 aa13.38□□□□□ -0.27
SHPK-201ENST00000225519 RTP2Q5QGT7 225 aa13.38□□□□□ -0.27
SHPK-201ENST00000225519 FAM198BQ6UWH4 519 aa13.38□□□□□ -0.27
SHPK-201ENST00000225519 SLITRK4Q8IW52 837 aa13.38□□□□□ -0.27
SHPK-201ENST00000225519 ZNF671Q8TAW3 534 aa13.38□□□□□ -0.27
SHPK-201ENST00000225519 MS4A3Q96HJ5 214 aa13.38□□□□□ -0.27
SHPK-201ENST00000225519 SAV1Q9H4B6 383 aaPredicted RBP13.38□□□□□ -0.27
SHPK-201ENST00000225519 P2RX2Q9UBL9 471 aa13.38□□□□□ -0.27
SHPK-201ENST00000225519 A0A1W2PRQ8 180 aa13.37□□□□□ -0.27
SHPK-201ENST00000225519 KHNYNO15037 678 aaKnown RBP13.37□□□□□ -0.27
SHPK-201ENST00000225519 RNF13O43567 381 aa13.37□□□□□ -0.27
SHPK-201ENST00000225519 TFPIP10646 304 aa13.37□□□□□ -0.27
SHPK-201ENST00000225519 GNSP15586 552 aa13.37□□□□□ -0.27
SHPK-201ENST00000225519 VIPR1P32241 457 aa13.37□□□□□ -0.27
SHPK-201ENST00000225519 SPINT3P49223 89 aa13.37□□□□□ -0.27
SHPK-201ENST00000225519 KIAA1024LP59773 190 aa13.37□□□□□ -0.27
SHPK-201ENST00000225519 CEACAM19Q7Z692 300 aa13.37□□□□□ -0.27
SHPK-201ENST00000225519 MEIOBQ8N635 442 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms