RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 FOLH1BQ9HBA9 442 aa16.88■□□□□ 0.29
VIM-201ENST00000224237 ACER3Q9NUN7 267 aa16.88■□□□□ 0.29
VIM-201ENST00000224237 SIDT1Q9NXL6 827 aaKnown RBP16.88■□□□□ 0.29
VIM-201ENST00000224237 MKLN1Q9UL63 735 aa16.88■□□□□ 0.29
VIM-201ENST00000224237 ERVK-19Q9WJR5 959 aa16.88■□□□□ 0.29
VIM-201ENST00000224237 ASCC3Q8N3C0 2202 aaKnown RBP16.88■□□□□ 0.29
VIM-201ENST00000224237 IGKV3D-11A0A0A0MRZ8 115 aa16.88■□□□□ 0.29
VIM-201ENST00000224237 EPPINO95925 133 aa16.88■□□□□ 0.29
VIM-201ENST00000224237 GABRA3P34903 492 aa16.88■□□□□ 0.29
VIM-201ENST00000224237 LIMS1P48059 325 aa16.88■□□□□ 0.29
VIM-201ENST00000224237 PGDP52209 483 aa16.88■□□□□ 0.29
VIM-201ENST00000224237 POU6F2P78424 691 aaPredicted RBP16.88■□□□□ 0.29
VIM-201ENST00000224237 PSG6Q00889 435 aa16.88■□□□□ 0.29
VIM-201ENST00000224237 KCNAB2Q13303 367 aa16.88■□□□□ 0.29
VIM-201ENST00000224237 TRA2AQ13595 282 aaKnown RBP eCLIP16.88■□□□□ 0.29
VIM-201ENST00000224237 MICAQ29983 383 aa16.88■□□□□ 0.29
VIM-201ENST00000224237 EXOC3L2Q2M3D2 409 aa16.88■□□□□ 0.29
VIM-201ENST00000224237 COLEC12Q5KU26 742 aa16.88■□□□□ 0.29
VIM-201ENST00000224237 PHF19Q5T6S3 580 aa16.88■□□□□ 0.29
VIM-201ENST00000224237 RALGAPA1Q6GYQ0 2036 aa16.88■□□□□ 0.29
VIM-201ENST00000224237 DHRS4L2Q6PKH6 230 aa16.88■□□□□ 0.29
VIM-201ENST00000224237 HMGN2P46Q86SG4 172 aa16.88■□□□□ 0.29
VIM-201ENST00000224237 COMTD1Q86VU5 262 aa16.88■□□□□ 0.29
VIM-201ENST00000224237 VRK2Q86Y07 508 aa16.88■□□□□ 0.29
VIM-201ENST00000224237 LACC1Q8IV20 430 aa16.88■□□□□ 0.29
VIM-201ENST00000224237 ZNF619Q8N2I2 560 aa16.88■□□□□ 0.29
VIM-201ENST00000224237 FKBP10Q96AY3 582 aa16.88■□□□□ 0.29
VIM-201ENST00000224237 ZG16BQ96DA0 208 aa16.88■□□□□ 0.29
VIM-201ENST00000224237 MBOAT4Q96T53 435 aa16.88■□□□□ 0.29
VIM-201ENST00000224237 FAM192AQ9GZU8 254 aa16.88■□□□□ 0.29
VIM-201ENST00000224237 SAP130Q9H0E3 1048 aa16.88■□□□□ 0.29
VIM-201ENST00000224237 FAM118AQ9NWS6 357 aa16.88■□□□□ 0.29
VIM-201ENST00000224237 ACAD8Q9UKU7 415 aa16.88■□□□□ 0.29
VIM-201ENST00000224237 SEC16AO15027 2179 aa16.87■□□□□ 0.29
VIM-201ENST00000224237 M0R3H8 397 aa16.87■□□□□ 0.29
VIM-201ENST00000224237 HRKO00198 91 aa16.87■□□□□ 0.29
VIM-201ENST00000224237 FFAR1O14842 300 aa16.87■□□□□ 0.29
VIM-201ENST00000224237 FLRT2O43155 660 aa16.87■□□□□ 0.29
VIM-201ENST00000224237 LDOC1O95751 146 aaPredicted RBP16.87■□□□□ 0.29
VIM-201ENST00000224237 CLIC3O95833 236 aa16.87■□□□□ 0.29
VIM-201ENST00000224237 GP1BAP07359 652 aa16.87■□□□□ 0.29
VIM-201ENST00000224237 TNNI3P19429 210 aa16.87■□□□□ 0.29
VIM-201ENST00000224237 SF3A2Q15428 464 aaKnown RBP16.87■□□□□ 0.29
VIM-201ENST00000224237 CCNJQ5T5M9 372 aa16.87■□□□□ 0.29
VIM-201ENST00000224237 RBM45Q8IUH3 476 aaKnown RBP16.87■□□□□ 0.29
VIM-201ENST00000224237 TAGAPQ8N103 731 aa16.87■□□□□ 0.29
VIM-201ENST00000224237 PIK3C3Q8NEB9 887 aa16.87■□□□□ 0.29
VIM-201ENST00000224237 OR10G2Q8NGC3 310 aa16.87■□□□□ 0.29
VIM-201ENST00000224237 PMM1Q92871 262 aa16.87■□□□□ 0.29
VIM-201ENST00000224237 VSTM2LQ96N03 204 aa16.87■□□□□ 0.29
VIM-201ENST00000224237 OR10A5Q9H207 317 aa16.87■□□□□ 0.29
VIM-201ENST00000224237 ZNF696Q9H7X3 374 aa16.87■□□□□ 0.29
VIM-201ENST00000224237 POLE3Q9NRF9 147 aa16.87■□□□□ 0.29
VIM-201ENST00000224237 KRT84Q9NSB2 600 aa16.87■□□□□ 0.29
VIM-201ENST00000224237 KLHL28Q9NXS3 571 aa16.87■□□□□ 0.29
VIM-201ENST00000224237 NINQ8N4C6 2090 aa16.87■□□□□ 0.29
VIM-201ENST00000224237 SYNDIG1LA6NDD5 238 aa16.86■□□□□ 0.29
VIM-201ENST00000224237 C17orf105B2RV13 164 aa16.86■□□□□ 0.29
VIM-201ENST00000224237 DYRK3O43781 588 aa16.86■□□□□ 0.29
VIM-201ENST00000224237 SEMA7AO75326 666 aa16.86■□□□□ 0.29
VIM-201ENST00000224237 SCRG1O75711 98 aa16.86■□□□□ 0.29
VIM-201ENST00000224237 THBS1P07996 1170 aa16.86■□□□□ 0.29
VIM-201ENST00000224237 ITGAMP11215 1152 aa16.86■□□□□ 0.29
VIM-201ENST00000224237 ANXA8P13928 327 aa16.86■□□□□ 0.29
VIM-201ENST00000224237 ACP1P24666 158 aa16.86■□□□□ 0.29
VIM-201ENST00000224237 RHAGQ02094 409 aa16.86■□□□□ 0.29
VIM-201ENST00000224237 LARS2Q15031 903 aaKnown RBP16.86■□□□□ 0.29
VIM-201ENST00000224237 VWA2Q5GFL6 755 aa16.86■□□□□ 0.29
VIM-201ENST00000224237 BPHLQ86WA6 291 aaPredicted RBP16.86■□□□□ 0.29
VIM-201ENST00000224237 PPP1R3BQ86XI6 285 aa16.86■□□□□ 0.29
VIM-201ENST00000224237 OFCC1Q8IZS5 231 aa16.86■□□□□ 0.29
VIM-201ENST00000224237 OR7G1Q8NGA0 311 aa16.86■□□□□ 0.29
VIM-201ENST00000224237 DHRS1Q96LJ7 313 aa16.86■□□□□ 0.29
VIM-201ENST00000224237 PSD2Q9BQI7 771 aa16.86■□□□□ 0.29
VIM-201ENST00000224237 WFDC6Q9BQY6 131 aa16.86■□□□□ 0.29
VIM-201ENST00000224237 NMNAT1Q9HAN9 279 aaPredicted RBP16.86■□□□□ 0.29
VIM-201ENST00000224237 RXFP3Q9NSD7 469 aa16.86■□□□□ 0.29
VIM-201ENST00000224237 ZNF232Q9UNY5 417 aa16.86■□□□□ 0.29
VIM-201ENST00000224237 ZNF443Q9Y2A4 671 aaPredicted RBP16.86■□□□□ 0.29
VIM-201ENST00000224237 FER1L5A0AVI2 2057 aa16.86■□□□□ 0.29
VIM-201ENST00000224237 ARRDC5A6NEK1 342 aa16.86■□□□□ 0.29
VIM-201ENST00000224237 TTC36A6NLP5 189 aa16.86■□□□□ 0.29
VIM-201ENST00000224237 KIAA0513O60268 411 aa16.86■□□□□ 0.29
VIM-201ENST00000224237 BRINP1O60477 761 aa16.86■□□□□ 0.29
VIM-201ENST00000224237 HBQ1P09105 142 aa16.86■□□□□ 0.29
VIM-201ENST00000224237 IL7RP16871 459 aa16.86■□□□□ 0.29
VIM-201ENST00000224237 RPS4Y1P22090 263 aaKnown RBP16.86■□□□□ 0.29
VIM-201ENST00000224237 CSTF2P33240 577 aaKnown RBP eCLIP16.86■□□□□ 0.29
VIM-201ENST00000224237 PIGAP37287 484 aa16.86■□□□□ 0.29
VIM-201ENST00000224237 SMIM11AP58511 58 aa16.86■□□□□ 0.29
VIM-201ENST00000224237 GPR68Q15743 365 aa16.86■□□□□ 0.29
VIM-201ENST00000224237 GALNT5Q7Z7M9 940 aa16.86■□□□□ 0.29
VIM-201ENST00000224237 OR6T1Q8NGN1 323 aa16.86■□□□□ 0.29
VIM-201ENST00000224237 TSLPQ969D9 159 aa16.86■□□□□ 0.29
VIM-201ENST00000224237 ALPK1Q96QP1 1244 aa16.86■□□□□ 0.29
VIM-201ENST00000224237 ARHGDIGQ99819 225 aa16.86■□□□□ 0.29
VIM-201ENST00000224237 TGIF2Q9GZN2 237 aa16.86■□□□□ 0.29
VIM-201ENST00000224237 PNO1Q9NRX1 252 aaKnown RBP16.86■□□□□ 0.29
VIM-201ENST00000224237 RHCGQ9UBD6 479 aa16.86■□□□□ 0.29
VIM-201ENST00000224237 PRODH2Q9UF12 536 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms