RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 ATAD3BQ5T9A4 648 aa25.15■■□□□ 1.62
CHMP4B-201ENST00000217402 FIGNL1Q6PIW4 674 aa25.15■■□□□ 1.62
CHMP4B-201ENST00000217402 C16orf62Q7Z3J2 963 aa25.15■■□□□ 1.62
CHMP4B-201ENST00000217402 SLC7A6OSQ96CW6 309 aaPredicted RBP25.15■■□□□ 1.62
CHMP4B-201ENST00000217402 ZNF552Q9H707 407 aaPredicted RBP25.15■■□□□ 1.62
CHMP4B-201ENST00000217402 EXD2Q9NVH0 621 aa25.15■■□□□ 1.62
CHMP4B-201ENST00000217402 STMN3Q9NZ72 180 aa25.15■■□□□ 1.62
CHMP4B-201ENST00000217402 PCDHGB3Q9Y5G1 929 aa25.15■■□□□ 1.62
CHMP4B-201ENST00000217402 CEACAM4O75871 244 aa25.14■■□□□ 1.61
CHMP4B-201ENST00000217402 AGR2O95994 175 aa25.14■■□□□ 1.61
CHMP4B-201ENST00000217402 ALPPP05187 535 aa25.14■■□□□ 1.61
CHMP4B-201ENST00000217402 PIGAP37287 484 aa25.14■■□□□ 1.61
CHMP4B-201ENST00000217402 SOX3P41225 446 aa25.14■■□□□ 1.61
CHMP4B-201ENST00000217402 MAGEA8P43361 318 aa25.14■■□□□ 1.61
CHMP4B-201ENST00000217402 FUT5Q11128 374 aa25.14■■□□□ 1.61
CHMP4B-201ENST00000217402 CYP27C1Q4G0S4 372 aa25.14■■□□□ 1.61
CHMP4B-201ENST00000217402 DCST2Q5T1A1 773 aa25.14■■□□□ 1.61
CHMP4B-201ENST00000217402 SLC34A3Q8N130 599 aa25.14■■□□□ 1.61
CHMP4B-201ENST00000217402 BCORP1Q8N888 145 aa25.14■■□□□ 1.61
CHMP4B-201ENST00000217402 EFHD2Q96C19 240 aaPredicted RBP25.14■■□□□ 1.61
CHMP4B-201ENST00000217402 OMA1Q96E52 524 aa25.14■■□□□ 1.61
CHMP4B-201ENST00000217402 ANKRD10Q9NXR5 420 aa25.14■■□□□ 1.61
CHMP4B-201ENST00000217402 PACSIN3Q9UKS6 424 aa25.14■■□□□ 1.61
CHMP4B-201ENST00000217402 NPFFR2Q9Y5X5 522 aa25.14■■□□□ 1.61
CHMP4B-201ENST00000217402 KCNK2O95069 426 aa25.13■■□□□ 1.61
CHMP4B-201ENST00000217402 F10P00742 488 aa25.13■■□□□ 1.61
CHMP4B-201ENST00000217402 DECR1Q16698 335 aa25.13■■□□□ 1.61
CHMP4B-201ENST00000217402 ISLR2Q6UXK2 745 aa25.13■■□□□ 1.61
CHMP4B-201ENST00000217402 OLIG3Q7RTU3 272 aa25.13■■□□□ 1.61
CHMP4B-201ENST00000217402 TMEM156Q8N614 296 aa25.13■■□□□ 1.61
CHMP4B-201ENST00000217402 ASB15Q8WXK1 588 aa25.13■■□□□ 1.61
CHMP4B-201ENST00000217402 GMPR2Q9P2T1 348 aaKnown RBP25.13■■□□□ 1.61
CHMP4B-201ENST00000217402 ABCD2Q9UBJ2 740 aa25.13■■□□□ 1.61
CHMP4B-201ENST00000217402 P2RX2Q9UBL9 471 aa25.13■■□□□ 1.61
CHMP4B-201ENST00000217402 ZZEF1O43149 2961 aa25.13■■□□□ 1.61
CHMP4B-201ENST00000217402 MGAQ8IWI9 3026 aa25.12■■□□□ 1.61
CHMP4B-201ENST00000217402 PRAMEF27A3QJZ7 478 aa25.12■■□□□ 1.61
CHMP4B-201ENST00000217402 REM1O75628 298 aa25.12■■□□□ 1.61
CHMP4B-201ENST00000217402 ATP5HO75947 161 aa25.12■■□□□ 1.61
CHMP4B-201ENST00000217402 OR6B1O95007 311 aa25.12■■□□□ 1.61
CHMP4B-201ENST00000217402 IGKV1D-16P01601 117 aa25.12■■□□□ 1.61
CHMP4B-201ENST00000217402 BCHEP06276 602 aa25.12■■□□□ 1.61
CHMP4B-201ENST00000217402 BMP2P12643 396 aa25.12■■□□□ 1.61
CHMP4B-201ENST00000217402 KRT20P35900 424 aa25.12■■□□□ 1.61
CHMP4B-201ENST00000217402 SYPL1Q16563 259 aa25.12■■□□□ 1.61
CHMP4B-201ENST00000217402 C19orf48Q6RUI8 117 aa25.12■■□□□ 1.61
CHMP4B-201ENST00000217402 IFNEQ86WN2 208 aa25.12■■□□□ 1.61
CHMP4B-201ENST00000217402 RNF148Q8N7C7 305 aa25.12■■□□□ 1.61
CHMP4B-201ENST00000217402 ANKFN1Q8N957 763 aa25.12■■□□□ 1.61
CHMP4B-201ENST00000217402 CDRT15Q96T59 188 aa25.12■■□□□ 1.61
CHMP4B-201ENST00000217402 C1orf21Q9H246 121 aa25.12■■□□□ 1.61
CHMP4B-201ENST00000217402 FBXO34Q9NWN3 711 aa25.12■■□□□ 1.61
CHMP4B-201ENST00000217402 THUMPD1Q9NXG2 353 aaKnown RBP25.12■■□□□ 1.61
CHMP4B-201ENST00000217402 ABI3Q9P2A4 366 aa25.12■■□□□ 1.61
CHMP4B-201ENST00000217402 TMEM181Q9P2C4 612 aa25.12■■□□□ 1.61
CHMP4B-201ENST00000217402 USP22Q9UPT9 525 aa25.12■■□□□ 1.61
CHMP4B-201ENST00000217402 GYG2O15488 501 aa25.12■■□□□ 1.61
CHMP4B-201ENST00000217402 HNRNPCL1O60812 293 aaKnown RBP25.12■■□□□ 1.61
CHMP4B-201ENST00000217402 SOX30O94993 753 aa25.12■■□□□ 1.61
CHMP4B-201ENST00000217402 NR2F1P10589 423 aa25.12■■□□□ 1.61
CHMP4B-201ENST00000217402 IL12BP29460 328 aa25.12■■□□□ 1.61
CHMP4B-201ENST00000217402 LIPEQ05469 1076 aa25.12■■□□□ 1.61
CHMP4B-201ENST00000217402 GPAT3Q53EU6 434 aa25.12■■□□□ 1.61
CHMP4B-201ENST00000217402 ZNF468Q5VIY5 522 aaPredicted RBP25.12■■□□□ 1.61
CHMP4B-201ENST00000217402 HEPHL1Q6MZM0 1159 aa25.12■■□□□ 1.61
CHMP4B-201ENST00000217402 LYPD8Q6UX82 237 aa25.12■■□□□ 1.61
CHMP4B-201ENST00000217402 BNC2Q6ZN30 1099 aaPredicted RBP25.12■■□□□ 1.61
CHMP4B-201ENST00000217402 SERPINA11Q86U17 422 aa25.12■■□□□ 1.61
CHMP4B-201ENST00000217402 SLC15A4Q8N697 577 aa25.12■■□□□ 1.61
CHMP4B-201ENST00000217402 OR5M3Q8NGP4 307 aa25.12■■□□□ 1.61
CHMP4B-201ENST00000217402 ZBTB20Q9HC78 741 aaPredicted RBP25.12■■□□□ 1.61
CHMP4B-201ENST00000217402 SLC28A2O43868 658 aa25.11■■□□□ 1.61
CHMP4B-201ENST00000217402 GZMMP51124 257 aa25.11■■□□□ 1.61
CHMP4B-201ENST00000217402 POLE2P56282 527 aa25.11■■□□□ 1.61
CHMP4B-201ENST00000217402 PSPHP78330 225 aa25.11■■□□□ 1.61
CHMP4B-201ENST00000217402 ADRM1Q16186 407 aa25.11■■□□□ 1.61
CHMP4B-201ENST00000217402 IL20RBQ6UXL0 311 aa25.11■■□□□ 1.61
CHMP4B-201ENST00000217402 PTOV1Q86YD1 416 aa25.11■■□□□ 1.61
CHMP4B-201ENST00000217402 SLC38A5Q8WUX1 472 aa25.11■■□□□ 1.61
CHMP4B-201ENST00000217402 ZNF583Q96ND8 569 aa25.11■■□□□ 1.61
CHMP4B-201ENST00000217402 ADOQ96SZ5 270 aa25.11■■□□□ 1.61
CHMP4B-201ENST00000217402 A4GALTQ9NPC4 353 aa25.11■■□□□ 1.61
CHMP4B-201ENST00000217402 PLA2G3Q9NZ20 509 aa25.11■■□□□ 1.61
CHMP4B-201ENST00000217402 SEC23IPQ9Y6Y8 1000 aaKnown RBP25.11■■□□□ 1.61
CHMP4B-201ENST00000217402 MAP1BP46821 2468 aaKnown RBP25.1■■□□□ 1.61
CHMP4B-201ENST00000217402 TMEM247A6NEH6 219 aa25.1■■□□□ 1.61
CHMP4B-201ENST00000217402 PPM1BO75688 479 aa25.1■■□□□ 1.61
CHMP4B-201ENST00000217402 AK1P00568 194 aa25.1■■□□□ 1.61
CHMP4B-201ENST00000217402 ITGB2P05107 769 aa25.1■■□□□ 1.61
CHMP4B-201ENST00000217402 TFPTP0C1Z6 253 aa25.1■■□□□ 1.61
CHMP4B-201ENST00000217402 FBXW4P57775 412 aa25.1■■□□□ 1.61
CHMP4B-201ENST00000217402 HPCAP84074 193 aa25.1■■□□□ 1.61
CHMP4B-201ENST00000217402 MFAP5Q13361 173 aa25.1■■□□□ 1.61
CHMP4B-201ENST00000217402 ARHGAP11BQ3KRB8 267 aa25.1■■□□□ 1.61
CHMP4B-201ENST00000217402 DESI1Q6ICB0 168 aa25.1■■□□□ 1.61
CHMP4B-201ENST00000217402 OPN5Q6U736 354 aa25.1■■□□□ 1.61
CHMP4B-201ENST00000217402 ZAR1Q86SH2 424 aa25.1■■□□□ 1.61
CHMP4B-201ENST00000217402 CALHM3Q86XJ0 350 aa25.1■■□□□ 1.61
CHMP4B-201ENST00000217402 ZZZ3Q8IYH5 903 aa25.1■■□□□ 1.61
CHMP4B-201ENST00000217402 CHDHQ8NE62 594 aaPredicted RBP25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms