RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 MYF6P23409 242 aa12.9□□□□□ -0.34
TGFBR3-201ENST00000212355 EIF2B1Q14232 305 aaKnown RBP12.9□□□□□ -0.34
TGFBR3-201ENST00000212355 SLC16A9Q7RTY1 509 aa12.9□□□□□ -0.34
TGFBR3-201ENST00000212355 TRIM46Q7Z4K8 759 aa12.9□□□□□ -0.34
TGFBR3-201ENST00000212355 FTMTQ8N4E7 242 aa12.9□□□□□ -0.34
TGFBR3-201ENST00000212355 C3orf58Q8NDZ4 430 aa12.9□□□□□ -0.34
TGFBR3-201ENST00000212355 OR13J1Q8NGT2 312 aa12.9□□□□□ -0.34
TGFBR3-201ENST00000212355 FAM83CQ9BQN1 747 aa12.9□□□□□ -0.34
TGFBR3-201ENST00000212355 DEFB126Q9BYW3 111 aa12.9□□□□□ -0.34
TGFBR3-201ENST00000212355 KCNK13Q9HB14 408 aa12.9□□□□□ -0.34
TGFBR3-201ENST00000212355 WDR6Q9NNW5 1121 aaKnown RBP12.9□□□□□ -0.34
TGFBR3-201ENST00000212355 H0YJX3 145 aa12.9□□□□□ -0.35
TGFBR3-201ENST00000212355 ZNF35P13682 527 aa12.9□□□□□ -0.35
TGFBR3-201ENST00000212355 CDK5R2Q13319 367 aa12.9□□□□□ -0.35
TGFBR3-201ENST00000212355 ELOCQ15369 112 aa12.9□□□□□ -0.35
TGFBR3-201ENST00000212355 PLEKHG7Q6ZR37 379 aa12.9□□□□□ -0.35
TGFBR3-201ENST00000212355 TRAPPC6BQ86SZ2 158 aa12.9□□□□□ -0.35
TGFBR3-201ENST00000212355 B3GNT7Q8NFL0 401 aa12.9□□□□□ -0.35
TGFBR3-201ENST00000212355 SDSLQ96GA7 329 aa12.9□□□□□ -0.35
TGFBR3-201ENST00000212355 NEDD4LQ96PU5 975 aa12.9□□□□□ -0.35
TGFBR3-201ENST00000212355 SSX3Q99909 188 aa12.9□□□□□ -0.35
TGFBR3-201ENST00000212355 VAPAQ9P0L0 249 aa12.9□□□□□ -0.35
TGFBR3-201ENST00000212355 AKAP12Q02952 1782 aa12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 C1orf226A1L170 272 aa12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 ALDOBP05062 364 aa12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 CD34P28906 385 aa12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 SOX9P48436 509 aa12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 GRM7Q14831 915 aa12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 BATFQ16520 125 aa12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 LEXMQ3ZCV2 418 aa12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 MEDAGQ5VYS4 303 aa12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 FIGLAQ6QHK4 219 aa12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 VRK2Q86Y07 508 aa12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 UMODL1-AS1Q8N2C9 162 aa12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 OR4K5Q8NGD3 323 aa12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 OR5AK2Q8NH90 309 aa12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 CRTAPO75718 401 aaPredicted RBP12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 MPC1LP0DKB6 136 aa12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 CLDN8P56748 225 aa12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 RAB4BP61018 213 aa12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 SNTA1Q13424 505 aa12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 FGFBP1Q14512 234 aa12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 UGT3A2Q3SY77 523 aa12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 CNIH2Q6PI25 160 aa12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 RELL1Q8IUW5 271 aa12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 SLC35F2Q8IXU6 374 aa12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 GPR26Q8NDV2 337 aa12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 OR51T1Q8NGJ9 327 aa12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 ZNF420Q8TAQ5 688 aaPredicted RBP12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 ARHGAP9Q9BRR9 750 aa12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 PRKRAO75569 313 aaKnown RBP12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 NXPH3O95157 252 aa12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 GABRR1P24046 479 aa12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 RPL26P61254 145 aaKnown RBP12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 EIF5AP63241 154 aaKnown RBP12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 RAB11BQ15907 218 aa12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 STEAP4Q687X5 459 aa12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 FIP1L1Q6UN15 594 aaKnown RBP12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 ZNF100Q8IYN0 542 aa12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 TEX26Q8N6G2 289 aa12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 IL22RA1Q8N6P7 574 aa12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 ZDHHC12Q96GR4 267 aa12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 RBM24Q9BX46 236 aaKnown RBP12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 RNF186Q9NXI6 227 aa12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 OR6C2Q9NZP2 312 aa12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 H7C2Y5 167 aa12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 HSPB6O14558 160 aa12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 ACPPP15309 386 aa12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 ELOAQ14241 798 aaKnown RBP12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 RSU1Q15404 277 aa12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 MICAQ29983 383 aa12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 OLIG3Q7RTU3 272 aa12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 OR5W2Q8NH69 310 aa12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 EGLN2Q96KS0 407 aa12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 TEPSINQ96N21 525 aa12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 ZNF225Q9UK10 706 aa12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 RHBDD3Q9Y3P4 386 aa12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 PHRF1Q9P1Y6 1649 aaKnown RBP12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 TEX13CA0A0J9YWL9 993 aa12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 HOXD8P13378 290 aaPredicted RBP12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 ANKK1Q8NFD2 765 aa12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 GLYATL2Q8WU03 294 aa12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 ALG8Q9BVK2 526 aa12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 IL26Q9NPH9 171 aa12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 RNF215Q9Y6U7 377 aa12.89□□□□□ -0.35
TGFBR3-201ENST00000212355 KIAA0355O15063 1070 aa12.88□□□□□ -0.35
TGFBR3-201ENST00000212355 NUDT21O43809 227 aaKnown RBP12.88□□□□□ -0.35
TGFBR3-201ENST00000212355 RDH16O75452 317 aa12.88□□□□□ -0.35
TGFBR3-201ENST00000212355 F10P00742 488 aa12.88□□□□□ -0.35
TGFBR3-201ENST00000212355 GJA5P36382 358 aa12.88□□□□□ -0.35
TGFBR3-201ENST00000212355 NATD1Q8N6N6 113 aa12.88□□□□□ -0.35
TGFBR3-201ENST00000212355 PDE7BQ9NP56 450 aa12.88□□□□□ -0.35
TGFBR3-201ENST00000212355 PCDHGB2Q9Y5G2 931 aa12.88□□□□□ -0.35
TGFBR3-201ENST00000212355 SMLR1H3BR10 107 aa12.88□□□□□ -0.35
TGFBR3-201ENST00000212355 TMEM225BP0DP42 221 aa12.88□□□□□ -0.35
TGFBR3-201ENST00000212355 CA5AP35218 305 aa12.88□□□□□ -0.35
TGFBR3-201ENST00000212355 PRKXP51817 358 aa12.88□□□□□ -0.35
TGFBR3-201ENST00000212355 ERVK-25P63136 954 aa12.88□□□□□ -0.35
TGFBR3-201ENST00000212355 GNMTQ14749 295 aa12.88□□□□□ -0.35
TGFBR3-201ENST00000212355 MEX3BQ6ZN04 569 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms