RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 SLC25A19Q9HC21 320 aa7.73□□□□□ -1.17
VAMP3-201ENST00000054666 AKIP1Q9NQ31 210 aa7.73□□□□□ -1.17
VAMP3-201ENST00000054666 GALNT8Q9NY28 637 aa7.73□□□□□ -1.17
VAMP3-201ENST00000054666 TAS2R16Q9NYV7 291 aa7.73□□□□□ -1.17
VAMP3-201ENST00000054666 MKLN1Q9UL63 735 aa7.73□□□□□ -1.17
VAMP3-201ENST00000054666 UNC80Q8N2C7 3258 aa7.73□□□□□ -1.17
VAMP3-201ENST00000054666 A0A087WUU8 490 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 A0A087WV62 115 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 IRGMA1A4Y4 181 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 CCRL2O00421 344 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 TLX2O43763 284 aaPredicted RBP7.72□□□□□ -1.17
VAMP3-201ENST00000054666 OR5F1O95221 314 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 AK1P00568 194 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 ATP1B1P05026 303 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 CELA2BP08218 269 aaPredicted RBP7.72□□□□□ -1.17
VAMP3-201ENST00000054666 DBTP11182 482 aaKnown RBP7.72□□□□□ -1.17
VAMP3-201ENST00000054666 CDH3P22223 829 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 CSTF2P33240 577 aaKnown RBP eCLIP7.72□□□□□ -1.17
VAMP3-201ENST00000054666 IDUAP35475 653 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 RHAGQ02094 409 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 TSPAN31Q12999 210 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 FZD2Q14332 565 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 GINS1Q14691 196 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 COL19A1Q14993 1142 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 SNAPC1Q16533 368 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 OCLNQ16625 522 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 DUSP5Q16690 384 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 TSTQ16762 297 aaKnown RBP7.72□□□□□ -1.17
VAMP3-201ENST00000054666 SLC27A4Q6P1M0 643 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 IGFN1Q86VF2 1251 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 ZNF761Q86XN6 746 aaPredicted RBP7.72□□□□□ -1.17
VAMP3-201ENST00000054666 SLC34A3Q8N130 599 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 ZNF619Q8N2I2 560 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 CDRT4Q8N9R6 151 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 TOR1AIP2Q8NFQ8 470 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 OR9Q1Q8NGQ5 310 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 ACOT11Q8WXI4 607 aaPredicted RBP7.72□□□□□ -1.17
VAMP3-201ENST00000054666 MGLLQ99685 303 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 MCHR1Q99705 422 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 PIGUQ9H490 435 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 FBXO8Q9NRD0 319 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 TBCCD1Q9NVR7 557 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 OSGIN1Q9UJX0 560 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 C19orf53Q9UNZ5 99 aaPredicted RBP7.72□□□□□ -1.17
VAMP3-201ENST00000054666 SATB2Q9UPW6 733 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 CORINQ9Y5Q5 1042 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 A0A1W2PPC4 97 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 FGF17O60258 216 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 FCMRO60667 390 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 GALR3O60755 368 aaPredicted RBP7.72□□□□□ -1.17
VAMP3-201ENST00000054666 CBFA2T3O75081 653 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 LDB3O75112 727 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 COQ9O75208 318 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 ZNF217O75362 1048 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 STX11O75558 287 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 UBXN7O94888 489 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 GPR75O95800 540 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 TP53P04637 393 aaPredicted RBP7.72□□□□□ -1.17
VAMP3-201ENST00000054666 THBS1P07996 1170 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 ACP2P11117 423 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 TYRP1P17643 537 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 LSSP48449 732 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 PPM1FP49593 454 aaPredicted RBP7.72□□□□□ -1.17
VAMP3-201ENST00000054666 RAB38P57729 211 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 ZNF155Q12901 538 aaPredicted RBP7.72□□□□□ -1.17
VAMP3-201ENST00000054666 C1orf61Q13536 156 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 ATP1A4Q13733 1029 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 NCF4Q15080 339 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 GPR68Q15743 365 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 ZNF404Q494X3 552 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 DCST2Q5T1A1 773 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 TYW3Q6IPR3 259 aaKnown RBP7.72□□□□□ -1.17
VAMP3-201ENST00000054666 ZCCHC12Q6PEW1 402 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 SLC36A4Q6YBV0 504 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 SYT13Q7L8C5 426 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 CA13Q8N1Q1 262 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 FAM26EQ8N5C1 309 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 C19orf47Q8N9M1 422 aaKnown RBP7.72□□□□□ -1.17
VAMP3-201ENST00000054666 OR6Q1Q8NGQ2 317 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 SLC41A3Q96GZ6 507 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 FAM46AQ96IP4 442 aaKnown RBP7.72□□□□□ -1.17
VAMP3-201ENST00000054666 LRR1Q96L50 414 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 DACH2Q96NX9 599 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 STACQ99469 402 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 CHCHD6Q9BRQ6 235 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 SLIRPQ9GZT3 109 aaKnown RBP7.72□□□□□ -1.17
VAMP3-201ENST00000054666 ZNF350Q9GZX5 532 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 SEMA6CQ9H3T2 930 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 ARMC7Q9H6L4 198 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 DUSP22Q9NRW4 184 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 GPR27Q9NS67 375 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 SEMA4GQ9NTN9 838 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 CHCHD3Q9NX63 227 aaKnown RBP7.72□□□□□ -1.17
VAMP3-201ENST00000054666 WSB2Q9NYS7 404 aaPredicted RBP7.72□□□□□ -1.17
VAMP3-201ENST00000054666 CCDC59Q9P031 241 aaKnown RBP7.72□□□□□ -1.17
VAMP3-201ENST00000054666 POMT2Q9UKY4 750 aa7.72□□□□□ -1.17
VAMP3-201ENST00000054666 GPR55Q9Y2T6 319 aaPredicted RBP7.72□□□□□ -1.17
VAMP3-201ENST00000054666 MRPS2Q9Y399 296 aaKnown RBP7.72□□□□□ -1.17
VAMP3-201ENST00000054666 C10orf142B7Z368 130 aa7.71□□□□□ -1.17
VAMP3-201ENST00000054666 KPNA4O00629 521 aaPredicted RBP7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms