RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Myo16Q5DU14 1919 aa8.02□□□□□ -1.12
Sf3b1-201ENSMUST00000027127 Plxna3P70208 1872 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Zfp949E9Q732 603 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Vmn2r92L7N2A4 860 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Psmb5O55234 264 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Acp2P24638 423 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Slc6a12P31651 614 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Pold1P52431 1105 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Polr2iP60898 125 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 SctQ08535 133 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Qsox2Q3TMX7 692 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Ldoc1Q7TPY9 151 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 TufmQ8BFR5 452 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 TapbplQ8VD31 451 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Olfr643Q8VGY1 314 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Rnf128Q9D304 428 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 NaaaQ9D7V9 362 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Wdr53Q9DB94 358 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 PolmQ9JIW4 496 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 CtszQ9WUU7 306 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Cfap77A0A087WRI3 283 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Olfr1303A2AVW1 312 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Cyp2d37-psF6YKB5 150 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Zfp809G3X9G7 402 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Bbip1J3QMK2 67 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Mllt10O54826 1068 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Nme6O88425 189 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Mtx2O88441 263 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Adamts15P59384 950 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Stx4P70452 298 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 UradQ283N4 178 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Arntl2Q2VPD4 579 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Cd53Q61451 219 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Cd34Q64314 382 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Rsbn1Q80T69 795 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Il17rdQ8JZL1 738 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Nfatc4Q8K120 901 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Plekho2Q8K124 495 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Rad9aQ9Z0F6 389 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Ttc39aA2ACP1 578 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Vmn1r25H3BLP0 302 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 JtbO88824 146 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Klk1b16P04071 261 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Tnfsf9P41274 309 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Gm10696Q3UTC4 357 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Hsf5Q5ND04 624 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Ugt2a2Q6PDD0 528 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Vmn2r81Q80Z09 865 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Q810M1 233 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Prox2Q8BII1 593 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Gm4922Q8C0N0 497 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Faim2Q8K097 317 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 PpcsQ8VDG5 311 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Olfr53Q8VGL8 312 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Gid4Q9CPY6 217 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Sema4gQ9WUH7 837 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Numa1E9Q7G0 2094 aaKnown RBP8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Gm3952A0A0A6YXJ1 191 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Gm4141K9J7H2 306 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Gpr50O88495 591 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 LckP06240 509 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 GlaP51569 419 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Polr2cP97760 275 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 March9Q3TZ87 348 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Laptm5Q61168 261 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Pon2Q62086 354 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Olfr1275Q7TQY8 312 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Slc36a2Q8BHK3 478 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Leng9Q8BTN6 485 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Ppwd1Q8CEC6 646 aaKnown RBP8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Pcolce2Q8R4W6 414 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Fitm1Q91V79 292 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Spcs2Q9CYN2 226 aaKnown RBP8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Emc7Q9EP72 241 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Fgf21Q9JJN1 210 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Spry1Q9QXV9 313 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Tmeff2Q9QYM9 374 aa8.02□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Vmn2r56E9Q4U5 779 aa8.01□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Xkr6E9Q6C8 638 aa8.01□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 IlkO55222 452 aa8.01□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Ceacam1P31809 521 aa8.01□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Slc19a1P41438 512 aa8.01□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Polr1cP52432 346 aaKnown RBP8.01□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Adra1aP97718 466 aa8.01□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Atp5a1Q03265 553 aaKnown RBP8.01□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 B4galnt2Q09199 510 aa8.01□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Pde12Q3TIU4 608 aa8.01□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Gpr39Q5U431 456 aa8.01□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Nup62Q63850 526 aa8.01□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Pqlc3Q8C6U2 202 aa8.01□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 EloaQ8CB77 773 aaKnown RBP8.01□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 EfhbQ8CDU5 853 aa8.01□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Lyrm4Q8K215 91 aa8.01□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Ebf4Q8K4J2 599 aa8.01□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Slc35c2Q8VCX2 364 aa8.01□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Olfr692Q8VF03 329 aa8.01□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Ceacam2Q925P2 520 aa8.01□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 MtpapQ9D0D3 585 aaKnown RBP8.01□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Tmprss6Q9DBI0 811 aa8.01□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 RhouQ9EQT3 261 aa8.01□□□□□ -1.13
Retrieved 100 of 22,080 RNA–protein pairs in 28.6 ms