RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 GYG2O15488 501 aa11.39□□□□□ -0.59
LINC00339-213ENST00000642137 TNFRSF21O75509 655 aa11.39□□□□□ -0.59
LINC00339-213ENST00000642137 AK1P00568 194 aa11.39□□□□□ -0.59
LINC00339-213ENST00000642137 ETFAP13804 333 aa11.39□□□□□ -0.59
LINC00339-213ENST00000642137 NAGAP17050 411 aa11.39□□□□□ -0.59
LINC00339-213ENST00000642137 TRHRP34981 398 aaPredicted RBP11.39□□□□□ -0.59
LINC00339-213ENST00000642137 CCL11P51671 97 aa11.39□□□□□ -0.59
LINC00339-213ENST00000642137 CASP9P55211 416 aa11.39□□□□□ -0.59
LINC00339-213ENST00000642137 EEFSECP57772 596 aaKnown RBP11.39□□□□□ -0.59
LINC00339-213ENST00000642137 MLF1P58340 268 aa11.39□□□□□ -0.59
LINC00339-213ENST00000642137 MTPNP58546 118 aa11.39□□□□□ -0.59
LINC00339-213ENST00000642137 DSTNP60981 165 aa11.39□□□□□ -0.59
LINC00339-213ENST00000642137 RPS26P62854 115 aaKnown RBP11.39□□□□□ -0.59
LINC00339-213ENST00000642137 DUSP5Q16690 384 aa11.39□□□□□ -0.59
LINC00339-213ENST00000642137 MEP1AQ16819 746 aa11.39□□□□□ -0.59
LINC00339-213ENST00000642137 ARHGAP11BQ3KRB8 267 aa11.39□□□□□ -0.59
LINC00339-213ENST00000642137 SPATS1Q496A3 300 aa11.39□□□□□ -0.59
LINC00339-213ENST00000642137 RABL3Q5HYI8 236 aa11.39□□□□□ -0.59
LINC00339-213ENST00000642137 IRAK1BP1Q5VVH5 260 aa11.39□□□□□ -0.59
LINC00339-213ENST00000642137 AP1ARQ63HQ0 302 aa11.39□□□□□ -0.59
LINC00339-213ENST00000642137 TNFAIP8L2Q6P589 184 aaPredicted RBP11.39□□□□□ -0.59
LINC00339-213ENST00000642137 NPSR1Q6W5P4 371 aa11.39□□□□□ -0.59
LINC00339-213ENST00000642137 WDR53Q7Z5U6 358 aaPredicted RBP11.39□□□□□ -0.59
LINC00339-213ENST00000642137 YTHDF3Q7Z739 585 aaKnown RBP11.39□□□□□ -0.59
LINC00339-213ENST00000642137 SERPINA11Q86U17 422 aa11.39□□□□□ -0.59
LINC00339-213ENST00000642137 CALHM3Q86XJ0 350 aa11.39□□□□□ -0.59
LINC00339-213ENST00000642137 DEFB107AQ8IZN7 70 aa11.39□□□□□ -0.59
LINC00339-213ENST00000642137 TAGAPQ8N103 731 aa11.39□□□□□ -0.59
LINC00339-213ENST00000642137 ARHGAP24Q8N264 748 aa11.39□□□□□ -0.59
LINC00339-213ENST00000642137 METTL25Q8N6Q8 603 aa11.39□□□□□ -0.59
LINC00339-213ENST00000642137 CHDHQ8NE62 594 aaPredicted RBP11.39□□□□□ -0.59
LINC00339-213ENST00000642137 OR5D16Q8NGK9 328 aa11.39□□□□□ -0.59
LINC00339-213ENST00000642137 OR10A6Q8NH74 314 aa11.39□□□□□ -0.59
LINC00339-213ENST00000642137 FAM110BQ8TC76 370 aa11.39□□□□□ -0.59
LINC00339-213ENST00000642137 BRIX1Q8TDN6 353 aaKnown RBP11.39□□□□□ -0.59
LINC00339-213ENST00000642137 GPR151Q8TDV0 419 aa11.39□□□□□ -0.59
LINC00339-213ENST00000642137 APOBEC4Q8WW27 367 aaKnown RBP11.39□□□□□ -0.59
LINC00339-213ENST00000642137 JADE3Q92613 823 aa11.39□□□□□ -0.59
LINC00339-213ENST00000642137 ZNF583Q96ND8 569 aa11.39□□□□□ -0.59
LINC00339-213ENST00000642137 GAL3ST4Q96RP7 486 aa11.39□□□□□ -0.59
LINC00339-213ENST00000642137 LMF1Q96S06 567 aa11.39□□□□□ -0.59
LINC00339-213ENST00000642137 CDRT15Q96T59 188 aa11.39□□□□□ -0.59
LINC00339-213ENST00000642137 SPATA9Q9BWV2 254 aa11.39□□□□□ -0.59
LINC00339-213ENST00000642137 BTBD2Q9BX70 525 aa11.39□□□□□ -0.59
LINC00339-213ENST00000642137 NXF5Q9H1B4 397 aaKnown RBP11.39□□□□□ -0.59
LINC00339-213ENST00000642137 TMEM38AQ9H6F2 299 aa11.39□□□□□ -0.59
LINC00339-213ENST00000642137 LIN28AQ9H9Z2 209 aaKnown RBP11.39□□□□□ -0.59
LINC00339-213ENST00000642137 CPNE5Q9HCH3 593 aa11.39□□□□□ -0.59
LINC00339-213ENST00000642137 SPAG4Q9NPE6 437 aa11.39□□□□□ -0.59
LINC00339-213ENST00000642137 TEKT2Q9UIF3 430 aa11.39□□□□□ -0.59
LINC00339-213ENST00000642137 MRTO4Q9UKD2 239 aaKnown RBP11.39□□□□□ -0.59
LINC00339-213ENST00000642137 CBLCQ9ULV8 474 aa11.39□□□□□ -0.59
LINC00339-213ENST00000642137 LIPT1Q9Y234 373 aa11.39□□□□□ -0.59
LINC00339-213ENST00000642137 KCNE3Q9Y6H6 103 aa11.39□□□□□ -0.59
LINC00339-213ENST00000642137 AKAP13Q12802 2813 aa11.39□□□□□ -0.59
LINC00339-213ENST00000642137 WWP2O00308 870 aa11.38□□□□□ -0.59
LINC00339-213ENST00000642137 NME4O00746 187 aa11.38□□□□□ -0.59
LINC00339-213ENST00000642137 CEACAM4O75871 244 aa11.38□□□□□ -0.59
LINC00339-213ENST00000642137 DNAJB5O75953 348 aa11.38□□□□□ -0.59
LINC00339-213ENST00000642137 NADKO95544 446 aaPredicted RBP11.38□□□□□ -0.59
LINC00339-213ENST00000642137 GUSBP08236 651 aa11.38□□□□□ -0.59
LINC00339-213ENST00000642137 PIGAP37287 484 aa11.38□□□□□ -0.59
LINC00339-213ENST00000642137 SLC7A2P52569 658 aa11.38□□□□□ -0.59
LINC00339-213ENST00000642137 NRG3P56975 720 aa11.38□□□□□ -0.59
LINC00339-213ENST00000642137 CORO7P57737 925 aa11.38□□□□□ -0.59
LINC00339-213ENST00000642137 POU6F2P78424 691 aaPredicted RBP11.38□□□□□ -0.59
LINC00339-213ENST00000642137 RBBP4Q09028 425 aa11.38□□□□□ -0.59
LINC00339-213ENST00000642137 DNAL1Q4LDG9 190 aa11.38□□□□□ -0.59
LINC00339-213ENST00000642137 CRB2Q5IJ48 1285 aa11.38□□□□□ -0.59
LINC00339-213ENST00000642137 ATAD3BQ5T9A4 648 aa11.38□□□□□ -0.59
LINC00339-213ENST00000642137 HEPHL1Q6MZM0 1159 aa11.38□□□□□ -0.59
LINC00339-213ENST00000642137 NET1Q7Z628 596 aaPredicted RBP11.38□□□□□ -0.59
LINC00339-213ENST00000642137 SLC34A3Q8N130 599 aa11.38□□□□□ -0.59
LINC00339-213ENST00000642137 OR4N2Q8NGD1 307 aa11.38□□□□□ -0.59
LINC00339-213ENST00000642137 SLC22A8Q8TCC7 542 aa11.38□□□□□ -0.59
LINC00339-213ENST00000642137 THAP3Q8WTV1 239 aaPredicted RBP11.38□□□□□ -0.59
LINC00339-213ENST00000642137 PIK3R3Q92569 461 aa11.38□□□□□ -0.59
LINC00339-213ENST00000642137 CDS1Q92903 461 aa11.38□□□□□ -0.59
LINC00339-213ENST00000642137 RAB8BQ92930 207 aa11.38□□□□□ -0.59
LINC00339-213ENST00000642137 TRIM8Q9BZR9 551 aa11.38□□□□□ -0.59
LINC00339-213ENST00000642137 STMN3Q9NZ72 180 aa11.38□□□□□ -0.59
LINC00339-213ENST00000642137 ADA2Q9NZK5 511 aa11.38□□□□□ -0.59
LINC00339-213ENST00000642137 PRPF19Q9UMS4 504 aaKnown RBP11.38□□□□□ -0.59
LINC00339-213ENST00000642137 OR10H1Q9Y4A9 318 aa11.38□□□□□ -0.59
LINC00339-213ENST00000642137 NPFFR2Q9Y5X5 522 aa11.38□□□□□ -0.59
LINC00339-213ENST00000642137 ACACAQ13085 2346 aa11.38□□□□□ -0.59
LINC00339-213ENST00000642137 APC2O95996 2303 aa11.37□□□□□ -0.59
LINC00339-213ENST00000642137 GXYLT2A0PJZ3 443 aa11.37□□□□□ -0.59
LINC00339-213ENST00000642137 PRAMEF27A3QJZ7 478 aa11.37□□□□□ -0.59
LINC00339-213ENST00000642137 TMEM247A6NEH6 219 aa11.37□□□□□ -0.59
LINC00339-213ENST00000642137 A8MVJ9 347 aa11.37□□□□□ -0.59
LINC00339-213ENST00000642137 GSC2O15499 205 aa11.37□□□□□ -0.59
LINC00339-213ENST00000642137 DNAJA2O60884 412 aa11.37□□□□□ -0.59
LINC00339-213ENST00000642137 ITGA10O75578 1167 aa11.37□□□□□ -0.59
LINC00339-213ENST00000642137 OR2J2O76002 312 aa11.37□□□□□ -0.59
LINC00339-213ENST00000642137 KCNK2O95069 426 aa11.37□□□□□ -0.59
LINC00339-213ENST00000642137 TFPTP0C1Z6 253 aa11.37□□□□□ -0.59
LINC00339-213ENST00000642137 ARAFP10398 606 aa11.37□□□□□ -0.59
LINC00339-213ENST00000642137 LCN1P31025 176 aa11.37□□□□□ -0.59
LINC00339-213ENST00000642137 SOX11P35716 441 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms