RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 NLGN4YQ8NFZ3 816 aaPredicted RBP12.99□□□□□ -0.33
PHGDH-233ENST00000642021 SUN3Q8TAQ9 357 aa12.99□□□□□ -0.33
PHGDH-233ENST00000642021 COX14Q96I36 57 aa12.99□□□□□ -0.33
PHGDH-233ENST00000642021 FAM46AQ96IP4 442 aaKnown RBP12.99□□□□□ -0.33
PHGDH-233ENST00000642021 TOX2Q96NM4 488 aa12.99□□□□□ -0.33
PHGDH-233ENST00000642021 PRRG3Q9BZD7 231 aa12.99□□□□□ -0.33
PHGDH-233ENST00000642021 RNF208Q9H0X6 261 aa12.99□□□□□ -0.33
PHGDH-233ENST00000642021 PPP1R3EQ9H7J1 279 aa12.99□□□□□ -0.33
PHGDH-233ENST00000642021 BCL2L10Q9HD36 194 aa12.99□□□□□ -0.33
PHGDH-233ENST00000642021 SEMA4GQ9NTN9 838 aa12.99□□□□□ -0.33
PHGDH-233ENST00000642021 IL20RAQ9UHF4 553 aa12.99□□□□□ -0.33
PHGDH-233ENST00000642021 NTNG1Q9Y2I2 539 aa12.99□□□□□ -0.33
PHGDH-233ENST00000642021 KIAA1549LQ6ZVL6 1849 aa12.99□□□□□ -0.33
PHGDH-233ENST00000642021 HEATR5BQ9P2D3 2071 aa12.99□□□□□ -0.33
PHGDH-233ENST00000642021 MAN2B1O00754 1011 aa12.99□□□□□ -0.33
PHGDH-233ENST00000642021 GNRH1P01148 92 aa12.99□□□□□ -0.33
PHGDH-233ENST00000642021 TRAPPC2P0DI81 140 aa12.99□□□□□ -0.33
PHGDH-233ENST00000642021 TRAPPC2BP0DI82 140 aa12.99□□□□□ -0.33
PHGDH-233ENST00000642021 CEBPBP17676 345 aa12.99□□□□□ -0.33
PHGDH-233ENST00000642021 TRHRP34981 398 aaPredicted RBP12.99□□□□□ -0.33
PHGDH-233ENST00000642021 VASPP50552 380 aaPredicted RBP12.99□□□□□ -0.33
PHGDH-233ENST00000642021 CLCNKAP51800 687 aa12.99□□□□□ -0.33
PHGDH-233ENST00000642021 ARHGAP19Q14CB8 494 aa12.99□□□□□ -0.33
PHGDH-233ENST00000642021 SNAP47Q5SQN1 464 aa12.99□□□□□ -0.33
PHGDH-233ENST00000642021 SLC30A6Q6NXT4 461 aa12.99□□□□□ -0.33
PHGDH-233ENST00000642021 CNIH2Q6PI25 160 aa12.99□□□□□ -0.33
PHGDH-233ENST00000642021 SLC36A4Q6YBV0 504 aa12.99□□□□□ -0.33
PHGDH-233ENST00000642021 ERN2Q76MJ5 926 aaKnown RBP12.99□□□□□ -0.33
PHGDH-233ENST00000642021 VRK2Q86Y07 508 aa12.99□□□□□ -0.33
PHGDH-233ENST00000642021 TMIEQ8NEW7 156 aa12.99□□□□□ -0.33
PHGDH-233ENST00000642021 UFD1Q92890 307 aa12.99□□□□□ -0.33
PHGDH-233ENST00000642021 CNRIP1Q96F85 164 aaPredicted RBP12.99□□□□□ -0.33
PHGDH-233ENST00000642021 SOSTQ9BQB4 213 aa12.99□□□□□ -0.33
PHGDH-233ENST00000642021 B3GAT2Q9NPZ5 323 aa12.99□□□□□ -0.33
PHGDH-233ENST00000642021 ATG4BQ9Y4P1 393 aa12.99□□□□□ -0.33
PHGDH-233ENST00000642021 IRAK3Q9Y616 596 aa12.99□□□□□ -0.33
PHGDH-233ENST00000642021 KIF26AQ9ULI4 1882 aaPredicted RBP12.99□□□□□ -0.33
PHGDH-233ENST00000642021 A0A1W2PR48 441 aa12.98□□□□□ -0.33
PHGDH-233ENST00000642021 CPSF4LA6NMK7 179 aaKnown RBP12.98□□□□□ -0.33
PHGDH-233ENST00000642021 FAM170BA6NMN3 283 aa12.98□□□□□ -0.33
PHGDH-233ENST00000642021 CASKO14936 926 aa12.98□□□□□ -0.33
PHGDH-233ENST00000642021 FGBP02675 491 aa12.98□□□□□ -0.33
PHGDH-233ENST00000642021 PCCBP05166 539 aa12.98□□□□□ -0.33
PHGDH-233ENST00000642021 GABRA5P31644 462 aa12.98□□□□□ -0.33
PHGDH-233ENST00000642021 VIPR2P41587 438 aa12.98□□□□□ -0.33
PHGDH-233ENST00000642021 TAS2R38P59533 333 aa12.98□□□□□ -0.33
PHGDH-233ENST00000642021 ZNF155Q12901 538 aaPredicted RBP12.98□□□□□ -0.33
PHGDH-233ENST00000642021 CD200R1LQ6Q8B3 271 aa12.98□□□□□ -0.33
PHGDH-233ENST00000642021 MRGPREQ86SM8 312 aa12.98□□□□□ -0.33
PHGDH-233ENST00000642021 OR8K5Q8NH50 307 aa12.98□□□□□ -0.33
PHGDH-233ENST00000642021 TEX47Q8TBZ9 253 aa12.98□□□□□ -0.33
PHGDH-233ENST00000642021 GIMAP1Q8WWP7 306 aa12.98□□□□□ -0.33
PHGDH-233ENST00000642021 OTUB2Q96DC9 234 aa12.98□□□□□ -0.33
PHGDH-233ENST00000642021 BBS4Q96RK4 519 aa12.98□□□□□ -0.33
PHGDH-233ENST00000642021 ZNF649Q9BS31 505 aa12.98□□□□□ -0.33
PHGDH-233ENST00000642021 TMED9Q9BVK6 235 aa12.98□□□□□ -0.33
PHGDH-233ENST00000642021 TBC1D17Q9HA65 648 aa12.98□□□□□ -0.33
PHGDH-233ENST00000642021 LIPT1Q9Y234 373 aa12.98□□□□□ -0.33
PHGDH-233ENST00000642021 UBXN7O94888 489 aa12.98□□□□□ -0.33
PHGDH-233ENST00000642021 EPCAMP16422 314 aa12.98□□□□□ -0.33
PHGDH-233ENST00000642021 PTNP21246 168 aa12.98□□□□□ -0.33
PHGDH-233ENST00000642021 SLC1A3P43003 542 aa12.98□□□□□ -0.33
PHGDH-233ENST00000642021 CHRNEQ04844 493 aa12.98□□□□□ -0.33
PHGDH-233ENST00000642021 UBE3AQ05086 875 aa12.98□□□□□ -0.33
PHGDH-233ENST00000642021 RPA4Q13156 261 aa12.98□□□□□ -0.33
PHGDH-233ENST00000642021 FAM214AQ32MH5 1076 aa12.98□□□□□ -0.33
PHGDH-233ENST00000642021 MINDY4Q4G0A6 757 aa12.98□□□□□ -0.33
PHGDH-233ENST00000642021 TMEM107Q6UX40 140 aa12.98□□□□□ -0.33
PHGDH-233ENST00000642021 CACUL1Q86Y37 369 aa12.98□□□□□ -0.33
PHGDH-233ENST00000642021 GRAMD2AQ8IUY3 354 aa12.98□□□□□ -0.33
PHGDH-233ENST00000642021 Q8N402 240 aa12.98□□□□□ -0.33
PHGDH-233ENST00000642021 MRPL43Q8N983 215 aaKnown RBP12.98□□□□□ -0.33
PHGDH-233ENST00000642021 BBS1Q8NFJ9 593 aa12.98□□□□□ -0.33
PHGDH-233ENST00000642021 OR4Q3Q8NH05 313 aa12.98□□□□□ -0.33
PHGDH-233ENST00000642021 BBS10Q8TAM1 723 aa12.98□□□□□ -0.33
PHGDH-233ENST00000642021 OR8D1Q8WZ84 308 aa12.98□□□□□ -0.33
PHGDH-233ENST00000642021 ZNF764Q96H86 408 aaPredicted RBP12.98□□□□□ -0.33
PHGDH-233ENST00000642021 TRMT61BQ9BVS5 477 aaKnown RBP12.98□□□□□ -0.33
PHGDH-233ENST00000642021 CFHR5Q9BXR6 569 aa12.98□□□□□ -0.33
PHGDH-233ENST00000642021 TMEM245Q9H330 911 aa12.98□□□□□ -0.33
PHGDH-233ENST00000642021 SYNPO2LQ9H987 977 aa12.98□□□□□ -0.33
PHGDH-233ENST00000642021 CLCA3PQ9Y6N3 262 aa12.98□□□□□ -0.33
PHGDH-233ENST00000642021 C2orf92A0A1B0GVN3 265 aa12.98□□□□□ -0.33
PHGDH-233ENST00000642021 SLC2A10O95528 541 aa12.98□□□□□ -0.33
PHGDH-233ENST00000642021 GNSP15586 552 aa12.98□□□□□ -0.33
PHGDH-233ENST00000642021 CELP19835 753 aa12.98□□□□□ -0.33
PHGDH-233ENST00000642021 FGF9P31371 208 aaPredicted RBP12.98□□□□□ -0.33
PHGDH-233ENST00000642021 TAS2R41P59536 307 aa12.98□□□□□ -0.33
PHGDH-233ENST00000642021 MLF2Q15773 248 aaPredicted RBP12.98□□□□□ -0.33
PHGDH-233ENST00000642021 PIP5KL1Q5T9C9 394 aa12.98□□□□□ -0.33
PHGDH-233ENST00000642021 C18orf63Q68DL7 685 aa12.98□□□□□ -0.33
PHGDH-233ENST00000642021 B3GLCTQ6Y288 498 aa12.98□□□□□ -0.33
PHGDH-233ENST00000642021 LRRTM4Q86VH4 590 aa12.98□□□□□ -0.33
PHGDH-233ENST00000642021 NKAIN4Q8IVV8 208 aa12.98□□□□□ -0.33
PHGDH-233ENST00000642021 ARIH2OSQ8N7S6 290 aa12.98□□□□□ -0.33
PHGDH-233ENST00000642021 NECTIN4Q96NY8 510 aa12.98□□□□□ -0.33
PHGDH-233ENST00000642021 ATF6BQ99941 703 aa12.98□□□□□ -0.33
PHGDH-233ENST00000642021 EQTNQ9NQ60 294 aa12.98□□□□□ -0.33
PHGDH-233ENST00000642021 ADAM29Q9UKF5 820 aa12.98□□□□□ -0.33
PHGDH-233ENST00000642021 KDM4EB2RXH2 506 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms