RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 TIGD3Q6B0B8 471 aa16.2■□□□□ 0.18
PTPN11-207ENST00000639857 DDIASQ8IXT1 998 aa16.2■□□□□ 0.18
PTPN11-207ENST00000639857 MARVELD2Q8N4S9 558 aa16.2■□□□□ 0.18
PTPN11-207ENST00000639857 ZFP28Q8NHY6 868 aa16.2■□□□□ 0.18
PTPN11-207ENST00000639857 CA5BP1Q8WTZ4 195 aa16.2■□□□□ 0.18
PTPN11-207ENST00000639857 TMBIM1Q969X1 311 aa16.2■□□□□ 0.18
PTPN11-207ENST00000639857 EGLN2Q96KS0 407 aa16.2■□□□□ 0.18
PTPN11-207ENST00000639857 GLIPR2Q9H4G4 154 aa16.2■□□□□ 0.18
PTPN11-207ENST00000639857 REEP4Q9H6H4 257 aa16.2■□□□□ 0.18
PTPN11-207ENST00000639857 DDX18Q9NVP1 670 aaKnown RBP16.2■□□□□ 0.18
PTPN11-207ENST00000639857 SPRR3Q9UBC9 169 aa16.2■□□□□ 0.18
PTPN11-207ENST00000639857 ACAD8Q9UKU7 415 aa16.2■□□□□ 0.18
PTPN11-207ENST00000639857 CENPEQ02224 2701 aa16.2■□□□□ 0.18
PTPN11-207ENST00000639857 HCFC1P51610 2035 aa16.19■□□□□ 0.18
PTPN11-207ENST00000639857 PRAMEF25A6NGN4 478 aa16.19■□□□□ 0.18
PTPN11-207ENST00000639857 TMEM233B4DJY2 109 aa16.19■□□□□ 0.18
PTPN11-207ENST00000639857 PIP5K1BO14986 540 aa16.19■□□□□ 0.18
PTPN11-207ENST00000639857 SNPHO15079 494 aa16.19■□□□□ 0.18
PTPN11-207ENST00000639857 BIRC5O15392 142 aa16.19■□□□□ 0.18
PTPN11-207ENST00000639857 PDPK1O15530 556 aa16.19■□□□□ 0.18
PTPN11-207ENST00000639857 TSPAN2O60636 221 aa16.19■□□□□ 0.18
PTPN11-207ENST00000639857 PTPN6P29350 595 aa16.19■□□□□ 0.18
PTPN11-207ENST00000639857 CHRNB4P30926 498 aa16.19■□□□□ 0.18
PTPN11-207ENST00000639857 RPL3P39023 403 aaKnown RBP16.19■□□□□ 0.18
PTPN11-207ENST00000639857 MC3RP41968 323 aa16.19■□□□□ 0.18
PTPN11-207ENST00000639857 FRKP42685 505 aaPredicted RBP16.19■□□□□ 0.18
PTPN11-207ENST00000639857 SERPINB4P48594 390 aa16.19■□□□□ 0.18
PTPN11-207ENST00000639857 CDK9P50750 372 aaKnown RBP16.19■□□□□ 0.18
PTPN11-207ENST00000639857 PNLIPRP2P54317 469 aa16.19■□□□□ 0.18
PTPN11-207ENST00000639857 CORO7P57737 925 aa16.19■□□□□ 0.18
PTPN11-207ENST00000639857 PSG6Q00889 435 aa16.19■□□□□ 0.18
PTPN11-207ENST00000639857 PRSS53Q2L4Q9 553 aa16.19■□□□□ 0.18
PTPN11-207ENST00000639857 CYP27C1Q4G0S4 372 aa16.19■□□□□ 0.18
PTPN11-207ENST00000639857 NHSL2Q5HYW2 709 aa16.19■□□□□ 0.18
PTPN11-207ENST00000639857 LRIG3Q6UXM1 1119 aa16.19■□□□□ 0.18
PTPN11-207ENST00000639857 B3GNT6Q6ZMB0 384 aa16.19■□□□□ 0.18
PTPN11-207ENST00000639857 ZCCHC23Q6ZST2 131 aa16.19■□□□□ 0.18
PTPN11-207ENST00000639857 NCCRP1Q6ZVX7 275 aaPredicted RBP16.19■□□□□ 0.18
PTPN11-207ENST00000639857 R3HCC1LQ7Z5L2 792 aaKnown RBP16.19■□□□□ 0.18
PTPN11-207ENST00000639857 KIRREL3Q8IZU9 778 aa16.19■□□□□ 0.18
PTPN11-207ENST00000639857 OR1J4Q8NGS1 313 aa16.19■□□□□ 0.18
PTPN11-207ENST00000639857 RNF138Q8WVD3 245 aa16.19■□□□□ 0.18
PTPN11-207ENST00000639857 MARVELD3Q96A59 401 aa16.19■□□□□ 0.18
PTPN11-207ENST00000639857 SDCCAG3Q96C92 435 aa16.19■□□□□ 0.18
PTPN11-207ENST00000639857 PPCDCQ96CD2 204 aa16.19■□□□□ 0.18
PTPN11-207ENST00000639857 ELP4Q96EB1 424 aa16.19■□□□□ 0.18
PTPN11-207ENST00000639857 ZBED6CLQ96FA7 236 aaPredicted RBP16.19■□□□□ 0.18
PTPN11-207ENST00000639857 PGM2Q96G03 612 aa16.19■□□□□ 0.18
PTPN11-207ENST00000639857 ZIM3Q96PE6 472 aa16.19■□□□□ 0.18
PTPN11-207ENST00000639857 NODALQ96S42 347 aa16.19■□□□□ 0.18
PTPN11-207ENST00000639857 ANKRA2Q9H9E1 313 aa16.19■□□□□ 0.18
PTPN11-207ENST00000639857 ACSS1Q9NUB1 689 aaPredicted RBP16.19■□□□□ 0.18
PTPN11-207ENST00000639857 KLRF1Q9NZS2 232 aa16.19■□□□□ 0.18
PTPN11-207ENST00000639857 UPK1AO00322 258 aa16.18■□□□□ 0.18
PTPN11-207ENST00000639857 ICOSLGO75144 302 aa16.18■□□□□ 0.18
PTPN11-207ENST00000639857 REM1O75628 298 aa16.18■□□□□ 0.18
PTPN11-207ENST00000639857 ZWINTO95229 277 aa16.18■□□□□ 0.18
PTPN11-207ENST00000639857 MYZAPP0CAP1 466 aa16.18■□□□□ 0.18
PTPN11-207ENST00000639857 GRNP28799 593 aaKnown RBP16.18■□□□□ 0.18
PTPN11-207ENST00000639857 IL12BP29460 328 aa16.18■□□□□ 0.18
PTPN11-207ENST00000639857 PTGDSP41222 190 aa16.18■□□□□ 0.18
PTPN11-207ENST00000639857 ZNF155Q12901 538 aaPredicted RBP16.18■□□□□ 0.18
PTPN11-207ENST00000639857 ZNHIT3Q15649 155 aaPredicted RBP16.18■□□□□ 0.18
PTPN11-207ENST00000639857 ATP6AP1LQ52LC2 224 aa16.18■□□□□ 0.18
PTPN11-207ENST00000639857 TMEM107Q6UX40 140 aa16.18■□□□□ 0.18
PTPN11-207ENST00000639857 ANGPTL8Q6UXH0 198 aa16.18■□□□□ 0.18
PTPN11-207ENST00000639857 NPSR1Q6W5P4 371 aa16.18■□□□□ 0.18
PTPN11-207ENST00000639857 EXOC3L1Q86VI1 746 aa16.18■□□□□ 0.18
PTPN11-207ENST00000639857 NUDCD3Q8IVD9 361 aa16.18■□□□□ 0.18
PTPN11-207ENST00000639857 TSSK3Q96PN8 268 aa16.18■□□□□ 0.18
PTPN11-207ENST00000639857 SLC6A15Q9H2J7 730 aa16.18■□□□□ 0.18
PTPN11-207ENST00000639857 OR10H1Q9Y4A9 318 aa16.18■□□□□ 0.18
PTPN11-207ENST00000639857 PKDREJQ9NTG1 2253 aa16.18■□□□□ 0.18
PTPN11-207ENST00000639857 ITPR2Q14571 2701 aa16.18■□□□□ 0.18
PTPN11-207ENST00000639857 SERPINE1P05121 402 aa16.17■□□□□ 0.18
PTPN11-207ENST00000639857 DHRS4L1P0CG22 281 aa16.17■□□□□ 0.18
PTPN11-207ENST00000639857 BCKDHAP12694 445 aa16.17■□□□□ 0.18
PTPN11-207ENST00000639857 ARRB2P32121 409 aa16.17■□□□□ 0.18
PTPN11-207ENST00000639857 CRYZQ08257 329 aaKnown RBP16.17■□□□□ 0.18
PTPN11-207ENST00000639857 SF3B4Q15427 424 aaKnown RBP eCLIP16.17■□□□□ 0.18
PTPN11-207ENST00000639857 GALNTL6Q49A17 601 aa16.17■□□□□ 0.18
PTPN11-207ENST00000639857 CEP85LQ5SZL2 805 aa16.17■□□□□ 0.18
PTPN11-207ENST00000639857 C1orf185Q5T7R7 199 aa16.17■□□□□ 0.18
PTPN11-207ENST00000639857 ZNF585AQ6P3V2 769 aa16.17■□□□□ 0.18
PTPN11-207ENST00000639857 LARP4Q71RC2 724 aaKnown RBP eCLIP16.17■□□□□ 0.18
PTPN11-207ENST00000639857 SLC44A2Q8IWA5 706 aaPredicted RBP16.17■□□□□ 0.18
PTPN11-207ENST00000639857 PM20D2Q8IYS1 436 aa16.17■□□□□ 0.18
PTPN11-207ENST00000639857 OR5M9Q8NGP3 310 aa16.17■□□□□ 0.18
PTPN11-207ENST00000639857 LILRB4Q8NHJ6 448 aa16.17■□□□□ 0.18
PTPN11-207ENST00000639857 PPP1R14CQ8TAE6 165 aa16.17■□□□□ 0.18
PTPN11-207ENST00000639857 GNRHR2Q96P88 292 aa16.17■□□□□ 0.18
PTPN11-207ENST00000639857 TTYH2Q9BSA4 534 aa16.17■□□□□ 0.18
PTPN11-207ENST00000639857 LMF2Q9BU23 707 aaKnown RBP16.17■□□□□ 0.18
PTPN11-207ENST00000639857 Q9N2J8 555 aa16.17■□□□□ 0.18
PTPN11-207ENST00000639857 NTMQ9P121 344 aa16.17■□□□□ 0.18
PTPN11-207ENST00000639857 MRTO4Q9UKD2 239 aaKnown RBP16.17■□□□□ 0.18
PTPN11-207ENST00000639857 RNF6Q9Y252 685 aa16.17■□□□□ 0.18
PTPN11-207ENST00000639857 FAM215AQ9Y5M1 114 aa16.17■□□□□ 0.18
PTPN11-207ENST00000639857 WIF1Q9Y5W5 379 aa16.17■□□□□ 0.18
PTPN11-207ENST00000639857 C15orf38-AP3S2A0A0A6YYH1 394 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms