RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 TRPV3Q8NET8 790 aa-0.58□□□□□ -2.5
LMBR1-222ENST00000638959 OR2L3Q8NG85 312 aa-0.58□□□□□ -2.5
LMBR1-222ENST00000638959 DNAJA4Q8WW22 397 aaPredicted RBP-0.58□□□□□ -2.5
LMBR1-222ENST00000638959 RFFLQ8WZ73 363 aa-0.58□□□□□ -2.5
LMBR1-222ENST00000638959 UCN3Q969E3 161 aa-0.58□□□□□ -2.5
LMBR1-222ENST00000638959 RASL11BQ9BPW5 248 aa-0.58□□□□□ -2.5
LMBR1-222ENST00000638959 C19orf43Q9BQ61 176 aa-0.58□□□□□ -2.5
LMBR1-222ENST00000638959 TM2D1Q9BX74 207 aa-0.58□□□□□ -2.5
LMBR1-222ENST00000638959 MYOZ1Q9NP98 299 aaPredicted RBP-0.58□□□□□ -2.5
LMBR1-222ENST00000638959 CENPMQ9NSP4 180 aa-0.58□□□□□ -2.5
LMBR1-222ENST00000638959 PCDHGA1Q9Y5H4 931 aa-0.58□□□□□ -2.5
LMBR1-222ENST00000638959 PLXNB1O43157 2135 aa-0.58□□□□□ -2.5
LMBR1-222ENST00000638959 VWDEQ8N2E2 1590 aa-0.58□□□□□ -2.5
LMBR1-222ENST00000638959 CCDC162PA2VCL2 907 aa-0.59□□□□□ -2.5
LMBR1-222ENST00000638959 PI4KAP2A4QPH2 592 aa-0.59□□□□□ -2.5
LMBR1-222ENST00000638959 ZNF264O43296 627 aa-0.59□□□□□ -2.5
LMBR1-222ENST00000638959 OR10H3O60404 316 aa-0.59□□□□□ -2.5
LMBR1-222ENST00000638959 VAMP5O95183 116 aa-0.59□□□□□ -2.5
LMBR1-222ENST00000638959 ADRA2AP08913 450 aa-0.59□□□□□ -2.5
LMBR1-222ENST00000638959 PNMA6AP0CW24 399 aaPredicted RBP-0.59□□□□□ -2.5
LMBR1-222ENST00000638959 LAMP2P13473 410 aa-0.59□□□□□ -2.5
LMBR1-222ENST00000638959 ZNF250P15622 560 aa-0.59□□□□□ -2.5
LMBR1-222ENST00000638959 TSPAN8P19075 237 aa-0.59□□□□□ -2.5
LMBR1-222ENST00000638959 VDAC1P21796 283 aa-0.59□□□□□ -2.5
LMBR1-222ENST00000638959 PCGF2P35227 344 aa-0.59□□□□□ -2.5
LMBR1-222ENST00000638959 TNFSF9P41273 254 aa-0.59□□□□□ -2.5
LMBR1-222ENST00000638959 EFNB2P52799 333 aa-0.59□□□□□ -2.5
LMBR1-222ENST00000638959 CRISP3P54108 245 aa-0.59□□□□□ -2.5
LMBR1-222ENST00000638959 PRPS1P60891 318 aa-0.59□□□□□ -2.5
LMBR1-222ENST00000638959 RPP38P78345 283 aaKnown RBP-0.59□□□□□ -2.5
LMBR1-222ENST00000638959 DEFB103AP81534 67 aa-0.59□□□□□ -2.5
LMBR1-222ENST00000638959 PRKCDQ05655 676 aa-0.59□□□□□ -2.5
LMBR1-222ENST00000638959 PSG5Q15238 335 aa-0.59□□□□□ -2.5
LMBR1-222ENST00000638959 C15orf59Q2T9L4 293 aaPredicted RBP-0.59□□□□□ -2.5
LMBR1-222ENST00000638959 LGSNQ5TDP6 509 aa-0.59□□□□□ -2.5
LMBR1-222ENST00000638959 MEDAGQ5VYS4 303 aa-0.59□□□□□ -2.5
LMBR1-222ENST00000638959 CLEC4GQ6UXB4 293 aa-0.59□□□□□ -2.5
LMBR1-222ENST00000638959 KRTAP19-3Q7Z4W3 81 aa-0.59□□□□□ -2.5
LMBR1-222ENST00000638959 TLK2Q86UE8 772 aa-0.59□□□□□ -2.5
LMBR1-222ENST00000638959 DZIP1Q86YF9 867 aaKnown RBP-0.59□□□□□ -2.5
LMBR1-222ENST00000638959 ZNF622Q969S3 477 aaKnown RBP eCLIP-0.59□□□□□ -2.5
LMBR1-222ENST00000638959 PTERQ96BW5 349 aa-0.59□□□□□ -2.5
LMBR1-222ENST00000638959 PCED1BQ96HM7 432 aa-0.59□□□□□ -2.5
LMBR1-222ENST00000638959 SPATA33Q96N06 139 aa-0.59□□□□□ -2.5
LMBR1-222ENST00000638959 ZNF830Q96NB3 372 aaPredicted RBP-0.59□□□□□ -2.5
LMBR1-222ENST00000638959 FAM129AQ9BZQ8 928 aa-0.59□□□□□ -2.5
LMBR1-222ENST00000638959 TMEM245Q9H330 911 aa-0.59□□□□□ -2.5
LMBR1-222ENST00000638959 ZNF665Q9H7R5 613 aa-0.59□□□□□ -2.5
LMBR1-222ENST00000638959 CNOT10Q9H9A5 744 aaKnown RBP-0.59□□□□□ -2.5
LMBR1-222ENST00000638959 TBC1D29Q9UFV1 150 aa-0.59□□□□□ -2.5
LMBR1-222ENST00000638959 MTRF1LQ9UGC7 380 aaKnown RBP-0.59□□□□□ -2.5
LMBR1-222ENST00000638959 FBXL5Q9UKA1 691 aa-0.59□□□□□ -2.5
LMBR1-222ENST00000638959 S4R3C0 116 aa-0.59□□□□□ -2.5
LMBR1-222ENST00000638959 A0A1W2PPW3 197 aa-0.6□□□□□ -2.51
LMBR1-222ENST00000638959 IGKV2-29A2NJV5 120 aaPredicted RBP-0.6□□□□□ -2.51
LMBR1-222ENST00000638959 YDJCA8MPS7 323 aa-0.6□□□□□ -2.51
LMBR1-222ENST00000638959 C3orf84H3BNL1 204 aa-0.6□□□□□ -2.51
LMBR1-222ENST00000638959 TYROBPO43914 113 aa-0.6□□□□□ -2.51
LMBR1-222ENST00000638959 EFNA2O43921 213 aa-0.6□□□□□ -2.51
LMBR1-222ENST00000638959 FAM189A1O60320 539 aa-0.6□□□□□ -2.51
LMBR1-222ENST00000638959 AKR7A3O95154 331 aa-0.6□□□□□ -2.51
LMBR1-222ENST00000638959 ANP32DO95626 131 aa-0.6□□□□□ -2.51
LMBR1-222ENST00000638959 ECDO95905 644 aaPredicted RBP-0.6□□□□□ -2.51
LMBR1-222ENST00000638959 NR2F1P10589 423 aa-0.6□□□□□ -2.51
LMBR1-222ENST00000638959 PAX3P23760 479 aa-0.6□□□□□ -2.51
LMBR1-222ENST00000638959 TM4SF1P30408 202 aa-0.6□□□□□ -2.51
LMBR1-222ENST00000638959 METAP1P53582 386 aa-0.6□□□□□ -2.51
LMBR1-222ENST00000638959 IL9RQ01113 521 aa-0.6□□□□□ -2.51
LMBR1-222ENST00000638959 ENPEPQ07075 957 aa-0.6□□□□□ -2.51
LMBR1-222ENST00000638959 PPP2R5CQ13362 524 aa-0.6□□□□□ -2.51
LMBR1-222ENST00000638959 GNMTQ14749 295 aa-0.6□□□□□ -2.51
LMBR1-222ENST00000638959 PTPRCAPQ14761 206 aa-0.6□□□□□ -2.51
LMBR1-222ENST00000638959 KLHL10Q6JEL2 608 aa-0.6□□□□□ -2.51
LMBR1-222ENST00000638959 Q6ZRG5 221 aa-0.6□□□□□ -2.51
LMBR1-222ENST00000638959 PCP2Q8IVA1 136 aa-0.6□□□□□ -2.51
LMBR1-222ENST00000638959 ZNF683Q8IZ20 524 aa-0.6□□□□□ -2.51
LMBR1-222ENST00000638959 CCDC197Q8NCU1 140 aa-0.6□□□□□ -2.51
LMBR1-222ENST00000638959 C1orf64Q8NEQ6 169 aa-0.6□□□□□ -2.51
LMBR1-222ENST00000638959 TSPAN14Q8NG11 270 aa-0.6□□□□□ -2.51
LMBR1-222ENST00000638959 FNDC8Q8TC99 324 aa-0.6□□□□□ -2.51
LMBR1-222ENST00000638959 USP6NLQ92738 828 aa-0.6□□□□□ -2.51
LMBR1-222ENST00000638959 ARHGDIGQ99819 225 aa-0.6□□□□□ -2.51
LMBR1-222ENST00000638959 ITPAQ9BY32 194 aa-0.6□□□□□ -2.51
LMBR1-222ENST00000638959 EXOSC3Q9NQT5 275 aaKnown RBP-0.6□□□□□ -2.51
LMBR1-222ENST00000638959 SLC2A8Q9NY64 477 aa-0.6□□□□□ -2.51
LMBR1-222ENST00000638959 FOXA2Q9Y261 457 aaPredicted RBP-0.6□□□□□ -2.51
LMBR1-222ENST00000638959 ETV7Q9Y603 341 aa-0.6□□□□□ -2.51
LMBR1-222ENST00000638959 SF3B1O75533 1304 aaKnown RBP eCLIP-0.61□□□□□ -2.51
LMBR1-222ENST00000638959 A0A0J9YXV3 536 aa-0.61□□□□□ -2.51
LMBR1-222ENST00000638959 CCDC188H7C350 402 aa-0.61□□□□□ -2.51
LMBR1-222ENST00000638959 CHST1O43916 411 aa-0.61□□□□□ -2.51
LMBR1-222ENST00000638959 LUC7L3O95232 432 aaKnown RBP-0.61□□□□□ -2.51
LMBR1-222ENST00000638959 MOSP00540 346 aa-0.61□□□□□ -2.51
LMBR1-222ENST00000638959 GHRP10912 638 aa-0.61□□□□□ -2.51
LMBR1-222ENST00000638959 PGAM1P18669 254 aa-0.61□□□□□ -2.51
LMBR1-222ENST00000638959 MAPK4P31152 587 aa-0.61□□□□□ -2.51
LMBR1-222ENST00000638959 STAT2P52630 851 aa-0.61□□□□□ -2.51
LMBR1-222ENST00000638959 MAMLD1Q13495 774 aa-0.61□□□□□ -2.51
LMBR1-222ENST00000638959 ARFRP1Q13795 201 aa-0.61□□□□□ -2.51
LMBR1-222ENST00000638959 AANATQ16613 207 aa-0.61□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms