RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 SPACA9Q96E40 222 aaPredicted RBP7.2□□□□□ -1.26
PNKP-229ENST00000637897 CNRIP1Q96F85 164 aaPredicted RBP7.2□□□□□ -1.26
PNKP-229ENST00000637897 PPP1R36Q96LQ0 422 aa7.2□□□□□ -1.26
PNKP-229ENST00000637897 DGAT2Q96PD7 388 aa7.2□□□□□ -1.26
PNKP-229ENST00000637897 UBQLN3Q9H347 655 aa7.2□□□□□ -1.26
PNKP-229ENST00000637897 ZNF703Q9H7S9 590 aaPredicted RBP7.2□□□□□ -1.26
PNKP-229ENST00000637897 ANKRA2Q9H9E1 313 aa7.2□□□□□ -1.26
PNKP-229ENST00000637897 IL1RL2Q9HB29 575 aa7.2□□□□□ -1.26
PNKP-229ENST00000637897 SUCOQ9UBS9 1254 aaKnown RBP7.2□□□□□ -1.26
PNKP-229ENST00000637897 ADGRE2Q9UHX3 823 aa7.2□□□□□ -1.26
PNKP-229ENST00000637897 PHF11Q9UIL8 331 aa7.2□□□□□ -1.26
PNKP-229ENST00000637897 EXO1Q9UQ84 846 aaKnown RBP7.2□□□□□ -1.26
PNKP-229ENST00000637897 ERVK-11Q9UQG0 969 aa7.2□□□□□ -1.26
PNKP-229ENST00000637897 PCDHA9Q9Y5H5 950 aa7.2□□□□□ -1.26
PNKP-229ENST00000637897 CELSR1Q9NYQ6 3014 aa7.2□□□□□ -1.26
PNKP-229ENST00000637897 ARHGAP21Q5T5U3 1957 aa7.19□□□□□ -1.26
PNKP-229ENST00000637897 UBDO15205 165 aa7.19□□□□□ -1.26
PNKP-229ENST00000637897 ESRRBO95718 433 aa7.19□□□□□ -1.26
PNKP-229ENST00000637897 JUNP05412 331 aaKnown RBP7.19□□□□□ -1.26
PNKP-229ENST00000637897 GLI4P10075 376 aa7.19□□□□□ -1.26
PNKP-229ENST00000637897 UROSP10746 265 aa7.19□□□□□ -1.26
PNKP-229ENST00000637897 CPMP14384 443 aa7.19□□□□□ -1.26
PNKP-229ENST00000637897 GPX3P22352 226 aa7.19□□□□□ -1.26
PNKP-229ENST00000637897 CPOXP36551 454 aa7.19□□□□□ -1.26
PNKP-229ENST00000637897 CCNG1P51959 295 aa7.19□□□□□ -1.26
PNKP-229ENST00000637897 DLX5P56178 289 aa7.19□□□□□ -1.26
PNKP-229ENST00000637897 WNT3P56703 355 aa7.19□□□□□ -1.26
PNKP-229ENST00000637897 FBXW4P57775 412 aa7.19□□□□□ -1.26
PNKP-229ENST00000637897 STX1BP61266 288 aa7.19□□□□□ -1.26
PNKP-229ENST00000637897 PMPCAQ10713 525 aa7.19□□□□□ -1.26
PNKP-229ENST00000637897 STX5Q13190 355 aa7.19□□□□□ -1.26
PNKP-229ENST00000637897 TESK1Q15569 626 aa7.19□□□□□ -1.26
PNKP-229ENST00000637897 LTB4RQ15722 352 aa7.19□□□□□ -1.26
PNKP-229ENST00000637897 TRMT5Q32P41 509 aaKnown RBP7.19□□□□□ -1.26
PNKP-229ENST00000637897 UGT3A2Q3SY77 523 aa7.19□□□□□ -1.26
PNKP-229ENST00000637897 DCST1Q5T197 706 aa7.19□□□□□ -1.26
PNKP-229ENST00000637897 NDUFAF5Q5TEU4 345 aa7.19□□□□□ -1.26
PNKP-229ENST00000637897 CLEC6AQ6EIG7 209 aa7.19□□□□□ -1.26
PNKP-229ENST00000637897 SLC48A1Q6P1K1 146 aa7.19□□□□□ -1.26
PNKP-229ENST00000637897 ARHGAP11AQ6P4F7 1023 aa7.19□□□□□ -1.26
PNKP-229ENST00000637897 C16orf89Q6UX73 402 aa7.19□□□□□ -1.26
PNKP-229ENST00000637897 GPRIN3Q6ZVF9 776 aa7.19□□□□□ -1.26
PNKP-229ENST00000637897 LARP4Q71RC2 724 aaKnown RBP eCLIP7.19□□□□□ -1.26
PNKP-229ENST00000637897 COMMD6Q7Z4G1 85 aa7.19□□□□□ -1.26
PNKP-229ENST00000637897 NET1Q7Z628 596 aaPredicted RBP7.19□□□□□ -1.26
PNKP-229ENST00000637897 MILR1Q7Z6M3 343 aa7.19□□□□□ -1.26
PNKP-229ENST00000637897 NUDT13Q86X67 352 aa7.19□□□□□ -1.26
PNKP-229ENST00000637897 LRRC25Q8N386 305 aaPredicted RBP7.19□□□□□ -1.26
PNKP-229ENST00000637897 FBXW8Q8N3Y1 598 aa7.19□□□□□ -1.26
PNKP-229ENST00000637897 FAM109AQ8N4B1 249 aa7.19□□□□□ -1.26
PNKP-229ENST00000637897 POU5F2Q8N7G0 328 aa7.19□□□□□ -1.26
PNKP-229ENST00000637897 NAXEQ8NCW5 288 aa7.19□□□□□ -1.26
PNKP-229ENST00000637897 OR5L2Q8NGL0 311 aa7.19□□□□□ -1.26
PNKP-229ENST00000637897 LILRB4Q8NHJ6 448 aa7.19□□□□□ -1.26
PNKP-229ENST00000637897 TRPC4APQ8TEL6 797 aa7.19□□□□□ -1.26
PNKP-229ENST00000637897 TWIST2Q8WVJ9 160 aa7.19□□□□□ -1.26
PNKP-229ENST00000637897 RIT1Q92963 219 aa7.19□□□□□ -1.26
PNKP-229ENST00000637897 HGDQ93099 445 aa7.19□□□□□ -1.26
PNKP-229ENST00000637897 APIPQ96GX9 242 aa7.19□□□□□ -1.26
PNKP-229ENST00000637897 SGCZQ96LD1 299 aa7.19□□□□□ -1.26
PNKP-229ENST00000637897 LURAP1Q96LR2 239 aa7.19□□□□□ -1.26
PNKP-229ENST00000637897 KCNA7Q96RP8 456 aa7.19□□□□□ -1.26
PNKP-229ENST00000637897 ZNF382Q96SR6 550 aa7.19□□□□□ -1.26
PNKP-229ENST00000637897 SERPINI1Q99574 410 aa7.19□□□□□ -1.26
PNKP-229ENST00000637897 FAM173AQ9BQD7 235 aa7.19□□□□□ -1.26
PNKP-229ENST00000637897 THTPAQ9BU02 230 aa7.19□□□□□ -1.26
PNKP-229ENST00000637897 ACPTQ9BZG2 426 aa7.19□□□□□ -1.26
PNKP-229ENST00000637897 NXF5Q9H1B4 397 aaKnown RBP7.19□□□□□ -1.26
PNKP-229ENST00000637897 SLC6A15Q9H2J7 730 aa7.19□□□□□ -1.26
PNKP-229ENST00000637897 DCLRE1BQ9H816 532 aa7.19□□□□□ -1.26
PNKP-229ENST00000637897 SACM1LQ9NTJ5 587 aa7.19□□□□□ -1.26
PNKP-229ENST00000637897 LYARQ9NX58 379 aaKnown RBP7.19□□□□□ -1.26
PNKP-229ENST00000637897 MS4A12Q9NXJ0 267 aa7.19□□□□□ -1.26
PNKP-229ENST00000637897 MAT2BQ9NZL9 334 aa7.19□□□□□ -1.26
PNKP-229ENST00000637897 TRPS1Q9UHF7 1281 aa7.19□□□□□ -1.26
PNKP-229ENST00000637897 ADAM29Q9UKF5 820 aa7.19□□□□□ -1.26
PNKP-229ENST00000637897 PRPF19Q9UMS4 504 aaKnown RBP7.19□□□□□ -1.26
PNKP-229ENST00000637897 FIS1Q9Y3D6 152 aa7.19□□□□□ -1.26
PNKP-229ENST00000637897 ANGPTL3Q9Y5C1 460 aa7.19□□□□□ -1.26
PNKP-229ENST00000637897 C2CD3Q4AC94 2353 aa7.19□□□□□ -1.26
PNKP-229ENST00000637897 ZFHX3Q15911 3703 aa7.18□□□□□ -1.26
PNKP-229ENST00000637897 A0A0G2JNJ9 132 aa7.18□□□□□ -1.26
PNKP-229ENST00000637897 LOC100653049A0A140TA62 436 aa7.18□□□□□ -1.26
PNKP-229ENST00000637897 ATP6AP2A0A1C7CYW4 349 aa7.18□□□□□ -1.26
PNKP-229ENST00000637897 MANBAO00462 879 aa7.18□□□□□ -1.26
PNKP-229ENST00000637897 AQP7O14520 342 aa7.18□□□□□ -1.26
PNKP-229ENST00000637897 PRRG2O14669 202 aa7.18□□□□□ -1.26
PNKP-229ENST00000637897 ATP6AP2O75787 350 aa7.18□□□□□ -1.26
PNKP-229ENST00000637897 KRT34O76011 436 aa7.18□□□□□ -1.26
PNKP-229ENST00000637897 OTCP00480 354 aa7.18□□□□□ -1.26
PNKP-229ENST00000637897 LBPP18428 481 aa7.18□□□□□ -1.26
PNKP-229ENST00000637897 PTGER4P35408 488 aa7.18□□□□□ -1.26
PNKP-229ENST00000637897 FEN1P39748 380 aaKnown RBP7.18□□□□□ -1.26
PNKP-229ENST00000637897 BUD31P41223 144 aaPredicted RBP7.18□□□□□ -1.26
PNKP-229ENST00000637897 EMDP50402 254 aa7.18□□□□□ -1.26
PNKP-229ENST00000637897 XKP51811 444 aa7.18□□□□□ -1.26
PNKP-229ENST00000637897 PLIN5Q00G26 463 aa7.18□□□□□ -1.26
PNKP-229ENST00000637897 HMGCS1Q01581 520 aa7.18□□□□□ -1.26
PNKP-229ENST00000637897 MAP4K2Q12851 820 aa7.18□□□□□ -1.26
PNKP-229ENST00000637897 EXOSC7Q15024 291 aaKnown RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms