RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 PKP2Q99959 881 aa10.95□□□□□ -0.66
CLN6-223ENST00000637823 TREX2Q9BQ50 279 aaPredicted RBP10.95□□□□□ -0.66
CLN6-223ENST00000637823 CHID1Q9BWS9 393 aa10.95□□□□□ -0.66
CLN6-223ENST00000637823 BTBD2Q9BX70 525 aa10.95□□□□□ -0.66
CLN6-223ENST00000637823 SPRY4Q9C004 299 aa10.95□□□□□ -0.66
CLN6-223ENST00000637823 MTHFD2LQ9H903 347 aaPredicted RBP10.95□□□□□ -0.66
CLN6-223ENST00000637823 C3orf18Q9UK00 162 aa10.95□□□□□ -0.66
CLN6-223ENST00000637823 SATB2Q9UPW6 733 aa10.95□□□□□ -0.66
CLN6-223ENST00000637823 CFL2Q9Y281 166 aa10.95□□□□□ -0.66
CLN6-223ENST00000637823 V9GYQ6 96 aa10.95□□□□□ -0.66
CLN6-223ENST00000637823 FAM186AA6NE01 2351 aa10.95□□□□□ -0.66
CLN6-223ENST00000637823 PMS2P1A4D2B8 440 aa10.94□□□□□ -0.66
CLN6-223ENST00000637823 A8MVJ9 347 aa10.94□□□□□ -0.66
CLN6-223ENST00000637823 C9orf172C9J069 976 aa10.94□□□□□ -0.66
CLN6-223ENST00000637823 PCDH17O14917 1159 aa10.94□□□□□ -0.66
CLN6-223ENST00000637823 BRINP1O60477 761 aa10.94□□□□□ -0.66
CLN6-223ENST00000637823 NME6O75414 186 aaPredicted RBP10.94□□□□□ -0.66
CLN6-223ENST00000637823 TIPRLO75663 272 aa10.94□□□□□ -0.66
CLN6-223ENST00000637823 MFN2O95140 757 aa10.94□□□□□ -0.66
CLN6-223ENST00000637823 H6PDO95479 791 aa10.94□□□□□ -0.66
CLN6-223ENST00000637823 DLGAP3O95886 979 aa10.94□□□□□ -0.66
CLN6-223ENST00000637823 CLPSP04118 112 aa10.94□□□□□ -0.66
CLN6-223ENST00000637823 IGKV3-11P04433 115 aa10.94□□□□□ -0.66
CLN6-223ENST00000637823 CHRM4P08173 479 aa10.94□□□□□ -0.66
CLN6-223ENST00000637823 GUSBP08236 651 aa10.94□□□□□ -0.66
CLN6-223ENST00000637823 FASP25445 335 aa10.94□□□□□ -0.66
CLN6-223ENST00000637823 CRYBA2P53672 197 aa10.94□□□□□ -0.66
CLN6-223ENST00000637823 SLC37A1P57057 533 aa10.94□□□□□ -0.66
CLN6-223ENST00000637823 SESN3P58005 492 aa10.94□□□□□ -0.66
CLN6-223ENST00000637823 POU6F2P78424 691 aaPredicted RBP10.94□□□□□ -0.66
CLN6-223ENST00000637823 NHLH1Q02575 133 aa10.94□□□□□ -0.66
CLN6-223ENST00000637823 FUT5Q11128 374 aa10.94□□□□□ -0.66
CLN6-223ENST00000637823 TARDBPQ13148 414 aaKnown RBP eCLIP10.94□□□□□ -0.66
CLN6-223ENST00000637823 SFT2D3Q587I9 215 aa10.94□□□□□ -0.66
CLN6-223ENST00000637823 RPS26P11Q5JNZ5 115 aaPredicted RBP10.94□□□□□ -0.66
CLN6-223ENST00000637823 FAAH2Q6GMR7 532 aa10.94□□□□□ -0.66
CLN6-223ENST00000637823 TMEM205Q6UW68 189 aa10.94□□□□□ -0.66
CLN6-223ENST00000637823 FAM198BQ6UWH4 519 aa10.94□□□□□ -0.66
CLN6-223ENST00000637823 LANCL3Q6ZV70 420 aa10.94□□□□□ -0.66
CLN6-223ENST00000637823 FKBP9P1Q75LS8 142 aa10.94□□□□□ -0.66
CLN6-223ENST00000637823 ERMP1Q7Z2K6 904 aa10.94□□□□□ -0.66
CLN6-223ENST00000637823 ARMC8Q8IUR7 673 aa10.94□□□□□ -0.66
CLN6-223ENST00000637823 LILRA2Q8N149 483 aa10.94□□□□□ -0.66
CLN6-223ENST00000637823 COX18Q8N8Q8 333 aa10.94□□□□□ -0.66
CLN6-223ENST00000637823 C16orf52Q8NHV5 167 aa10.94□□□□□ -0.66
CLN6-223ENST00000637823 ZNF721Q8TF20 911 aa10.94□□□□□ -0.66
CLN6-223ENST00000637823 LRTOMTQ8WZ04 291 aa10.94□□□□□ -0.66
CLN6-223ENST00000637823 TPD52L3Q96J77 140 aa10.94□□□□□ -0.66
CLN6-223ENST00000637823 VSTM2LQ96N03 204 aa10.94□□□□□ -0.66
CLN6-223ENST00000637823 SDF2Q99470 211 aa10.94□□□□□ -0.66
CLN6-223ENST00000637823 CRB3Q9BUF7 120 aa10.94□□□□□ -0.66
CLN6-223ENST00000637823 POLE3Q9NRF9 147 aa10.94□□□□□ -0.66
CLN6-223ENST00000637823 C19orf25Q9UFG5 118 aaPredicted RBP10.94□□□□□ -0.66
CLN6-223ENST00000637823 RIMS3Q9UJD0 308 aa10.94□□□□□ -0.66
CLN6-223ENST00000637823 GPC6Q9Y625 555 aaPredicted RBP10.94□□□□□ -0.66
CLN6-223ENST00000637823 TEX51A0A1B0GUA7 166 aa10.93□□□□□ -0.66
CLN6-223ENST00000637823 OR6C76A6NM76 312 aa10.93□□□□□ -0.66
CLN6-223ENST00000637823 TMEM229AB2RXF0 380 aa10.93□□□□□ -0.66
CLN6-223ENST00000637823 SLC30A4O14863 429 aa10.93□□□□□ -0.66
CLN6-223ENST00000637823 CASQ2O14958 399 aaPredicted RBP10.93□□□□□ -0.66
CLN6-223ENST00000637823 CLOCKO15516 846 aa10.93□□□□□ -0.66
CLN6-223ENST00000637823 STX11O75558 287 aa10.93□□□□□ -0.66
CLN6-223ENST00000637823 IGHEP01854 428 aa10.93□□□□□ -0.66
CLN6-223ENST00000637823 SEMG1P04279 462 aa10.93□□□□□ -0.66
CLN6-223ENST00000637823 RAB40ALP0C0E4 278 aa10.93□□□□□ -0.66
CLN6-223ENST00000637823 PPICP45877 212 aa10.93□□□□□ -0.66
CLN6-223ENST00000637823 PTDSS1P48651 473 aaKnown RBP10.93□□□□□ -0.66
CLN6-223ENST00000637823 KCNJ10P78508 379 aa10.93□□□□□ -0.66
CLN6-223ENST00000637823 HPCAP84074 193 aa10.93□□□□□ -0.66
CLN6-223ENST00000637823 PSG6Q00889 435 aa10.93□□□□□ -0.66
CLN6-223ENST00000637823 NCF4Q15080 339 aa10.93□□□□□ -0.66
CLN6-223ENST00000637823 ATP6AP1Q15904 470 aa10.93□□□□□ -0.66
CLN6-223ENST00000637823 C3orf38Q5JPI3 329 aa10.93□□□□□ -0.66
CLN6-223ENST00000637823 DCST2Q5T1A1 773 aa10.93□□□□□ -0.66
CLN6-223ENST00000637823 PIWIL3Q7Z3Z3 882 aaKnown RBP10.93□□□□□ -0.66
CLN6-223ENST00000637823 CPEB2Q7Z5Q1 589 aaKnown RBP10.93□□□□□ -0.66
CLN6-223ENST00000637823 ZDHHC21Q8IVQ6 265 aa10.93□□□□□ -0.66
CLN6-223ENST00000637823 TMEM102Q8N9M5 508 aaPredicted RBP10.93□□□□□ -0.66
CLN6-223ENST00000637823 OR10Q1Q8NGQ4 319 aa10.93□□□□□ -0.66
CLN6-223ENST00000637823 OR1N1Q8NGS0 311 aa10.93□□□□□ -0.66
CLN6-223ENST00000637823 FAM110BQ8TC76 370 aa10.93□□□□□ -0.66
CLN6-223ENST00000637823 CENPNQ96H22 339 aaPredicted RBP10.93□□□□□ -0.66
CLN6-223ENST00000637823 HSH2DQ96JZ2 352 aa10.93□□□□□ -0.66
CLN6-223ENST00000637823 COL21A1Q96P44 957 aa10.93□□□□□ -0.66
CLN6-223ENST00000637823 BTBD9Q96Q07 612 aa10.93□□□□□ -0.66
CLN6-223ENST00000637823 NUDT9Q9BW91 350 aa10.93□□□□□ -0.66
CLN6-223ENST00000637823 OR8D2Q9GZM6 311 aa10.93□□□□□ -0.66
CLN6-223ENST00000637823 SAP130Q9H0E3 1048 aa10.93□□□□□ -0.66
CLN6-223ENST00000637823 SLC38A1Q9H2H9 487 aa10.93□□□□□ -0.66
CLN6-223ENST00000637823 RUBCNLQ9H714 662 aa10.93□□□□□ -0.66
CLN6-223ENST00000637823 TRIM45Q9H8W5 580 aaPredicted RBP10.93□□□□□ -0.66
CLN6-223ENST00000637823 IL1RAPQ9NPH3 570 aa10.93□□□□□ -0.66
CLN6-223ENST00000637823 AGPAT4Q9NRZ5 378 aa10.93□□□□□ -0.66
CLN6-223ENST00000637823 COPS7AQ9UBW8 275 aa10.93□□□□□ -0.66
CLN6-223ENST00000637823 SEC14L3Q9UDX4 400 aa10.93□□□□□ -0.66
CLN6-223ENST00000637823 BAG5Q9UL15 447 aa10.93□□□□□ -0.66
CLN6-223ENST00000637823 PPIEQ9UNP9 301 aaKnown RBP10.93□□□□□ -0.66
CLN6-223ENST00000637823 GPR55Q9Y2T6 319 aaPredicted RBP10.93□□□□□ -0.66
CLN6-223ENST00000637823 DSPPQ9NZW4 1301 aa10.92□□□□□ -0.66
CLN6-223ENST00000637823 LOC102723996A0A087X1L8 192 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms