RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 RPP38P78345 283 aaKnown RBP6.23□□□□□ -1.41
UPF3B-205ENST00000636792 PHC1P78364 1004 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 PLAURQ03405 335 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 RBBP4Q09028 425 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 MGAT2Q10469 447 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 ATP1A4Q13733 1029 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 NFYCQ13952 458 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 ZNF267Q14586 743 aaPredicted RBP6.23□□□□□ -1.41
UPF3B-205ENST00000636792 LTB4RQ15722 352 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 SPDYE7PQ495Y7 208 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 CRB2Q5IJ48 1285 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 EXOSC6Q5RKV6 272 aaKnown RBP6.23□□□□□ -1.41
UPF3B-205ENST00000636792 HLA-DQA1Q5Y7H0 255 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 AP1ARQ63HQ0 302 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 REP15Q6BDI9 236 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 ANKRD26P1Q6NSI1 321 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 TMEM81Q6P7N7 255 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 TMEM107Q6UX40 140 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 C16orf89Q6UX73 402 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 GK5Q6ZS86 529 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 SHISA6Q6ZSJ9 500 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 ZNF551Q7Z340 670 aaPredicted RBP6.23□□□□□ -1.41
UPF3B-205ENST00000636792 YTHDF3Q7Z739 585 aaKnown RBP6.23□□□□□ -1.41
UPF3B-205ENST00000636792 SERPINA11Q86U17 422 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 VASH2Q86V25 355 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 OR4N5Q8IXE1 308 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 PGAM4Q8N0Y7 254 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 TAGAPQ8N103 731 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 ZNF441Q8N8Z8 693 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 NUP43Q8NFH3 380 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 OR7G2Q8NG99 324 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 OR52N2Q8NGI0 321 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 SLC22A8Q8TCC7 542 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 ZFP90Q8TF47 636 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 APOBEC4Q8WW27 367 aaKnown RBP6.23□□□□□ -1.41
UPF3B-205ENST00000636792 TM9SF4Q92544 642 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 NCLNQ969V3 563 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 CIDECQ96AQ7 238 aaPredicted RBP6.23□□□□□ -1.41
UPF3B-205ENST00000636792 VPS33AQ96AX1 596 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 DTNBP1Q96EV8 351 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 SLC35G5Q96KT7 338 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 ZNF354BQ96LW1 612 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 VSTM2LQ96N03 204 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 ANKRD27Q96NW4 1050 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 SECISBP2Q96T21 854 aaKnown RBP6.23□□□□□ -1.41
UPF3B-205ENST00000636792 CGREF1Q99674 301 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 SLC35A5Q9BS91 424 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 CNPPD1Q9BV87 410 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 ACTRT3Q9BYD9 372 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 DEFB126Q9BYW3 111 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 OR8D2Q9GZM6 311 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 WWTR1Q9GZV5 400 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 PAIP1Q9H074 479 aaKnown RBP6.23□□□□□ -1.41
UPF3B-205ENST00000636792 ADNPQ9H2P0 1102 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 PIGUQ9H490 435 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 ALG2Q9H553 416 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 CXorf36Q9H7Y0 433 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 EVA1AQ9H8M9 152 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 SPAG4Q9NPE6 437 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 EXD2Q9NVH0 621 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 CALML5Q9NZT1 146 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 ARMCX1Q9P291 453 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 FAF1Q9UNN5 650 aaPredicted RBP6.23□□□□□ -1.41
UPF3B-205ENST00000636792 LIPT1Q9Y234 373 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 HEMK1Q9Y5R4 338 aaPredicted RBP6.23□□□□□ -1.41
UPF3B-205ENST00000636792 SPEGQ15772 3267 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 C2orf92A0A1B0GVN3 265 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 TMEM247A6NEH6 219 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 CCT8L1PA6NM43 557 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 FXYD1O00168 92 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 CLIC1O00299 241 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 EBAG9O00559 213 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 FBP2O00757 339 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 SEC24DO94855 1032 aaPredicted RBP6.22□□□□□ -1.41
UPF3B-205ENST00000636792 NKX2-2O95096 273 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 UNC5CO95185 931 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 HMGN2P05204 90 aaKnown RBP6.22□□□□□ -1.41
UPF3B-205ENST00000636792 ALOX5P09917 674 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 CT62P0C5K7 136 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 SFTPCP11686 197 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 PTPN6P29350 595 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 TRHRP34981 398 aaPredicted RBP6.22□□□□□ -1.41
UPF3B-205ENST00000636792 SOX18P35713 384 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 KRT20P35900 424 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 CASRP41180 1078 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 EMDP50402 254 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 NUDT2P50583 147 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 NME5P56597 212 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 CBX1P83916 185 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 RHDQ02161 417 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 ID2Q02363 134 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 EEF1A2Q05639 463 aaKnown RBP6.22□□□□□ -1.41
UPF3B-205ENST00000636792 DUSP2Q05923 314 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 ZNF155Q12901 538 aaPredicted RBP6.22□□□□□ -1.41
UPF3B-205ENST00000636792 GAB1Q13480 694 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 EFR3AQ14156 821 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 MEP1AQ16819 746 aa6.22□□□□□ -1.41
UPF3B-205ENST00000636792 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.22□□□□□ -1.41
UPF3B-205ENST00000636792 PRSS53Q2L4Q9 553 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms