RNA–Protein interactions for RNA: ENST00000636012.1

CACNA1A-221, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-221ENST00000636012 FOLR3P41439 243 aa15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 ZNF81P51508 661 aa15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 DVL1P1P54792 670 aaPredicted RBP15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 TUBA1BP68363 451 aa15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 TUBA4AP68366 448 aa15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 TUBA1AQ71U36 451 aa15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 C6orf120Q7Z4R8 191 aa15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 LMF1Q96S06 567 aa15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 GINS3Q9BRX5 216 aa15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 NXF5Q9H1B4 397 aaKnown RBP15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 PTGDR2Q9Y5Y4 395 aa15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 A6NHS1 94 aa15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 TTLL8A6PVC2 850 aa15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 F5H5K5 113 aa15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 RGS9O75916 674 aaPredicted RBP15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 MAGEB1P43366 347 aa15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 ZBED5Q49AG3 693 aa15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 PRAMEF8Q5VWM4 474 aa15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 PRAMEF7Q5VXH5 474 aa15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 CHPT1Q8WUD6 406 aa15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 ZNF689Q96CS4 500 aaPredicted RBP15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 TSNAXQ99598 290 aaKnown RBP15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 SLC17A9Q9BYT1 436 aa15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 UBR2Q8IWV8 1755 aa15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 DUOX1Q9NRD9 1551 aa15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 ARHGEF17Q96PE2 2063 aaPredicted RBP15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 ADRB3P13945 408 aa15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 IL1RNP18510 177 aa15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 HYAL4Q2M3T9 481 aa15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 SLC39A5Q6ZMH5 540 aa15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 SMIM15Q7Z3B0 74 aa15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 UEVLDQ8IX04 471 aa15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 ACBD4Q8NC06 268 aa15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 OR51T1Q8NGJ9 327 aa15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 PPA2Q9H2U2 334 aa15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 DNAJB11Q9UBS4 358 aa15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 SEC14L4Q9UDX3 406 aa15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 ADGRB1O14514 1584 aa15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 RAB5BP61020 215 aa15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 NR0B2Q15466 257 aa15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 TMEM236Q5W0B7 351 aa15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 PIGWQ7Z7B1 504 aa15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 LMAN1LQ9HAT1 526 aa15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 CAMK2AQ9UQM7 478 aa15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 LRRC42Q9Y546 428 aa15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 ZNF888P0CJ79 500 aaPredicted RBP15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 DEFB133Q30KQ1 61 aa15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 SGTBQ96EQ0 304 aa15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 GJD2Q9UKL4 321 aa15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 C1orf226A1L170 272 aa15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 APBB3O95704 486 aa15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 GSRP00390 522 aa15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 LCATP04180 440 aa15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 ACTA2P62736 377 aa15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 ACTG2P63267 376 aa15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 NANOGP8Q6NSW7 305 aa15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 ZNF783Q6ZMS7 281 aa15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 NANOGQ9H9S0 305 aa15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 SLC7A8Q9UHI5 535 aa15.2■□□□□ 0.02
CACNA1A-221ENST00000636012 H3BQ06 376 aaPredicted RBP15.19■□□□□ 0.02
CACNA1A-221ENST00000636012 TERTO14746 1132 aaKnown RBP15.19■□□□□ 0.02
CACNA1A-221ENST00000636012 SLC19A2O60779 497 aa15.19■□□□□ 0.02
CACNA1A-221ENST00000636012 SOX3P41225 446 aa15.19■□□□□ 0.02
CACNA1A-221ENST00000636012 ZNF610Q8N9Z0 462 aa15.19■□□□□ 0.02
CACNA1A-221ENST00000636012 ZNF439Q8NDP4 499 aa15.19■□□□□ 0.02
CACNA1A-221ENST00000636012 C1orf74Q96LT6 269 aa15.19■□□□□ 0.02
CACNA1A-221ENST00000636012 MGAT4CQ9UBM8 478 aa15.19■□□□□ 0.02
CACNA1A-221ENST00000636012 TGM5O43548 720 aa15.19■□□□□ 0.02
CACNA1A-221ENST00000636012 GMDSO60547 372 aa15.19■□□□□ 0.02
CACNA1A-221ENST00000636012 LPLP06858 475 aa15.19■□□□□ 0.02
CACNA1A-221ENST00000636012 GCH1P30793 250 aa15.19■□□□□ 0.02
CACNA1A-221ENST00000636012 MAP2K4P45985 399 aa15.19■□□□□ 0.02
CACNA1A-221ENST00000636012 COL9A3Q14050 684 aaPredicted RBP15.19■□□□□ 0.02
CACNA1A-221ENST00000636012 MELKQ14680 651 aa15.19■□□□□ 0.02
CACNA1A-221ENST00000636012 COL28A1Q2UY09 1125 aa15.19■□□□□ 0.02
CACNA1A-221ENST00000636012 CNIH3Q8TBE1 160 aa15.19■□□□□ 0.02
CACNA1A-221ENST00000636012 C16orf78Q8WTQ4 265 aa15.19■□□□□ 0.02
CACNA1A-221ENST00000636012 NPRL2Q8WTW4 380 aa15.19■□□□□ 0.02
CACNA1A-221ENST00000636012 IGSF8Q969P0 613 aa15.19■□□□□ 0.02
CACNA1A-221ENST00000636012 DOHHQ9BU89 302 aa15.19■□□□□ 0.02
CACNA1A-221ENST00000636012 KCMF1Q9P0J7 381 aa15.19■□□□□ 0.02
CACNA1A-221ENST00000636012 GRB2P62993 217 aaKnown RBP15.19■□□□□ 0.02
CACNA1A-221ENST00000636012 FIGLAQ6QHK4 219 aa15.19■□□□□ 0.02
CACNA1A-221ENST00000636012 NXPE4Q6UWF7 544 aa15.19■□□□□ 0.02
CACNA1A-221ENST00000636012 GPR62Q9BZJ7 368 aa15.19■□□□□ 0.02
CACNA1A-221ENST00000636012 HSPB11Q9Y547 144 aa15.19■□□□□ 0.02
CACNA1A-221ENST00000636012 FAM171A2A8MVW0 826 aa15.19■□□□□ 0.02
CACNA1A-221ENST00000636012 RTCAO00442 366 aaKnown RBP15.19■□□□□ 0.02
CACNA1A-221ENST00000636012 BCAS2O75934 225 aaPredicted RBP15.19■□□□□ 0.02
CACNA1A-221ENST00000636012 TIA1P31483 386 aaKnown RBP eCLIP15.19■□□□□ 0.02
CACNA1A-221ENST00000636012 GCGRP47871 477 aa15.19■□□□□ 0.02
CACNA1A-221ENST00000636012 HK3P52790 923 aa15.19■□□□□ 0.02
CACNA1A-221ENST00000636012 CTXN1P60606 82 aa15.19■□□□□ 0.02
CACNA1A-221ENST00000636012 ERVK-16P61578 105 aa15.19■□□□□ 0.02
CACNA1A-221ENST00000636012 PPP2CAP67775 309 aa15.19■□□□□ 0.02
CACNA1A-221ENST00000636012 FGL2Q14314 439 aa15.19■□□□□ 0.02
CACNA1A-221ENST00000636012 PIAS4Q8N2W9 510 aaPredicted RBP15.19■□□□□ 0.02
CACNA1A-221ENST00000636012 FBXL8Q96CD0 374 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms