RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 ASTN1O14525 1302 aa0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 CLSPNQ9HAW4 1339 aa0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 SALL1Q9NSC2 1324 aa0.87□□□□□ -2.27
SMARCB1-209ENST00000635578 BAHCC1Q9P281 2608 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 FREM3P0C091 2139 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 DOCK10Q96BY6 2186 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 PTPRZ1P23471 2315 aaPredicted RBP0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 IGF2RP11717 2491 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 TRAV9-2A0A087WT02 112 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 A0A087WV48 116 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 A0A087WWV3 80 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 IGHV3-20A0A0C4DH32 117 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 C13orf42A0A1B0GVH6 325 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 ZNF840PA6NDX5 716 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 TRABD2BA6NFA1 517 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 OOEPA6NGQ2 149 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 SHISA7A6NL88 538 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 CCT8L1PA6NM43 557 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 EFCAB7A8K855 629 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 ZNF487B1APH4 448 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 EPM2AB3EWF7 344 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 CCDC188H7C350 402 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 SLC33A1O00400 549 aaPredicted RBP0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 PHOX2AO14813 284 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 MCF2LO15068 1137 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 TTI1O43156 1089 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 TXNL1O43396 289 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 SYT7O43581 403 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 KIAA0513O60268 411 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 CNMDO75829 334 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 GLCEO94923 617 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 OR6A2O95222 327 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 PGK1P00558 417 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 THY1P04216 161 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 PCCAP05165 728 aaPredicted RBP0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 PGK2P07205 417 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 CHRNGP07510 517 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 NUDT17P0C025 328 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 SUPT20HL2P0C7V6 817 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 FAM200BP0CF97 657 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 TPBGLP0DKB5 382 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 MBL2P11226 248 aaPredicted RBP0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 CD59P13987 128 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 FOLR2P14207 255 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 ANPEPP15144 967 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 SELEP16581 610 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 IFNAR1P17181 557 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 STIP1P31948 543 aaKnown RBP0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 NF2P35240 595 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 OR3A1P47881 315 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 CRYBA2P53672 197 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 VCPP55072 806 aaKnown RBP0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 NME5P56597 212 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 RPS8P62241 208 aaKnown RBP0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 DEFB103AP81534 67 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 BEX3Q00994 111 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 GALK2Q01415 458 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 BFSP1Q12934 665 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 EIF4EBP2Q13542 120 aaPredicted RBP0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 GIT2Q14161 759 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 BTG3Q14201 252 aaPredicted RBP0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 NFE2L1Q14494 772 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 RFTN1Q14699 578 aaPredicted RBP0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 SLC10A1Q14973 349 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 SHHQ15465 462 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 SPHARQ15513 63 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 CCDC152Q4G0S7 254 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 ANKRD20A4Q4UJ75 823 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 PARP10Q53GL7 1025 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 ANKRD20A8PQ5CZ79 823 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 ZNF506Q5JVG8 444 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 TCHHL1Q5QJ38 904 aaPredicted RBP0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 ANKRD20A2Q5SQ80 823 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 C9orf66Q5T8R8 295 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 ANKRD20A1Q5TYW2 823 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 ANKRD20A3Q5VUR7 823 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 ZNF776Q68DI1 518 aaPredicted RBP0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 REP15Q6BDI9 236 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 RTL6Q6ICC9 239 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 KLHL10Q6JEL2 608 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 CAPN13Q6MZZ7 669 aaPredicted RBP0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 NEPROQ6NW34 567 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 CDC42EP5Q6NZY7 148 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 ABRAXAS1Q6UWZ7 409 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 APOOLQ6UXV4 268 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 GBP6Q6ZN66 633 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 PPP1R42Q7Z4L9 355 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 CCDC91Q7Z6B0 441 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 NLRP14Q86W24 1093 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 TMEM126BQ8IUX1 230 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 LRRC49Q8IUZ0 686 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 FBXO16Q8IX29 292 aaPredicted RBP0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 TMEM99Q8N816 258 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 ZNF781Q8N8C0 355 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 CLEC1AQ8NC01 280 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 RELL2Q8NC24 303 aaPredicted RBP0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 TRPV3Q8NET8 790 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 OR1B1Q8NGR6 318 aa0.86□□□□□ -2.27
SMARCB1-209ENST00000635578 OR6F1Q8NGZ6 308 aa0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms