RNA–Protein interactions for RNA: ENST00000627253.1

SNORD3E-202, Transcript of small nucleolar RNA, C/D box 3E, humanhuman

BASIC

Gene SNORD3E, Length 216 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3E-202ENST00000627253 ZBED6CLQ96FA7 236 aaPredicted RBP1.17□□□□□ -2.22
SNORD3E-202ENST00000627253 PIWIL1Q96J94 861 aaKnown RBP1.17□□□□□ -2.22
SNORD3E-202ENST00000627253 APOOQ9BUR5 198 aa1.17□□□□□ -2.22
SNORD3E-202ENST00000627253 RAB17Q9H0T7 212 aa1.17□□□□□ -2.22
SNORD3E-202ENST00000627253 PNNQ9H307 717 aaKnown RBP1.17□□□□□ -2.22
SNORD3E-202ENST00000627253 TMEM231Q9H6L2 316 aa1.17□□□□□ -2.22
SNORD3E-202ENST00000627253 ECT2Q9H8V3 914 aa1.17□□□□□ -2.22
SNORD3E-202ENST00000627253 POLD4Q9HCU8 107 aa1.17□□□□□ -2.22
SNORD3E-202ENST00000627253 ESM1Q9NQ30 184 aa1.17□□□□□ -2.22
SNORD3E-202ENST00000627253 EXOSC3Q9NQT5 275 aaKnown RBP1.17□□□□□ -2.22
SNORD3E-202ENST00000627253 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP1.17□□□□□ -2.22
SNORD3E-202ENST00000627253 FAM114A2Q9NRY5 505 aa1.17□□□□□ -2.22
SNORD3E-202ENST00000627253 CUTCQ9NTM9 273 aa1.17□□□□□ -2.22
SNORD3E-202ENST00000627253 GPR83Q9NYM4 423 aa1.17□□□□□ -2.22
SNORD3E-202ENST00000627253 KLRF1Q9NZS2 232 aa1.17□□□□□ -2.22
SNORD3E-202ENST00000627253 ODF2LQ9ULJ1 636 aa1.17□□□□□ -2.22
SNORD3E-202ENST00000627253 PLA2G4CQ9UP65 541 aa1.17□□□□□ -2.22
SNORD3E-202ENST00000627253 EIF3LQ9Y262 564 aaKnown RBP1.17□□□□□ -2.22
SNORD3E-202ENST00000627253 NTNG1Q9Y2I2 539 aa1.17□□□□□ -2.22
SNORD3E-202ENST00000627253 RNF115Q9Y4L5 304 aa1.17□□□□□ -2.22
SNORD3E-202ENST00000627253 SMAD5-AS1Q9Y6J3 95 aa1.17□□□□□ -2.22
SNORD3E-202ENST00000627253 CUX2O14529 1486 aa1.17□□□□□ -2.22
SNORD3E-202ENST00000627253 GRIN2DO15399 1336 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 TRAV9-2A0A087WT02 112 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 A0A0J9YVX5 310 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 A0A1W2PQ72 361 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 TTC26A0AVF1 554 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 TRABD2BA6NFA1 517 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 ZSCAN5CA6NGD5 496 aaPredicted RBP1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 ERI2A8K979 691 aaKnown RBP1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 C11orf98E9PRG8 122 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 F8WDY8 70 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 K7ERI5 159 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 LGALS8O00214 317 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 SLC17A2O00624 439 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 IMPA2O14732 288 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 ADAM12O43184 909 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 PHF1O43189 567 aaPredicted RBP1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 LCMT2O60294 686 aaKnown RBP1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 ZNF253O75346 499 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 TRIM16O95361 564 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 WNT2P09544 360 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 RRASP10301 218 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 DPP4P27487 766 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 PRDX6P30041 224 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 AXLP30530 894 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 RABIFP47224 123 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 OR1D4P47884 311 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 ALDH3B2P48448 385 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 FNTAP49354 379 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 CSRP3P50461 194 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 SLC26A5P58743 744 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 BPIFB3P59826 476 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 NOP14P78316 857 aaKnown RBP1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 SRYQ05066 204 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 SPP2Q13103 211 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 RUNX3Q13761 415 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 BTG3Q14201 252 aaPredicted RBP1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 TGIF1Q15583 401 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 ZKSCAN8Q15776 578 aaPredicted RBP1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 CDKN3Q16667 212 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 TIMM50Q3ZCQ8 353 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 TTC31Q49AM3 519 aaPredicted RBP1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 DCST2Q5T1A1 773 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 LCE3EQ5T5B0 92 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 LGSNQ5TDP6 509 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 METTL11BQ5VVY1 283 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 RSBN1Q5VWQ0 802 aaPredicted RBP1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 RAET1GQ6H3X3 334 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 IRGCQ6NXR0 463 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 BTNL3Q6UXE8 466 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 PAMR1Q6UXH9 720 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 VITQ6UXI7 678 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 C2orf66Q6UXQ4 117 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 HACD2Q6Y1H2 254 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 ADAMTSL5Q6ZMM2 481 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 GCNT7Q6ZNI0 430 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 TMEM26Q6ZUK4 368 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 P4HA3Q7Z4N8 544 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 TSEN54Q7Z6J9 526 aaKnown RBP1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 GPD1LQ8N335 351 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 CERS5Q8N5B7 392 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 GPATCH11Q8N954 259 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 ANKRD20A12PQ8NF67 263 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 OR4F17Q8NGA8 305 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 OR52J3Q8NH60 311 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 TYMSOSQ8TAI1 123 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 ADIPOR1Q96A54 375 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 DNAJA3Q96EY1 480 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 OR4F4Q96R69 305 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 MCCC1Q96RQ3 725 aaPredicted RBP1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 RANBP9Q96S59 729 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 GPA33Q99795 319 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 FEM1AQ9BSK4 669 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 PAXXQ9BUH6 204 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 FICDQ9BVA6 458 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 CARD6Q9BX69 1037 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 HCAR1Q9BXC0 346 aa1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 OPN3Q9H1Y3 402 aaPredicted RBP1.16□□□□□ -2.22
SNORD3E-202ENST00000627253 ROPN1Q9HAT0 212 aaPredicted RBP1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms