RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 AIG1Q9NVV5 245 aa12.88□□□□□ -0.35
SNRPA1-216ENST00000626000 FAM120CQ9NX05 1096 aaKnown RBP12.88□□□□□ -0.35
SNRPA1-216ENST00000626000 GIN1Q9NXP7 522 aa12.88□□□□□ -0.35
SNRPA1-216ENST00000626000 CNOT11Q9UKZ1 510 aaKnown RBP12.88□□□□□ -0.35
SNRPA1-216ENST00000626000 POLEQ07864 2286 aa12.87□□□□□ -0.35
SNRPA1-216ENST00000626000 EXPH5Q8NEV8 1989 aa12.87□□□□□ -0.35
SNRPA1-216ENST00000626000 SVILO95425 2214 aa12.87□□□□□ -0.35
SNRPA1-216ENST00000626000 E9PBE3 544 aa12.87□□□□□ -0.35
SNRPA1-216ENST00000626000 NPIPA5E9PKD4 350 aa12.87□□□□□ -0.35
SNRPA1-216ENST00000626000 POLR3GO15318 223 aaPredicted RBP12.87□□□□□ -0.35
SNRPA1-216ENST00000626000 CFLARO15519 480 aa12.87□□□□□ -0.35
SNRPA1-216ENST00000626000 ZNF354AO60765 605 aaPredicted RBP12.87□□□□□ -0.35
SNRPA1-216ENST00000626000 REM1O75628 298 aa12.87□□□□□ -0.35
SNRPA1-216ENST00000626000 SASH3O75995 380 aa12.87□□□□□ -0.35
SNRPA1-216ENST00000626000 GLSO94925 669 aaPredicted RBP12.87□□□□□ -0.35
SNRPA1-216ENST00000626000 STSP08842 583 aa12.87□□□□□ -0.35
SNRPA1-216ENST00000626000 LAMP1P11279 417 aa12.87□□□□□ -0.35
SNRPA1-216ENST00000626000 EPHA3P29320 983 aa12.87□□□□□ -0.35
SNRPA1-216ENST00000626000 SOX18P35713 384 aa12.87□□□□□ -0.35
SNRPA1-216ENST00000626000 MASP1P48740 699 aa12.87□□□□□ -0.35
SNRPA1-216ENST00000626000 DIO3P55073 304 aa12.87□□□□□ -0.35
SNRPA1-216ENST00000626000 GPR85P60893 370 aa12.87□□□□□ -0.35
SNRPA1-216ENST00000626000 PPIAP62937 165 aaKnown RBP12.87□□□□□ -0.35
SNRPA1-216ENST00000626000 TXNL4AP83876 142 aaKnown RBP12.87□□□□□ -0.35
SNRPA1-216ENST00000626000 PSG6Q00889 435 aa12.87□□□□□ -0.35
SNRPA1-216ENST00000626000 PMP22Q01453 160 aa12.87□□□□□ -0.35
SNRPA1-216ENST00000626000 TP53BP2Q13625 1128 aa12.87□□□□□ -0.35
SNRPA1-216ENST00000626000 SPDYE7PQ495Y7 208 aa12.87□□□□□ -0.35
SNRPA1-216ENST00000626000 ZNF385BQ569K4 471 aa12.87□□□□□ -0.35
SNRPA1-216ENST00000626000 NXNQ6DKJ4 435 aa12.87□□□□□ -0.35
SNRPA1-216ENST00000626000 SZRD1Q7Z422 152 aa12.87□□□□□ -0.35
SNRPA1-216ENST00000626000 SIAH3Q8IW03 269 aa12.87□□□□□ -0.35
SNRPA1-216ENST00000626000 SLC44A2Q8IWA5 706 aaPredicted RBP12.87□□□□□ -0.35
SNRPA1-216ENST00000626000 NUP43Q8NFH3 380 aa12.87□□□□□ -0.35
SNRPA1-216ENST00000626000 CKAP2Q8WWK9 683 aa12.87□□□□□ -0.35
SNRPA1-216ENST00000626000 HOXB13Q92826 284 aaPredicted RBP12.87□□□□□ -0.35
SNRPA1-216ENST00000626000 TMEM41AQ96HV5 264 aa12.87□□□□□ -0.35
SNRPA1-216ENST00000626000 ANGPTL4Q9BY76 406 aa12.87□□□□□ -0.35
SNRPA1-216ENST00000626000 TTTY12Q9BZ98 90 aa12.87□□□□□ -0.35
SNRPA1-216ENST00000626000 ZCCHC3Q9NUD5 404 aaKnown RBP12.87□□□□□ -0.35
SNRPA1-216ENST00000626000 TMEM45AQ9NWC5 275 aa12.87□□□□□ -0.35
SNRPA1-216ENST00000626000 NPIPA1Q9UND3 350 aa12.87□□□□□ -0.35
SNRPA1-216ENST00000626000 ABCG2Q9UNQ0 655 aa12.87□□□□□ -0.35
SNRPA1-216ENST00000626000 SLC5A6Q9Y289 635 aa12.87□□□□□ -0.35
SNRPA1-216ENST00000626000 DTX4Q9Y2E6 619 aa12.87□□□□□ -0.35
SNRPA1-216ENST00000626000 USH1CQ9Y6N9 552 aa12.87□□□□□ -0.35
SNRPA1-216ENST00000626000 PRSS51A0A1B0GVH4 220 aa12.86□□□□□ -0.35
SNRPA1-216ENST00000626000 OR14I1A6ND48 311 aa12.86□□□□□ -0.35
SNRPA1-216ENST00000626000 DIAPH2O60879 1101 aa12.86□□□□□ -0.35
SNRPA1-216ENST00000626000 AGFG2O95081 481 aa12.86□□□□□ -0.35
SNRPA1-216ENST00000626000 AGR2O95994 175 aa12.86□□□□□ -0.35
SNRPA1-216ENST00000626000 MST1P26927 711 aa12.86□□□□□ -0.35
SNRPA1-216ENST00000626000 S100A3P33764 101 aa12.86□□□□□ -0.35
SNRPA1-216ENST00000626000 PTGER1P34995 402 aa12.86□□□□□ -0.35
SNRPA1-216ENST00000626000 GCKP35557 465 aa12.86□□□□□ -0.35
SNRPA1-216ENST00000626000 ANXA11P50995 505 aaKnown RBP12.86□□□□□ -0.35
SNRPA1-216ENST00000626000 FBXW4P57775 412 aa12.86□□□□□ -0.35
SNRPA1-216ENST00000626000 STX1BP61266 288 aa12.86□□□□□ -0.35
SNRPA1-216ENST00000626000 MRPL49Q13405 166 aaKnown RBP12.86□□□□□ -0.35
SNRPA1-216ENST00000626000 NNATQ16517 81 aa12.86□□□□□ -0.35
SNRPA1-216ENST00000626000 PGS1Q32NB8 556 aa12.86□□□□□ -0.35
SNRPA1-216ENST00000626000 PDCD4Q53EL6 469 aaKnown RBP12.86□□□□□ -0.35
SNRPA1-216ENST00000626000 C4orf17Q53FE4 359 aa12.86□□□□□ -0.35
SNRPA1-216ENST00000626000 MSANTD1Q6ZTZ1 278 aa12.86□□□□□ -0.35
SNRPA1-216ENST00000626000 KRTCAP2Q8N6L1 136 aa12.86□□□□□ -0.35
SNRPA1-216ENST00000626000 TRIML2Q8N7C3 387 aa12.86□□□□□ -0.35
SNRPA1-216ENST00000626000 PRR7Q8TB68 274 aa12.86□□□□□ -0.35
SNRPA1-216ENST00000626000 TMBIM1Q969X1 311 aa12.86□□□□□ -0.35
SNRPA1-216ENST00000626000 RILPQ96NA2 401 aa12.86□□□□□ -0.35
SNRPA1-216ENST00000626000 STACQ99469 402 aa12.86□□□□□ -0.35
SNRPA1-216ENST00000626000 G6PC3Q9BUM1 346 aa12.86□□□□□ -0.35
SNRPA1-216ENST00000626000 CCDC28BQ9BUN5 200 aa12.86□□□□□ -0.35
SNRPA1-216ENST00000626000 OSBPL11Q9BXB4 747 aa12.86□□□□□ -0.35
SNRPA1-216ENST00000626000 ZDHHC11Q9H8X9 412 aa12.86□□□□□ -0.35
SNRPA1-216ENST00000626000 TCF7L2Q9NQB0 619 aa12.86□□□□□ -0.35
SNRPA1-216ENST00000626000 SDHAF3Q9NRP4 125 aa12.86□□□□□ -0.35
SNRPA1-216ENST00000626000 DUSP22Q9NRW4 184 aa12.86□□□□□ -0.35
SNRPA1-216ENST00000626000 PLSCR2Q9NRY7 297 aa12.86□□□□□ -0.35
SNRPA1-216ENST00000626000 DEPPQ9NTK1 212 aa12.86□□□□□ -0.35
SNRPA1-216ENST00000626000 KLRF1Q9NZS2 232 aa12.86□□□□□ -0.35
SNRPA1-216ENST00000626000 ZIM2Q9NZV7 527 aa12.86□□□□□ -0.35
SNRPA1-216ENST00000626000 CBLCQ9ULV8 474 aa12.86□□□□□ -0.35
SNRPA1-216ENST00000626000 FAF1Q9UNN5 650 aaPredicted RBP12.86□□□□□ -0.35
SNRPA1-216ENST00000626000 SNX8Q9Y5X2 465 aa12.86□□□□□ -0.35
SNRPA1-216ENST00000626000 CLEC18AA5D8T8 446 aa12.85□□□□□ -0.35
SNRPA1-216ENST00000626000 PRAMEF25A6NGN4 478 aa12.85□□□□□ -0.35
SNRPA1-216ENST00000626000 DUXAA6NLW8 204 aa12.85□□□□□ -0.35
SNRPA1-216ENST00000626000 PRRG2O14669 202 aa12.85□□□□□ -0.35
SNRPA1-216ENST00000626000 ANKRD28O15084 1053 aa12.85□□□□□ -0.35
SNRPA1-216ENST00000626000 UBDO15205 165 aa12.85□□□□□ -0.35
SNRPA1-216ENST00000626000 SUSD5O60279 629 aa12.85□□□□□ -0.35
SNRPA1-216ENST00000626000 TSPAN2O60636 221 aa12.85□□□□□ -0.35
SNRPA1-216ENST00000626000 HCN1O60741 890 aa12.85□□□□□ -0.35
SNRPA1-216ENST00000626000 SLC19A2O60779 497 aa12.85□□□□□ -0.35
SNRPA1-216ENST00000626000 NKX2-2O95096 273 aa12.85□□□□□ -0.35
SNRPA1-216ENST00000626000 IGHG3P01860 377 aa12.85□□□□□ -0.35
SNRPA1-216ENST00000626000 IL6P05231 212 aa12.85□□□□□ -0.35
SNRPA1-216ENST00000626000 ALOX5P09917 674 aa12.85□□□□□ -0.35
SNRPA1-216ENST00000626000 ABOP16442 354 aa12.85□□□□□ -0.35
SNRPA1-216ENST00000626000 PIGAP37287 484 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms