RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 IGLV3-21P80748 117 aaPredicted RBP11.7□□□□□ -0.54
PNKP-217ENST00000625216 TNFRSF17Q02223 184 aa11.7□□□□□ -0.54
PNKP-217ENST00000625216 HEPACAMQ14CZ8 416 aa11.7□□□□□ -0.54
PNKP-217ENST00000625216 C6orf10Q5SRN2 563 aa11.7□□□□□ -0.54
PNKP-217ENST00000625216 LRIF1Q5T3J3 769 aa11.7□□□□□ -0.54
PNKP-217ENST00000625216 CPTPQ5TA50 214 aa11.7□□□□□ -0.54
PNKP-217ENST00000625216 NDUFAF5Q5TEU4 345 aa11.7□□□□□ -0.54
PNKP-217ENST00000625216 C1QL3Q5VWW1 255 aa11.7□□□□□ -0.54
PNKP-217ENST00000625216 C18orf63Q68DL7 685 aa11.7□□□□□ -0.54
PNKP-217ENST00000625216 BNC2Q6ZN30 1099 aaPredicted RBP11.7□□□□□ -0.54
PNKP-217ENST00000625216 FJX1Q86VR8 437 aa11.7□□□□□ -0.54
PNKP-217ENST00000625216 ULK2Q8IYT8 1036 aa11.7□□□□□ -0.54
PNKP-217ENST00000625216 CYP4Z2PQ8N1L4 340 aa11.7□□□□□ -0.54
PNKP-217ENST00000625216 MCUR1Q96AQ8 359 aa11.7□□□□□ -0.54
PNKP-217ENST00000625216 ANKRD9Q96BM1 317 aaPredicted RBP11.7□□□□□ -0.54
PNKP-217ENST00000625216 RBM18Q96H35 190 aaKnown RBP11.7□□□□□ -0.54
PNKP-217ENST00000625216 ZNF764Q96H86 408 aaPredicted RBP11.7□□□□□ -0.54
PNKP-217ENST00000625216 CCDC115Q96NT0 180 aa11.7□□□□□ -0.54
PNKP-217ENST00000625216 PELOQ9BRX2 385 aaKnown RBP11.7□□□□□ -0.54
PNKP-217ENST00000625216 TIMMDC1Q9NPL8 285 aa11.7□□□□□ -0.54
PNKP-217ENST00000625216 GID8Q9NWU2 228 aa11.7□□□□□ -0.54
PNKP-217ENST00000625216 SLC25A37Q9NYZ2 338 aa11.7□□□□□ -0.54
PNKP-217ENST00000625216 VAPAQ9P0L0 249 aa11.7□□□□□ -0.54
PNKP-217ENST00000625216 GMPR2Q9P2T1 348 aaKnown RBP11.7□□□□□ -0.54
PNKP-217ENST00000625216 PRPF19Q9UMS4 504 aaKnown RBP11.7□□□□□ -0.54
PNKP-217ENST00000625216 ERVK-11Q9UQG0 969 aa11.7□□□□□ -0.54
PNKP-217ENST00000625216 ZNF835Q9Y2P0 537 aa11.7□□□□□ -0.54
PNKP-217ENST00000625216 PCDHA9Q9Y5H5 950 aa11.7□□□□□ -0.54
PNKP-217ENST00000625216 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.7□□□□□ -0.54
PNKP-217ENST00000625216 SVILO95425 2214 aa11.7□□□□□ -0.54
PNKP-217ENST00000625216 TMEM200CA6NKL6 621 aa11.69□□□□□ -0.54
PNKP-217ENST00000625216 WASHC1A8K0Z3 465 aa11.69□□□□□ -0.54
PNKP-217ENST00000625216 NPIPA5E9PKD4 350 aa11.69□□□□□ -0.54
PNKP-217ENST00000625216 NME4O00746 187 aa11.69□□□□□ -0.54
PNKP-217ENST00000625216 PROM1O43490 865 aa11.69□□□□□ -0.54
PNKP-217ENST00000625216 ASNA1O43681 348 aa11.69□□□□□ -0.54
PNKP-217ENST00000625216 SLC19A2O60779 497 aa11.69□□□□□ -0.54
PNKP-217ENST00000625216 KCNH1O95259 989 aa11.69□□□□□ -0.54
PNKP-217ENST00000625216 NR2F6P10588 404 aa11.69□□□□□ -0.54
PNKP-217ENST00000625216 DRD2P14416 443 aa11.69□□□□□ -0.54
PNKP-217ENST00000625216 ZNF24P17028 368 aa11.69□□□□□ -0.54
PNKP-217ENST00000625216 SLC6A2P23975 617 aa11.69□□□□□ -0.54
PNKP-217ENST00000625216 STT3AP46977 705 aa11.69□□□□□ -0.54
PNKP-217ENST00000625216 SLC7A2P52569 658 aa11.69□□□□□ -0.54
PNKP-217ENST00000625216 CEACAM7Q14002 265 aa11.69□□□□□ -0.54
PNKP-217ENST00000625216 SELPLGQ14242 412 aa11.69□□□□□ -0.54
PNKP-217ENST00000625216 FAM180BQ6P0A1 224 aa11.69□□□□□ -0.54
PNKP-217ENST00000625216 PGM2L1Q6PCE3 622 aa11.69□□□□□ -0.54
PNKP-217ENST00000625216 Q6ZPB1 254 aaPredicted RBP11.69□□□□□ -0.54
PNKP-217ENST00000625216 SPPL2CQ8IUH8 684 aa11.69□□□□□ -0.54
PNKP-217ENST00000625216 SIAH3Q8IW03 269 aa11.69□□□□□ -0.54
PNKP-217ENST00000625216 SLC34A3Q8N130 599 aa11.69□□□□□ -0.54
PNKP-217ENST00000625216 GHDCQ8N2G8 530 aa11.69□□□□□ -0.54
PNKP-217ENST00000625216 FAM13CQ8NE31 585 aa11.69□□□□□ -0.54
PNKP-217ENST00000625216 SLC2A12Q8TD20 617 aa11.69□□□□□ -0.54
PNKP-217ENST00000625216 EXOSC8Q96B26 276 aaKnown RBP11.69□□□□□ -0.54
PNKP-217ENST00000625216 ITCHQ96J02 903 aa11.69□□□□□ -0.54
PNKP-217ENST00000625216 MAGED4Q96JG8 741 aa11.69□□□□□ -0.54
PNKP-217ENST00000625216 ART5Q96L15 291 aa11.69□□□□□ -0.54
PNKP-217ENST00000625216 DGAT2Q96PD7 388 aa11.69□□□□□ -0.54
PNKP-217ENST00000625216 RAB3IPQ96QF0 476 aaPredicted RBP11.69□□□□□ -0.54
PNKP-217ENST00000625216 CDRT15Q96T59 188 aa11.69□□□□□ -0.54
PNKP-217ENST00000625216 PRPF18Q99633 342 aaKnown RBP11.69□□□□□ -0.54
PNKP-217ENST00000625216 CGREF1Q99674 301 aa11.69□□□□□ -0.54
PNKP-217ENST00000625216 CPPED1Q9BRF8 314 aaPredicted RBP11.69□□□□□ -0.54
PNKP-217ENST00000625216 FAIM2Q9BWQ8 316 aa11.69□□□□□ -0.54
PNKP-217ENST00000625216 OR8D2Q9GZM6 311 aa11.69□□□□□ -0.54
PNKP-217ENST00000625216 MMADHCQ9H3L0 296 aaPredicted RBP11.69□□□□□ -0.54
PNKP-217ENST00000625216 RMND5AQ9H871 391 aa11.69□□□□□ -0.54
PNKP-217ENST00000625216 ATAD3AQ9NVI7 634 aa11.69□□□□□ -0.54
PNKP-217ENST00000625216 CMTM6Q9NX76 183 aa11.69□□□□□ -0.54
PNKP-217ENST00000625216 EHD3Q9NZN3 535 aa11.69□□□□□ -0.54
PNKP-217ENST00000625216 ABCD2Q9UBJ2 740 aa11.69□□□□□ -0.54
PNKP-217ENST00000625216 COPS7AQ9UBW8 275 aa11.69□□□□□ -0.54
PNKP-217ENST00000625216 BTNL2Q9UIR0 455 aa11.69□□□□□ -0.54
PNKP-217ENST00000625216 CES1P1Q9UKY3 287 aa11.69□□□□□ -0.54
PNKP-217ENST00000625216 NPIPA1Q9UND3 350 aa11.69□□□□□ -0.54
PNKP-217ENST00000625216 UNC79Q9P2D8 2635 aa11.69□□□□□ -0.54
PNKP-217ENST00000625216 PRSS51A0A1B0GVH4 220 aa11.68□□□□□ -0.54
PNKP-217ENST00000625216 A0A1W2PS29 197 aa11.68□□□□□ -0.54
PNKP-217ENST00000625216 C1orf226A1L170 272 aa11.68□□□□□ -0.54
PNKP-217ENST00000625216 GLOD5A6NK44 160 aa11.68□□□□□ -0.54
PNKP-217ENST00000625216 A8MVJ9 347 aa11.68□□□□□ -0.54
PNKP-217ENST00000625216 RNASET2O00584 256 aaKnown RBP11.68□□□□□ -0.54
PNKP-217ENST00000625216 CCL21O00585 134 aa11.68□□□□□ -0.54
PNKP-217ENST00000625216 RFXANKO14593 260 aa11.68□□□□□ -0.54
PNKP-217ENST00000625216 PGRMC2O15173 223 aa11.68□□□□□ -0.54
PNKP-217ENST00000625216 PDPK1O15530 556 aa11.68□□□□□ -0.54
PNKP-217ENST00000625216 PEX1O43933 1283 aa11.68□□□□□ -0.54
PNKP-217ENST00000625216 FGF17O60258 216 aa11.68□□□□□ -0.54
PNKP-217ENST00000625216 PRKNO60260 465 aaPredicted RBP11.68□□□□□ -0.54
PNKP-217ENST00000625216 ZG16O60844 167 aa11.68□□□□□ -0.54
PNKP-217ENST00000625216 GUCY1B2O75343 617 aa11.68□□□□□ -0.54
PNKP-217ENST00000625216 OR2J2O76002 312 aa11.68□□□□□ -0.54
PNKP-217ENST00000625216 CPSF4O95639 269 aaKnown RBP11.68□□□□□ -0.54
PNKP-217ENST00000625216 GPR75O95800 540 aa11.68□□□□□ -0.54
PNKP-217ENST00000625216 C6orf47O95873 294 aa11.68□□□□□ -0.54
PNKP-217ENST00000625216 C1QCP02747 245 aa11.68□□□□□ -0.54
PNKP-217ENST00000625216 GSNP06396 782 aa11.68□□□□□ -0.54
PNKP-217ENST00000625216 GALNSP34059 522 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms