RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 IGKV3-11P04433 115 aa13.23□□□□□ -0.29
CLTCL1-212ENST00000622493 CRYBA2P53672 197 aa13.23□□□□□ -0.29
CLTCL1-212ENST00000622493 HPCAP84074 193 aa13.23□□□□□ -0.29
CLTCL1-212ENST00000622493 FUT5Q11128 374 aa13.23□□□□□ -0.29
CLTCL1-212ENST00000622493 TARDBPQ13148 414 aaKnown RBP eCLIP13.23□□□□□ -0.293e-6■■■■□ 20.1
CLTCL1-212ENST00000622493 NCF4Q15080 339 aa13.23□□□□□ -0.29
CLTCL1-212ENST00000622493 DUSP5Q16690 384 aa13.23□□□□□ -0.29
CLTCL1-212ENST00000622493 GPAT3Q53EU6 434 aa13.23□□□□□ -0.29
CLTCL1-212ENST00000622493 CYBRD1Q53TN4 286 aa13.23□□□□□ -0.29
CLTCL1-212ENST00000622493 C3orf38Q5JPI3 329 aa13.23□□□□□ -0.29
CLTCL1-212ENST00000622493 AP1ARQ63HQ0 302 aa13.23□□□□□ -0.29
CLTCL1-212ENST00000622493 FAM198BQ6UWH4 519 aa13.23□□□□□ -0.29
CLTCL1-212ENST00000622493 ENPP6Q6UWR7 440 aa13.23□□□□□ -0.29
CLTCL1-212ENST00000622493 LRRC74BQ6ZQY2 392 aa13.23□□□□□ -0.29
CLTCL1-212ENST00000622493 SHISA6Q6ZSJ9 500 aa13.23□□□□□ -0.29
CLTCL1-212ENST00000622493 ANKFN1Q8N957 763 aa13.23□□□□□ -0.29
CLTCL1-212ENST00000622493 CHDHQ8NE62 594 aaPredicted RBP13.23□□□□□ -0.29
CLTCL1-212ENST00000622493 SLC2A12Q8TD20 617 aa13.23□□□□□ -0.29
CLTCL1-212ENST00000622493 PMM1Q92871 262 aa13.23□□□□□ -0.29
CLTCL1-212ENST00000622493 CDS1Q92903 461 aa13.23□□□□□ -0.29
CLTCL1-212ENST00000622493 SLC47A1Q96FL8 570 aa13.23□□□□□ -0.29
CLTCL1-212ENST00000622493 VSTM2LQ96N03 204 aa13.23□□□□□ -0.29
CLTCL1-212ENST00000622493 DOHHQ9BU89 302 aa13.23□□□□□ -0.29
CLTCL1-212ENST00000622493 CRB3Q9BUF7 120 aa13.23□□□□□ -0.29
CLTCL1-212ENST00000622493 CHID1Q9BWS9 393 aa13.23□□□□□ -0.29
CLTCL1-212ENST00000622493 FOLH1BQ9HBA9 442 aa13.23□□□□□ -0.29
CLTCL1-212ENST00000622493 KCNE3Q9Y6H6 103 aa13.23□□□□□ -0.29
CLTCL1-212ENST00000622493 A0A1W2PNU3 283 aaPredicted RBP13.22□□□□□ -0.29
CLTCL1-212ENST00000622493 HRKO00198 91 aa13.22□□□□□ -0.29
CLTCL1-212ENST00000622493 BRINP1O60477 761 aa13.22□□□□□ -0.29
CLTCL1-212ENST00000622493 DDAH2O95865 285 aa13.22□□□□□ -0.29
CLTCL1-212ENST00000622493 FASP25445 335 aa13.22□□□□□ -0.29
CLTCL1-212ENST00000622493 SLC37A1P57057 533 aa13.22□□□□□ -0.29
CLTCL1-212ENST00000622493 PSG6Q00889 435 aa13.22□□□□□ -0.29
CLTCL1-212ENST00000622493 ZNF155Q12901 538 aaPredicted RBP13.22□□□□□ -0.29
CLTCL1-212ENST00000622493 FAM199XQ6PEV8 388 aaPredicted RBP13.22□□□□□ -0.29
CLTCL1-212ENST00000622493 TMEM205Q6UW68 189 aa13.22□□□□□ -0.29
CLTCL1-212ENST00000622493 RNF111Q6ZNA4 994 aa13.22□□□□□ -0.29
CLTCL1-212ENST00000622493 ANKRD37Q7Z713 158 aa13.22□□□□□ -0.29
CLTCL1-212ENST00000622493 FAM86B1Q8N7N1 296 aa13.22□□□□□ -0.29
CLTCL1-212ENST00000622493 COX18Q8N8Q8 333 aa13.22□□□□□ -0.29
CLTCL1-212ENST00000622493 C16orf52Q8NHV5 167 aa13.22□□□□□ -0.29
CLTCL1-212ENST00000622493 GPR151Q8TDV0 419 aa13.22□□□□□ -0.29
CLTCL1-212ENST00000622493 ZNF721Q8TF20 911 aa13.22□□□□□ -0.29
CLTCL1-212ENST00000622493 TAMM41Q96BW9 452 aa13.22□□□□□ -0.29
CLTCL1-212ENST00000622493 OTUB1Q96FW1 271 aaPredicted RBP13.22□□□□□ -0.29
CLTCL1-212ENST00000622493 SLC46A1Q96NT5 459 aa13.22□□□□□ -0.29
CLTCL1-212ENST00000622493 FAM117AQ9C073 453 aa13.22□□□□□ -0.29
CLTCL1-212ENST00000622493 OR8D2Q9GZM6 311 aa13.22□□□□□ -0.29
CLTCL1-212ENST00000622493 VCXQ9H320 206 aa13.22□□□□□ -0.29
CLTCL1-212ENST00000622493 COPS7AQ9UBW8 275 aa13.22□□□□□ -0.29
CLTCL1-212ENST00000622493 GPC6Q9Y625 555 aaPredicted RBP13.22□□□□□ -0.29
CLTCL1-212ENST00000622493 RIF1Q5UIP0 2472 aaKnown RBP13.22□□□□□ -0.29
CLTCL1-212ENST00000622493 SLC30A4O14863 429 aa13.22□□□□□ -0.29
CLTCL1-212ENST00000622493 MFN2O95140 757 aa13.22□□□□□ -0.29
CLTCL1-212ENST00000622493 SLC34A2O95436 690 aa13.22□□□□□ -0.29
CLTCL1-212ENST00000622493 H6PDO95479 791 aa13.22□□□□□ -0.29
CLTCL1-212ENST00000622493 CLPSP04118 112 aa13.22□□□□□ -0.29
CLTCL1-212ENST00000622493 CHRM4P08173 479 aa13.22□□□□□ -0.29
CLTCL1-212ENST00000622493 GUSBP08236 651 aa13.22□□□□□ -0.29
CLTCL1-212ENST00000622493 GABRA3P34903 492 aa13.22□□□□□ -0.29
CLTCL1-212ENST00000622493 LANCL3Q6ZV70 420 aa13.22□□□□□ -0.29
CLTCL1-212ENST00000622493 FKBP9P1Q75LS8 142 aa13.22□□□□□ -0.29
CLTCL1-212ENST00000622493 ERMP1Q7Z2K6 904 aa13.22□□□□□ -0.29
CLTCL1-212ENST00000622493 WDR53Q7Z5U6 358 aaPredicted RBP13.22□□□□□ -0.29
CLTCL1-212ENST00000622493 ARMC8Q8IUR7 673 aa13.22□□□□□ -0.29
CLTCL1-212ENST00000622493 GALNT15Q8N3T1 639 aa13.22□□□□□ -0.29
CLTCL1-212ENST00000622493 OR1N1Q8NGS0 311 aa13.22□□□□□ -0.29
CLTCL1-212ENST00000622493 DNAJC9Q8WXX5 260 aa13.22□□□□□ -0.29
CLTCL1-212ENST00000622493 Q9N2J8 555 aa13.22□□□□□ -0.29
CLTCL1-212ENST00000622493 POLE3Q9NRF9 147 aa13.22□□□□□ -0.29
CLTCL1-212ENST00000622493 BAG5Q9UL15 447 aa13.22□□□□□ -0.29
CLTCL1-212ENST00000622493 PPIEQ9UNP9 301 aaKnown RBP13.22□□□□□ -0.29
CLTCL1-212ENST00000622493 PADI2Q9Y2J8 665 aa13.22□□□□□ -0.29
CLTCL1-212ENST00000622493 V9GYQ6 96 aa13.22□□□□□ -0.29
CLTCL1-212ENST00000622493 DSPPQ9NZW4 1301 aa13.21□□□□□ -0.29
CLTCL1-212ENST00000622493 KNTC1P50748 2209 aa13.21□□□□□ -0.29
CLTCL1-212ENST00000622493 PMS2P1A4D2B8 440 aa13.21□□□□□ -0.3
CLTCL1-212ENST00000622493 OR6C76A6NM76 312 aa13.21□□□□□ -0.3
CLTCL1-212ENST00000622493 A8MUA0 341 aa13.21□□□□□ -0.3
CLTCL1-212ENST00000622493 NME6O75414 186 aaPredicted RBP13.21□□□□□ -0.3
CLTCL1-212ENST00000622493 STX11O75558 287 aa13.21□□□□□ -0.3
CLTCL1-212ENST00000622493 KLF7O75840 302 aaPredicted RBP13.21□□□□□ -0.3
CLTCL1-212ENST00000622493 RAB40ALP0C0E4 278 aa13.21□□□□□ -0.3
CLTCL1-212ENST00000622493 VHLP40337 213 aa13.21□□□□□ -0.3
CLTCL1-212ENST00000622493 MAGEA2P43356 314 aa13.21□□□□□ -0.3
CLTCL1-212ENST00000622493 NOVA1P51513 510 aaKnown RBP13.21□□□□□ -0.3
CLTCL1-212ENST00000622493 DCAF7P61962 342 aa13.21□□□□□ -0.3
CLTCL1-212ENST00000622493 POU6F2P78424 691 aaPredicted RBP13.21□□□□□ -0.3
CLTCL1-212ENST00000622493 SFT2D3Q587I9 215 aa13.21□□□□□ -0.3
CLTCL1-212ENST00000622493 RPS26P11Q5JNZ5 115 aaPredicted RBP13.21□□□□□ -0.3
CLTCL1-212ENST00000622493 DCST2Q5T1A1 773 aa13.21□□□□□ -0.3
CLTCL1-212ENST00000622493 CPEB2Q7Z5Q1 589 aaKnown RBP13.21□□□□□ -0.3
CLTCL1-212ENST00000622493 GALNT10Q86SR1 603 aa13.21□□□□□ -0.3
CLTCL1-212ENST00000622493 LILRA2Q8N149 483 aa13.21□□□□□ -0.3
CLTCL1-212ENST00000622493 ESX1Q8N693 406 aa13.21□□□□□ -0.3
CLTCL1-212ENST00000622493 OR2Y1Q8NGV0 311 aa13.21□□□□□ -0.3
CLTCL1-212ENST00000622493 ADAMTS14Q8WXS8 1223 aa13.21□□□□□ -0.3
CLTCL1-212ENST00000622493 HSH2DQ96JZ2 352 aa13.21□□□□□ -0.3
CLTCL1-212ENST00000622493 BTBD9Q96Q07 612 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms