RNA–Protein interactions for RNA: ENST00000622179.4

SIRPA-204, Transcript of signal regulatory protein alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SIRPA, Length 4,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-204ENST00000622179 WASH2PQ6VEQ5 465 aa12.5□□□□□ -0.41
SIRPA-204ENST00000622179 TSEN15Q8WW01 171 aaKnown RBP12.5□□□□□ -0.41
SIRPA-204ENST00000622179 NR4A3Q92570 626 aa12.5□□□□□ -0.41
SIRPA-204ENST00000622179 COQ8BQ96D53 544 aa12.5□□□□□ -0.41
SIRPA-204ENST00000622179 COQ10AQ96MF6 247 aa12.5□□□□□ -0.41
SIRPA-204ENST00000622179 OR7D2Q96RA2 312 aa12.5□□□□□ -0.41
SIRPA-204ENST00000622179 TBL1XR1Q9BZK7 514 aa12.5□□□□□ -0.41
SIRPA-204ENST00000622179 TMEM168Q9H0V1 697 aa12.5□□□□□ -0.41
SIRPA-204ENST00000622179 TMEM138Q9NPI0 162 aa12.5□□□□□ -0.41
SIRPA-204ENST00000622179 ZC4H2Q9NQZ6 224 aa12.5□□□□□ -0.41
SIRPA-204ENST00000622179 PRTFDC1Q9NRG1 225 aa12.5□□□□□ -0.41
SIRPA-204ENST00000622179 ACSS1Q9NUB1 689 aaPredicted RBP12.5□□□□□ -0.41
SIRPA-204ENST00000622179 COPS7AQ9UBW8 275 aa12.5□□□□□ -0.41
SIRPA-204ENST00000622179 PSORS1C1Q9UIG5 152 aa12.5□□□□□ -0.41
SIRPA-204ENST00000622179 GNG8Q9UK08 70 aa12.5□□□□□ -0.41
SIRPA-204ENST00000622179 PCDHGA6Q9Y5G7 932 aa12.5□□□□□ -0.41
SIRPA-204ENST00000622179 SCN10AQ9Y5Y9 1956 aa12.5□□□□□ -0.41
SIRPA-204ENST00000622179 FAM183AA6NL82 134 aa12.5□□□□□ -0.41
SIRPA-204ENST00000622179 CTDSP2O14595 271 aa12.5□□□□□ -0.41
SIRPA-204ENST00000622179 CSTAP01040 98 aa12.5□□□□□ -0.41
SIRPA-204ENST00000622179 ADORA3P0DMS8 318 aa12.5□□□□□ -0.41
SIRPA-204ENST00000622179 EDNRAP25101 427 aa12.5□□□□□ -0.41
SIRPA-204ENST00000622179 LIPAP38571 399 aa12.5□□□□□ -0.41
SIRPA-204ENST00000622179 LTB4RQ15722 352 aa12.5□□□□□ -0.41
SIRPA-204ENST00000622179 ADAMTSL4Q6UY14 1074 aa12.5□□□□□ -0.41
SIRPA-204ENST00000622179 OR5M3Q8NGP4 307 aa12.5□□□□□ -0.41
SIRPA-204ENST00000622179 MOSPD2Q8NHP6 518 aa12.5□□□□□ -0.41
SIRPA-204ENST00000622179 TRIM63Q969Q1 353 aa12.5□□□□□ -0.41
SIRPA-204ENST00000622179 PTCHD1Q96NR3 888 aa12.5□□□□□ -0.41
SIRPA-204ENST00000622179 SAP130Q9H0E3 1048 aa12.5□□□□□ -0.41
SIRPA-204ENST00000622179 EGLN3Q9H6Z9 239 aa12.5□□□□□ -0.41
SIRPA-204ENST00000622179 ACTR10Q9NZ32 417 aa12.5□□□□□ -0.41
SIRPA-204ENST00000622179 OR6C2Q9NZP2 312 aa12.5□□□□□ -0.41
SIRPA-204ENST00000622179 APOBEC3BQ9UH17 382 aaKnown RBP12.5□□□□□ -0.41
SIRPA-204ENST00000622179 SH2B3Q9UQQ2 575 aa12.5□□□□□ -0.41
SIRPA-204ENST00000622179 BRCA1P38398 1863 aaKnown RBP12.49□□□□□ -0.41
SIRPA-204ENST00000622179 DLGAP1O14490 977 aa12.49□□□□□ -0.41
SIRPA-204ENST00000622179 ATP5A1P25705 553 aaKnown RBP12.49□□□□□ -0.41
SIRPA-204ENST00000622179 Q8N9G6 341 aaPredicted RBP12.49□□□□□ -0.41
SIRPA-204ENST00000622179 ZBTB8BQ8NAP8 495 aaPredicted RBP12.49□□□□□ -0.41
SIRPA-204ENST00000622179 OR5M11Q96RB7 305 aa12.49□□□□□ -0.41
SIRPA-204ENST00000622179 BCL7BQ9BQE9 202 aa12.49□□□□□ -0.41
SIRPA-204ENST00000622179 ASCC3Q8N3C0 2202 aaKnown RBP12.49□□□□□ -0.41
SIRPA-204ENST00000622179 IGLV3-16A0A075B6K0 115 aa12.49□□□□□ -0.41
SIRPA-204ENST00000622179 THEGLP0DJG4 465 aa12.49□□□□□ -0.41
SIRPA-204ENST00000622179 ACSL1P33121 698 aa12.49□□□□□ -0.41
SIRPA-204ENST00000622179 PSMD4P55036 377 aaKnown RBP12.49□□□□□ -0.41
SIRPA-204ENST00000622179 SLC35A2P78381 396 aa12.49□□□□□ -0.41
SIRPA-204ENST00000622179 ZNF181Q2M3W8 571 aa12.49□□□□□ -0.41
SIRPA-204ENST00000622179 TMEM52BQ4KMG9 183 aa12.49□□□□□ -0.41
SIRPA-204ENST00000622179 PROKR2Q8NFJ6 384 aa12.49□□□□□ -0.41
SIRPA-204ENST00000622179 OR6Q1Q8NGQ2 317 aa12.49□□□□□ -0.41
SIRPA-204ENST00000622179 NEURL3Q96EH8 262 aa12.49□□□□□ -0.41
SIRPA-204ENST00000622179 TGM7Q96PF1 710 aa12.49□□□□□ -0.41
SIRPA-204ENST00000622179 TIMM29Q9BSF4 260 aa12.49□□□□□ -0.41
SIRPA-204ENST00000622179 BEX2Q9BXY8 128 aa12.49□□□□□ -0.41
SIRPA-204ENST00000622179 BRD7Q9NPI1 651 aa12.49□□□□□ -0.41
SIRPA-204ENST00000622179 ING4Q9UNL4 249 aa12.49□□□□□ -0.41
SIRPA-204ENST00000622179 PCDHGB6Q9Y5F9 930 aa12.49□□□□□ -0.41
SIRPA-204ENST00000622179 MICAL3Q7RTP6 2002 aa12.49□□□□□ -0.41
SIRPA-204ENST00000622179 LCTP09848 1927 aa12.49□□□□□ -0.41
SIRPA-204ENST00000622179 SCDO00767 359 aa12.49□□□□□ -0.41
SIRPA-204ENST00000622179 ORC5O43913 435 aa12.49□□□□□ -0.41
SIRPA-204ENST00000622179 KCNJ13O60928 360 aa12.49□□□□□ -0.41
SIRPA-204ENST00000622179 MT-ND5P03915 603 aa12.49□□□□□ -0.41
SIRPA-204ENST00000622179 HK1P19367 917 aa12.49□□□□□ -0.41
SIRPA-204ENST00000622179 PXNP49023 591 aaPredicted RBP12.49□□□□□ -0.41
SIRPA-204ENST00000622179 GP2P55259 537 aaKnown RBP12.49□□□□□ -0.41
SIRPA-204ENST00000622179 RELAQ04206 551 aa12.49□□□□□ -0.41
SIRPA-204ENST00000622179 ZNF91Q05481 1191 aa12.49□□□□□ -0.41
SIRPA-204ENST00000622179 EXOSC7Q15024 291 aaKnown RBP12.49□□□□□ -0.41
SIRPA-204ENST00000622179 ACBD7Q8N6N7 88 aa12.49□□□□□ -0.41
SIRPA-204ENST00000622179 OR2L3Q8NG85 312 aa12.49□□□□□ -0.41
SIRPA-204ENST00000622179 RHOXF1Q8NHV9 184 aa12.49□□□□□ -0.41
SIRPA-204ENST00000622179 PIGKQ92643 395 aa12.49□□□□□ -0.41
SIRPA-204ENST00000622179 PRRC1Q96M27 445 aa12.49□□□□□ -0.41
SIRPA-204ENST00000622179 MS4A4EQ96PG1 132 aa12.49□□□□□ -0.41
SIRPA-204ENST00000622179 HDAC8Q9BY41 377 aa12.49□□□□□ -0.41
SIRPA-204ENST00000622179 KLHL31Q9H511 634 aa12.49□□□□□ -0.41
SIRPA-204ENST00000622179 MIA3Q5JRA6 1907 aa12.49□□□□□ -0.41
SIRPA-204ENST00000622179 SGK494L7N484 410 aa12.49□□□□□ -0.41
SIRPA-204ENST00000622179 JUNBP17275 347 aaPredicted RBP12.49□□□□□ -0.41
SIRPA-204ENST00000622179 SLC6A6P31641 620 aa12.49□□□□□ -0.41
SIRPA-204ENST00000622179 STAT5AP42229 794 aa12.49□□□□□ -0.41
SIRPA-204ENST00000622179 NKX2-5P52952 324 aaPredicted RBP12.49□□□□□ -0.41
SIRPA-204ENST00000622179 DECR1Q16698 335 aa12.49□□□□□ -0.41
SIRPA-204ENST00000622179 FAM210AQ96ND0 272 aa12.49□□□□□ -0.41
SIRPA-204ENST00000622179 AMDHD1Q96NU7 426 aa12.49□□□□□ -0.41
SIRPA-204ENST00000622179 CENPOQ9BU64 300 aa12.49□□□□□ -0.41
SIRPA-204ENST00000622179 PINK1Q9BXM7 581 aa12.49□□□□□ -0.41
SIRPA-204ENST00000622179 MED28Q9H204 178 aa12.49□□□□□ -0.41
SIRPA-204ENST00000622179 TMEM38AQ9H6F2 299 aa12.49□□□□□ -0.41
SIRPA-204ENST00000622179 TCF7L1Q9HCS4 588 aa12.49□□□□□ -0.41
SIRPA-204ENST00000622179 USP36Q9P275 1121 aaKnown RBP12.49□□□□□ -0.41
SIRPA-204ENST00000622179 SNX11Q9Y5W9 270 aa12.49□□□□□ -0.41
SIRPA-204ENST00000622179 AP1M2Q9Y6Q5 423 aa12.49□□□□□ -0.41
SIRPA-204ENST00000622179 A0A1W2PRG6 482 aa12.48□□□□□ -0.41
SIRPA-204ENST00000622179 TMPRSS11DO60235 418 aa12.48□□□□□ -0.41
SIRPA-204ENST00000622179 MRPS14O60783 128 aaKnown RBP12.48□□□□□ -0.41
SIRPA-204ENST00000622179 RLN1P04808 185 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms