RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 GNRHR2Q96P88 292 aa16.44■□□□□ 0.22
SCAMP4-213ENST00000621748 GIMAP4Q9NUV9 329 aa16.44■□□□□ 0.22
SCAMP4-213ENST00000621748 EXO1Q9UQ84 846 aaKnown RBP16.44■□□□□ 0.22
SCAMP4-213ENST00000621748 GPR55Q9Y2T6 319 aaPredicted RBP16.44■□□□□ 0.22
SCAMP4-213ENST00000621748 FAM215AQ9Y5M1 114 aa16.44■□□□□ 0.22
SCAMP4-213ENST00000621748 HCFC1P51610 2035 aa16.44■□□□□ 0.22
SCAMP4-213ENST00000621748 MYO1GB0I1T2 1018 aa16.43■□□□□ 0.22
SCAMP4-213ENST00000621748 SLCO1B7G3V0H7 640 aa16.43■□□□□ 0.22
SCAMP4-213ENST00000621748 TO15178 435 aa16.43■□□□□ 0.22
SCAMP4-213ENST00000621748 ACOX3O15254 700 aa16.43■□□□□ 0.22
SCAMP4-213ENST00000621748 UGT2B11O75310 529 aa16.43■□□□□ 0.22
SCAMP4-213ENST00000621748 BCAS2O75934 225 aaPredicted RBP16.43■□□□□ 0.22
SCAMP4-213ENST00000621748 RSL1D1O76021 490 aaKnown RBP16.43■□□□□ 0.22
SCAMP4-213ENST00000621748 COX6B1P14854 86 aa16.43■□□□□ 0.22
SCAMP4-213ENST00000621748 GDF1P27539 372 aa16.43■□□□□ 0.22
SCAMP4-213ENST00000621748 MPIP34949 423 aa16.43■□□□□ 0.22
SCAMP4-213ENST00000621748 DCAF7P61962 342 aa16.43■□□□□ 0.22
SCAMP4-213ENST00000621748 RPP38P78345 283 aaKnown RBP16.43■□□□□ 0.22
SCAMP4-213ENST00000621748 PLCXD2Q0VAA5 305 aa16.43■□□□□ 0.22
SCAMP4-213ENST00000621748 KIAA0040Q15053 153 aa16.43■□□□□ 0.22
SCAMP4-213ENST00000621748 WLSQ5T9L3 541 aa16.43■□□□□ 0.22
SCAMP4-213ENST00000621748 NOXRED1Q6NXP6 359 aa16.43■□□□□ 0.22
SCAMP4-213ENST00000621748 NUP54Q7Z3B4 507 aa16.43■□□□□ 0.22
SCAMP4-213ENST00000621748 PACS2Q86VP3 889 aa16.43■□□□□ 0.22
SCAMP4-213ENST00000621748 DDIASQ8IXT1 998 aa16.43■□□□□ 0.22
SCAMP4-213ENST00000621748 OR7G2Q8NG99 324 aa16.43■□□□□ 0.22
SCAMP4-213ENST00000621748 NEIL3Q8TAT5 605 aa16.43■□□□□ 0.22
SCAMP4-213ENST00000621748 ERP27Q96DN0 273 aa16.43■□□□□ 0.22
SCAMP4-213ENST00000621748 NODALQ96S42 347 aa16.43■□□□□ 0.22
SCAMP4-213ENST00000621748 CCT7Q99832 543 aa16.43■□□□□ 0.22
SCAMP4-213ENST00000621748 TTYH2Q9BSA4 534 aa16.43■□□□□ 0.22
SCAMP4-213ENST00000621748 UBQLN3Q9H347 655 aa16.43■□□□□ 0.22
SCAMP4-213ENST00000621748 MYNNQ9NPC7 610 aa16.43■□□□□ 0.22
SCAMP4-213ENST00000621748 B4GALT7Q9UBV7 327 aa16.43■□□□□ 0.22
SCAMP4-213ENST00000621748 ARHGAP21Q5T5U3 1957 aa16.43■□□□□ 0.22
SCAMP4-213ENST00000621748 FRG2CA6NGY1 282 aa16.42■□□□□ 0.22
SCAMP4-213ENST00000621748 FIGNL2A6NMB9 653 aa16.42■□□□□ 0.22
SCAMP4-213ENST00000621748 SLC28A1O00337 649 aa16.42■□□□□ 0.22
SCAMP4-213ENST00000621748 RGS14O43566 566 aa16.42■□□□□ 0.22
SCAMP4-213ENST00000621748 PLOD3O60568 738 aa16.42■□□□□ 0.22
SCAMP4-213ENST00000621748 SEC22BO75396 215 aa16.42■□□□□ 0.22
SCAMP4-213ENST00000621748 CHRNGP07510 517 aa16.42■□□□□ 0.22
SCAMP4-213ENST00000621748 FGF4P08620 206 aa16.42■□□□□ 0.22
SCAMP4-213ENST00000621748 CT45A8P0DMV1 189 aa16.42■□□□□ 0.22
SCAMP4-213ENST00000621748 CT45A9P0DMV2 189 aa16.42■□□□□ 0.22
SCAMP4-213ENST00000621748 GLI4P10075 376 aa16.42■□□□□ 0.22
SCAMP4-213ENST00000621748 CHRNB4P30926 498 aa16.42■□□□□ 0.22
SCAMP4-213ENST00000621748 PTGDSP41222 190 aa16.42■□□□□ 0.22
SCAMP4-213ENST00000621748 RPL14P50914 215 aaKnown RBP16.42■□□□□ 0.22
SCAMP4-213ENST00000621748 CORO7P57737 925 aa16.42■□□□□ 0.22
SCAMP4-213ENST00000621748 CT45A2Q5DJT8 189 aa16.42■□□□□ 0.22
SCAMP4-213ENST00000621748 B3GNT6Q6ZMB0 384 aa16.42■□□□□ 0.22
SCAMP4-213ENST00000621748 Q6ZSR9 355 aa16.42■□□□□ 0.22
SCAMP4-213ENST00000621748 ACAD11Q709F0 780 aa16.42■□□□□ 0.22
SCAMP4-213ENST00000621748 FAM9CQ8IZT9 166 aa16.42■□□□□ 0.22
SCAMP4-213ENST00000621748 OR2T11Q8NH01 316 aa16.42■□□□□ 0.22
SCAMP4-213ENST00000621748 LILRB4Q8NHJ6 448 aa16.42■□□□□ 0.22
SCAMP4-213ENST00000621748 ASB5Q8WWX0 329 aa16.42■□□□□ 0.22
SCAMP4-213ENST00000621748 TMBIM1Q969X1 311 aa16.42■□□□□ 0.22
SCAMP4-213ENST00000621748 TMEM41AQ96HV5 264 aa16.42■□□□□ 0.22
SCAMP4-213ENST00000621748 EGLN2Q96KS0 407 aa16.42■□□□□ 0.22
SCAMP4-213ENST00000621748 VSTM2LQ96N03 204 aa16.42■□□□□ 0.22
SCAMP4-213ENST00000621748 BTBD9Q96Q07 612 aa16.42■□□□□ 0.22
SCAMP4-213ENST00000621748 BBS4Q96RK4 519 aa16.42■□□□□ 0.22
SCAMP4-213ENST00000621748 UCK2Q9BZX2 261 aa16.42■□□□□ 0.22
SCAMP4-213ENST00000621748 TUBB1Q9H4B7 451 aa16.42■□□□□ 0.22
SCAMP4-213ENST00000621748 RUBCNLQ9H714 662 aa16.42■□□□□ 0.22
SCAMP4-213ENST00000621748 ALKBH4Q9NXW9 302 aa16.42■□□□□ 0.22
SCAMP4-213ENST00000621748 TAS2R7Q9NYW3 318 aa16.42■□□□□ 0.22
SCAMP4-213ENST00000621748 C15orf41Q9Y2V0 281 aa16.42■□□□□ 0.22
SCAMP4-213ENST00000621748 C2orf72A6NCS6 295 aa16.41■□□□□ 0.22
SCAMP4-213ENST00000621748 NPIPB8E9PQR5 432 aa16.41■□□□□ 0.22
SCAMP4-213ENST00000621748 GNB5O14775 395 aa16.41■□□□□ 0.22
SCAMP4-213ENST00000621748 POLR3GO15318 223 aaPredicted RBP16.41■□□□□ 0.22
SCAMP4-213ENST00000621748 WDR1O75083 606 aa16.41■□□□□ 0.22
SCAMP4-213ENST00000621748 ICOSLGO75144 302 aa16.41■□□□□ 0.22
SCAMP4-213ENST00000621748 LYPLA1O75608 230 aaPredicted RBP16.41■□□□□ 0.22
SCAMP4-213ENST00000621748 TRAPPC6AO75865 159 aa16.41■□□□□ 0.22
SCAMP4-213ENST00000621748 JUNP05412 331 aaKnown RBP16.41■□□□□ 0.22
SCAMP4-213ENST00000621748 VIMP08670 466 aaKnown RBP16.41■□□□□ 0.22
SCAMP4-213ENST00000621748 PRPH2P23942 346 aa16.41■□□□□ 0.22
SCAMP4-213ENST00000621748 TACR1P25103 407 aa16.41■□□□□ 0.22
SCAMP4-213ENST00000621748 PTGER4P35408 488 aa16.41■□□□□ 0.22
SCAMP4-213ENST00000621748 MDH1P40925 334 aaKnown RBP16.41■□□□□ 0.22
SCAMP4-213ENST00000621748 MASP1P48740 699 aa16.41■□□□□ 0.22
SCAMP4-213ENST00000621748 CDK9P50750 372 aaKnown RBP16.41■□□□□ 0.22
SCAMP4-213ENST00000621748 TIGD3Q6B0B8 471 aa16.41■□□□□ 0.22
SCAMP4-213ENST00000621748 TMEM81Q6P7N7 255 aa16.41■□□□□ 0.22
SCAMP4-213ENST00000621748 NPSR1Q6W5P4 371 aa16.41■□□□□ 0.22
SCAMP4-213ENST00000621748 WDR75Q8IWA0 830 aaKnown RBP16.41■□□□□ 0.22
SCAMP4-213ENST00000621748 ZNF295-AS1Q8N0V1 137 aa16.41■□□□□ 0.22
SCAMP4-213ENST00000621748 LIX1Q8N485 282 aa16.41■□□□□ 0.22
SCAMP4-213ENST00000621748 OR6Y1Q8NGX8 325 aa16.41■□□□□ 0.22
SCAMP4-213ENST00000621748 METTL7AQ9H8H3 244 aa16.41■□□□□ 0.22
SCAMP4-213ENST00000621748 FOLH1BQ9HBA9 442 aa16.41■□□□□ 0.22
SCAMP4-213ENST00000621748 GALNT9Q9HCQ5 603 aa16.41■□□□□ 0.22
SCAMP4-213ENST00000621748 MIEF1Q9NQG6 463 aa16.41■□□□□ 0.22
SCAMP4-213ENST00000621748 WBP11Q9Y2W2 641 aaKnown RBP16.41■□□□□ 0.22
SCAMP4-213ENST00000621748 MYO9AB2RTY4 2548 aa16.41■□□□□ 0.22
SCAMP4-213ENST00000621748 NKX2-6A6NCS4 301 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms