RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 CT45A2Q5DJT8 189 aa21.87■■□□□ 1.09
ATXN3-253ENST00000621269 CFAP157Q5JU67 520 aa21.87■■□□□ 1.09
ATXN3-253ENST00000621269 GSPT2Q8IYD1 628 aaKnown RBP21.87■■□□□ 1.09
ATXN3-253ENST00000621269 WDSUB1Q8N9V3 476 aa21.87■■□□□ 1.09
ATXN3-253ENST00000621269 RDH11Q8TC12 318 aa21.87■■□□□ 1.09
ATXN3-253ENST00000621269 C11orf24Q96F05 449 aaPredicted RBP21.87■■□□□ 1.09
ATXN3-253ENST00000621269 SLC35A4Q96G79 324 aa21.87■■□□□ 1.09
ATXN3-253ENST00000621269 VSTM2LQ96N03 204 aa21.87■■□□□ 1.09
ATXN3-253ENST00000621269 STMN4Q9H169 189 aaPredicted RBP21.87■■□□□ 1.09
ATXN3-253ENST00000621269 FOLH1BQ9HBA9 442 aa21.87■■□□□ 1.09
ATXN3-253ENST00000621269 PLOD3O60568 738 aa21.86■■□□□ 1.09
ATXN3-253ENST00000621269 CYP4B1P13584 511 aa21.86■■□□□ 1.09
ATXN3-253ENST00000621269 DDCP20711 480 aa21.86■■□□□ 1.09
ATXN3-253ENST00000621269 CCT5P48643 541 aa21.86■■□□□ 1.09
ATXN3-253ENST00000621269 FOXA1P55317 472 aa21.86■■□□□ 1.09
ATXN3-253ENST00000621269 CCDC153Q494R4 210 aa21.86■■□□□ 1.09
ATXN3-253ENST00000621269 ENPP6Q6UWR7 440 aa21.86■■□□□ 1.09
ATXN3-253ENST00000621269 LARP4Q71RC2 724 aaKnown RBP eCLIP21.86■■□□□ 1.09
ATXN3-253ENST00000621269 PLCZ1Q86YW0 608 aa21.86■■□□□ 1.09
ATXN3-253ENST00000621269 SLC44A2Q8IWA5 706 aaPredicted RBP21.86■■□□□ 1.09
ATXN3-253ENST00000621269 OR7G2Q8NG99 324 aa21.86■■□□□ 1.09
ATXN3-253ENST00000621269 ZPLD1Q8TCW7 415 aa21.86■■□□□ 1.09
ATXN3-253ENST00000621269 RNASE6Q93091 150 aaKnown RBP21.86■■□□□ 1.09
ATXN3-253ENST00000621269 OR2B2Q9GZK3 357 aa21.86■■□□□ 1.09
ATXN3-253ENST00000621269 MIEF1Q9NQG6 463 aa21.86■■□□□ 1.09
ATXN3-253ENST00000621269 DNAJB12Q9NXW2 375 aaKnown RBP21.86■■□□□ 1.09
ATXN3-253ENST00000621269 FOXD3Q9UJU5 478 aaPredicted RBP21.86■■□□□ 1.09
ATXN3-253ENST00000621269 GRID1Q9ULK0 1009 aa21.86■■□□□ 1.09
ATXN3-253ENST00000621269 OR10H1Q9Y4A9 318 aa21.86■■□□□ 1.09
ATXN3-253ENST00000621269 EXPH5Q8NEV8 1989 aa21.85■■□□□ 1.09
ATXN3-253ENST00000621269 MBD3L4A6NDZ8 208 aaPredicted RBP21.85■■□□□ 1.09
ATXN3-253ENST00000621269 MBD3L3A6NE82 208 aaPredicted RBP21.85■■□□□ 1.09
ATXN3-253ENST00000621269 MBD3L5A6NJ08 208 aaPredicted RBP21.85■■□□□ 1.09
ATXN3-253ENST00000621269 NME6O75414 186 aaPredicted RBP21.85■■□□□ 1.09
ATXN3-253ENST00000621269 PROCP04070 461 aa21.85■■□□□ 1.09
ATXN3-253ENST00000621269 CPN1P15169 458 aa21.85■■□□□ 1.09
ATXN3-253ENST00000621269 CTSSP25774 331 aa21.85■■□□□ 1.09
ATXN3-253ENST00000621269 ZNF136P52737 540 aa21.85■■□□□ 1.09
ATXN3-253ENST00000621269 MRPS22P82650 360 aaKnown RBP21.85■■□□□ 1.09
ATXN3-253ENST00000621269 SPNS3Q6ZMD2 512 aa21.85■■□□□ 1.09
ATXN3-253ENST00000621269 IFNEQ86WN2 208 aa21.85■■□□□ 1.09
ATXN3-253ENST00000621269 CCDC63Q8NA47 563 aa21.85■■□□□ 1.09
ATXN3-253ENST00000621269 MBD3L2Q8NHZ7 208 aaPredicted RBP21.85■■□□□ 1.09
ATXN3-253ENST00000621269 UBLCP1Q8WVY7 318 aaPredicted RBP21.85■■□□□ 1.09
ATXN3-253ENST00000621269 SH3GL2Q99962 352 aa21.85■■□□□ 1.09
ATXN3-253ENST00000621269 TAS2R10Q9NYW0 307 aa21.85■■□□□ 1.09
ATXN3-253ENST00000621269 CRIM1Q9NZV1 1036 aa21.85■■□□□ 1.09
ATXN3-253ENST00000621269 WIF1Q9Y5W5 379 aa21.85■■□□□ 1.09
ATXN3-253ENST00000621269 POLQO75417 2590 aa21.84■■□□□ 1.09
ATXN3-253ENST00000621269 MYO1GB0I1T2 1018 aa21.84■■□□□ 1.09
ATXN3-253ENST00000621269 H0Y3Z8 333 aa21.84■■□□□ 1.09
ATXN3-253ENST00000621269 TSPAN2O60636 221 aa21.84■■□□□ 1.09
ATXN3-253ENST00000621269 COQ9O75208 318 aa21.84■■□□□ 1.09
ATXN3-253ENST00000621269 OPRM1P35372 400 aa21.84■■□□□ 1.09
ATXN3-253ENST00000621269 SLCO1A2P46721 670 aa21.84■■□□□ 1.09
ATXN3-253ENST00000621269 NCBP2P52298 156 aaKnown RBP eCLIP21.84■■□□□ 1.095e-7■■■■□ 25.1
ATXN3-253ENST00000621269 PNLIPRP2P54317 469 aa21.84■■□□□ 1.09
ATXN3-253ENST00000621269 FBXL19-AS1Q494R0 122 aa21.84■■□□□ 1.09
ATXN3-253ENST00000621269 POMZP3Q6PJE2 187 aa21.84■■□□□ 1.09
ATXN3-253ENST00000621269 NPSR1Q6W5P4 371 aa21.84■■□□□ 1.09
ATXN3-253ENST00000621269 FRMD7Q6ZUT3 714 aa21.84■■□□□ 1.09
ATXN3-253ENST00000621269 TRIM46Q7Z4K8 759 aa21.84■■□□□ 1.09
ATXN3-253ENST00000621269 TRIM42Q8IWZ5 723 aa21.84■■□□□ 1.09
ATXN3-253ENST00000621269 EIF1ADQ8N9N8 165 aaKnown RBP21.84■■□□□ 1.09
ATXN3-253ENST00000621269 POLDIP3Q9BY77 421 aaKnown RBP21.84■■□□□ 1.09
ATXN3-253ENST00000621269 PPCSQ9HAB8 311 aa21.84■■□□□ 1.09
ATXN3-253ENST00000621269 RRAGDQ9NQL2 400 aaPredicted RBP21.84■■□□□ 1.09
ATXN3-253ENST00000621269 WBP11Q9Y2W2 641 aaKnown RBP21.84■■□□□ 1.09
ATXN3-253ENST00000621269 ARHGAP21Q5T5U3 1957 aa21.84■■□□□ 1.09
ATXN3-253ENST00000621269 AKAP9Q99996 3911 aa21.83■■□□□ 1.09
ATXN3-253ENST00000621269 INTS1Q8N201 2190 aaKnown RBP21.83■■□□□ 1.09
ATXN3-253ENST00000621269 CTAG2O75638 210 aa21.83■■□□□ 1.09
ATXN3-253ENST00000621269 SLITRK5O94991 958 aa21.83■■□□□ 1.09
ATXN3-253ENST00000621269 SHBGP04278 402 aa21.83■■□□□ 1.09
ATXN3-253ENST00000621269 JUNP05412 331 aaKnown RBP21.83■■□□□ 1.09
ATXN3-253ENST00000621269 SRD5A2P31213 254 aa21.83■■□□□ 1.09
ATXN3-253ENST00000621269 CRHR1P34998 444 aa21.83■■□□□ 1.09
ATXN3-253ENST00000621269 DNAJB13P59910 316 aa21.83■■□□□ 1.09
ATXN3-253ENST00000621269 SRYQ05066 204 aa21.83■■□□□ 1.09
ATXN3-253ENST00000621269 ZNF155Q12901 538 aaPredicted RBP21.83■■□□□ 1.09
ATXN3-253ENST00000621269 AAGABQ6PD74 315 aa21.83■■□□□ 1.09
ATXN3-253ENST00000621269 SH2D5Q6ZV89 423 aa21.83■■□□□ 1.09
ATXN3-253ENST00000621269 FAM76AQ8TAV0 307 aa21.83■■□□□ 1.09
ATXN3-253ENST00000621269 EFHD2Q96C19 240 aaPredicted RBP21.83■■□□□ 1.09
ATXN3-253ENST00000621269 TRIM44Q96DX7 344 aaPredicted RBP21.83■■□□□ 1.09
ATXN3-253ENST00000621269 MYNNQ9NPC7 610 aa21.83■■□□□ 1.09
ATXN3-253ENST00000621269 DKKL1Q9UK85 242 aa21.83■■□□□ 1.09
ATXN3-253ENST00000621269 POLR3HQ9Y535 204 aaPredicted RBP21.83■■□□□ 1.09
ATXN3-253ENST00000621269 SMIM23A6NLE4 172 aa21.82■■□□□ 1.08
ATXN3-253ENST00000621269 PLIN3O60664 434 aa21.82■■□□□ 1.08
ATXN3-253ENST00000621269 RSL1D1O76021 490 aaKnown RBP21.82■■□□□ 1.08
ATXN3-253ENST00000621269 CPA3P15088 417 aa21.82■■□□□ 1.08
ATXN3-253ENST00000621269 NTSP30990 170 aa21.82■■□□□ 1.08
ATXN3-253ENST00000621269 DNAJA1P31689 397 aaKnown RBP21.82■■□□□ 1.08
ATXN3-253ENST00000621269 AGFG1P52594 562 aaKnown RBP21.82■■□□□ 1.08
ATXN3-253ENST00000621269 DGKQP52824 942 aa21.82■■□□□ 1.08
ATXN3-253ENST00000621269 FLYWCH1Q4VC44 716 aa21.82■■□□□ 1.08
ATXN3-253ENST00000621269 OR5M10Q6IEU7 315 aa21.82■■□□□ 1.08
ATXN3-253ENST00000621269 FAM71E1Q6IPT2 247 aa21.82■■□□□ 1.08
ATXN3-253ENST00000621269 KIF18BQ86Y91 864 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms