RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 ENPP5Q9UJA9 477 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 FBXL4Q9UKA2 621 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 SLC45A1Q9Y2W3 748 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 BAZ2BQ9UIF8 2168 aaKnown RBP6.84□□□□□ -1.31
COLCA1-205ENST00000620864 ZNF487B1APH4 448 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 FAM163BP0C2L3 166 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 PFKLP17858 780 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 TACR2P21452 398 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 MTNR1AP48039 350 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 PTH2RP49190 550 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 PPP1R26Q5T8A7 1209 aaPredicted RBP6.84□□□□□ -1.31
COLCA1-205ENST00000620864 C22orf42Q6IC83 251 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 ZNF585AQ6P3V2 769 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 FAM111BQ6SJ93 734 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 SHFQ7M4L6 423 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 C6orf120Q7Z4R8 191 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 LRRC28Q86X40 367 aaPredicted RBP6.84□□□□□ -1.31
COLCA1-205ENST00000620864 ZDHHC14Q8IZN3 488 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 KLHDC1Q8N7A1 406 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 ZNF439Q8NDP4 499 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 ADAMTS14Q8WXS8 1223 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 FGGYQ96C11 551 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 SNX27Q96L92 541 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 EBF4Q9BQW3 602 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 SEMA6CQ9H3T2 930 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 FZD3Q9NPG1 666 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 FAM96BQ9Y3D0 163 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 RIPK3Q9Y572 518 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 YTHDF2Q9Y5A9 579 aaKnown RBP6.84□□□□□ -1.31
COLCA1-205ENST00000620864 CPQQ9Y646 472 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 LRP5LA4QPB2 252 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 OTOL1A6NHN0 477 aaPredicted RBP6.84□□□□□ -1.31
COLCA1-205ENST00000620864 SMLR1H3BR10 107 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 HEXAP06865 529 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 TPMTP51580 245 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 RNF4P78317 190 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 GPR68Q15743 365 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 HGSNATQ68CP4 663 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 SIAH1Q8IUQ4 282 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 NAT8LQ8N9F0 302 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 OR4K17Q8NGC6 315 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 LMO7Q8WWI1 1683 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 A0A0A6YYH2 397 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 A6NJ64 397 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 ZNF736B4DX44 427 aaPredicted RBP6.84□□□□□ -1.31
COLCA1-205ENST00000620864 MANBAO00462 879 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 BRINP1O60477 761 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 ACTL6BO94805 426 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 RAB40ALP0C0E4 278 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 PIRTP0C851 137 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 CALCRP30988 508 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 MLLT3P42568 568 aaPredicted RBP6.84□□□□□ -1.31
COLCA1-205ENST00000620864 RCAN2Q14206 197 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 LIPJQ5W064 366 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 CFAP52Q8N1V2 620 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 KCNRGQ8N5I3 272 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 SIDT2Q8NBJ9 832 aaKnown RBP6.84□□□□□ -1.31
COLCA1-205ENST00000620864 OR9A4Q8NGU2 314 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 ADAMTS18Q8TE60 1221 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 RNF141Q8WVD5 230 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 RAB40AQ8WXH6 277 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 ACOT11Q8WXI4 607 aaPredicted RBP6.84□□□□□ -1.31
COLCA1-205ENST00000620864 OR5P2Q8WZ92 322 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 KIAA1191Q96A73 305 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 ZNF681Q96N22 645 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 ZNF382Q96SR6 550 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 ZDHHC18Q9NUE0 388 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 CLEC4EQ9ULY5 219 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 COQ4Q9Y3A0 265 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 NFAT5O94916 1531 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 LOC285095A0A1B0GVY8 99 aa6.84□□□□□ -1.32
COLCA1-205ENST00000620864 H3BQ06 376 aaPredicted RBP6.84□□□□□ -1.32
COLCA1-205ENST00000620864 SLC16A5O15375 505 aa6.84□□□□□ -1.32
COLCA1-205ENST00000620864 KCNJ11Q14654 390 aa6.84□□□□□ -1.32
COLCA1-205ENST00000620864 LBHQ53QV2 105 aaPredicted RBP6.84□□□□□ -1.32
COLCA1-205ENST00000620864 SLC15A4Q8N697 577 aa6.84□□□□□ -1.32
COLCA1-205ENST00000620864 ABHD11Q8NFV4 315 aa6.84□□□□□ -1.32
COLCA1-205ENST00000620864 SORCS1Q8WY21 1168 aa6.84□□□□□ -1.32
COLCA1-205ENST00000620864 ST8SIA2Q92186 375 aa6.84□□□□□ -1.32
COLCA1-205ENST00000620864 KCNJ9Q92806 393 aa6.84□□□□□ -1.32
COLCA1-205ENST00000620864 PRR11Q96HE9 360 aaPredicted RBP6.84□□□□□ -1.32
COLCA1-205ENST00000620864 ZNF559Q9BR84 538 aa6.84□□□□□ -1.32
COLCA1-205ENST00000620864 PITHD1Q9GZP4 211 aaPredicted RBP6.84□□□□□ -1.32
COLCA1-205ENST00000620864 RBPJLQ9UBG7 517 aa6.84□□□□□ -1.32
COLCA1-205ENST00000620864 ACAD8Q9UKU7 415 aa6.84□□□□□ -1.32
COLCA1-205ENST00000620864 FZD10Q9ULW2 581 aa6.84□□□□□ -1.32
COLCA1-205ENST00000620864 IFT172Q9UG01 1749 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 SYN3O14994 580 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 TRAPPC2P0DI81 140 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 TRAPPC2BP0DI82 140 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 ZNF30P17039 623 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 GKP32189 559 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 MAP2K4P45985 399 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 WDR4P57081 412 aaKnown RBP6.83□□□□□ -1.32
COLCA1-205ENST00000620864 SLBPQ14493 270 aaKnown RBP eCLIP6.83□□□□□ -1.32
COLCA1-205ENST00000620864 GPR19Q15760 415 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 LCN8Q6JVE9 175 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 LDB1Q86U70 411 aaPredicted RBP6.83□□□□□ -1.32
COLCA1-205ENST00000620864 TPRA1Q86W33 373 aa6.83□□□□□ -1.32
COLCA1-205ENST00000620864 C15orf54Q8N8G6 183 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms