RNA–Protein interactions for RNA: ENST00000620309.4

PSMB3-212, Transcript of proteasome subunit beta 3, humanhuman

TSL 2

Gene PSMB3, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-212ENST00000620309 NUDT9Q9BW91 350 aa6.56□□□□□ -1.36
PSMB3-212ENST00000620309 ALOXE3Q9BYJ1 711 aa6.56□□□□□ -1.36
PSMB3-212ENST00000620309 DEFB126Q9BYW3 111 aa6.56□□□□□ -1.36
PSMB3-212ENST00000620309 TRIM8Q9BZR9 551 aa6.56□□□□□ -1.36
PSMB3-212ENST00000620309 C1orf21Q9H246 121 aa6.56□□□□□ -1.36
PSMB3-212ENST00000620309 MMP25Q9NPA2 562 aa6.56□□□□□ -1.36
PSMB3-212ENST00000620309 ZCCHC3Q9NUD5 404 aaKnown RBP6.56□□□□□ -1.36
PSMB3-212ENST00000620309 DDX18Q9NVP1 670 aaKnown RBP6.56□□□□□ -1.36
PSMB3-212ENST00000620309 GPATCH2Q9NW75 528 aa6.56□□□□□ -1.36
PSMB3-212ENST00000620309 PTGFRNQ9P2B2 879 aa6.56□□□□□ -1.36
PSMB3-212ENST00000620309 ZNF223Q9UK11 482 aaPredicted RBP6.56□□□□□ -1.36
PSMB3-212ENST00000620309 VPS4AQ9UN37 437 aa6.56□□□□□ -1.36
PSMB3-212ENST00000620309 ERVK-19Q9WJR5 959 aa6.56□□□□□ -1.36
PSMB3-212ENST00000620309 PCDHB14Q9Y5E9 798 aa6.56□□□□□ -1.36
PSMB3-212ENST00000620309 IGHV3-20A0A0C4DH32 117 aa6.55□□□□□ -1.36
PSMB3-212ENST00000620309 NME4O00746 187 aa6.55□□□□□ -1.36
PSMB3-212ENST00000620309 PRAMEF2O60811 474 aa6.55□□□□□ -1.36
PSMB3-212ENST00000620309 COQ9O75208 318 aa6.55□□□□□ -1.36
PSMB3-212ENST00000620309 CPSF4O95639 269 aaKnown RBP6.55□□□□□ -1.36
PSMB3-212ENST00000620309 GSNP06396 782 aa6.55□□□□□ -1.36
PSMB3-212ENST00000620309 BMP2P12643 396 aa6.55□□□□□ -1.36
PSMB3-212ENST00000620309 UQCRC2P22695 453 aa6.55□□□□□ -1.36
PSMB3-212ENST00000620309 SSTR4P31391 388 aa6.55□□□□□ -1.36
PSMB3-212ENST00000620309 GPC1P35052 558 aa6.55□□□□□ -1.36
PSMB3-212ENST00000620309 MAP3K8P41279 467 aa6.55□□□□□ -1.36
PSMB3-212ENST00000620309 MAN2A2P49641 1150 aa6.55□□□□□ -1.36
PSMB3-212ENST00000620309 GPR143P51810 404 aa6.55□□□□□ -1.36
PSMB3-212ENST00000620309 MNAT1P51948 309 aa6.55□□□□□ -1.36
PSMB3-212ENST00000620309 SLC7A2P52569 658 aa6.55□□□□□ -1.36
PSMB3-212ENST00000620309 SLC37A1P57057 533 aa6.55□□□□□ -1.36
PSMB3-212ENST00000620309 SLC26A5P58743 744 aa6.55□□□□□ -1.36
PSMB3-212ENST00000620309 RPS26P62854 115 aaKnown RBP6.55□□□□□ -1.36
PSMB3-212ENST00000620309 SLC25A3Q00325 362 aa6.55□□□□□ -1.36
PSMB3-212ENST00000620309 FUT5Q11128 374 aa6.55□□□□□ -1.36
PSMB3-212ENST00000620309 EXOSC7Q15024 291 aaKnown RBP6.55□□□□□ -1.36
PSMB3-212ENST00000620309 EBPQ15125 230 aaKnown RBP6.55□□□□□ -1.36
PSMB3-212ENST00000620309 RABL3Q5HYI8 236 aa6.55□□□□□ -1.36
PSMB3-212ENST00000620309 B3GNTL1Q67FW5 361 aaPredicted RBP6.55□□□□□ -1.36
PSMB3-212ENST00000620309 MFSD12Q6NUT3 480 aa6.55□□□□□ -1.36
PSMB3-212ENST00000620309 RINLQ6ZS11 566 aa6.55□□□□□ -1.36
PSMB3-212ENST00000620309 ASRGL1Q7L266 308 aa6.55□□□□□ -1.36
PSMB3-212ENST00000620309 SLC29A4Q7RTT9 530 aa6.55□□□□□ -1.36
PSMB3-212ENST00000620309 ATCAYQ86WG3 371 aa6.55□□□□□ -1.36
PSMB3-212ENST00000620309 C9orf40Q8IXQ3 194 aa6.55□□□□□ -1.36
PSMB3-212ENST00000620309 SIRT6Q8N6T7 355 aa6.55□□□□□ -1.36
PSMB3-212ENST00000620309 TRIML2Q8N7C3 387 aa6.55□□□□□ -1.36
PSMB3-212ENST00000620309 ZNF321PQ8N8H1 164 aa6.55□□□□□ -1.36
PSMB3-212ENST00000620309 ZNF615Q8N8J6 731 aa6.55□□□□□ -1.36
PSMB3-212ENST00000620309 TMEM178AQ8NBL3 297 aa6.55□□□□□ -1.36
PSMB3-212ENST00000620309 APCDD1LQ8NCL9 501 aa6.55□□□□□ -1.36
PSMB3-212ENST00000620309 MORN4Q8NDC4 146 aa6.55□□□□□ -1.36
PSMB3-212ENST00000620309 B3GNT7Q8NFL0 401 aa6.55□□□□□ -1.36
PSMB3-212ENST00000620309 OR5L2Q8NGL0 311 aa6.55□□□□□ -1.36
PSMB3-212ENST00000620309 SLC22A8Q8TCC7 542 aa6.55□□□□□ -1.36
PSMB3-212ENST00000620309 MIPOL1Q8TD10 442 aa6.55□□□□□ -1.36
PSMB3-212ENST00000620309 ZNF721Q8TF20 911 aa6.55□□□□□ -1.36
PSMB3-212ENST00000620309 RIT1Q92963 219 aa6.55□□□□□ -1.36
PSMB3-212ENST00000620309 PNPLA2Q96AD5 504 aa6.55□□□□□ -1.36
PSMB3-212ENST00000620309 TMEM125Q96AQ2 219 aa6.55□□□□□ -1.36
PSMB3-212ENST00000620309 PPWD1Q96BP3 646 aaKnown RBP6.55□□□□□ -1.36
PSMB3-212ENST00000620309 SLC35G5Q96KT7 338 aa6.55□□□□□ -1.36
PSMB3-212ENST00000620309 C5orf34Q96MH7 638 aa6.55□□□□□ -1.36
PSMB3-212ENST00000620309 VSTM2LQ96N03 204 aa6.55□□□□□ -1.36
PSMB3-212ENST00000620309 UTP23Q9BRU9 249 aaKnown RBP6.55□□□□□ -1.36
PSMB3-212ENST00000620309 CNPPD1Q9BV87 410 aa6.55□□□□□ -1.36
PSMB3-212ENST00000620309 RNF32Q9H0A6 362 aa6.55□□□□□ -1.36
PSMB3-212ENST00000620309 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.55□□□□□ -1.36
PSMB3-212ENST00000620309 ANKRA2Q9H9E1 313 aa6.55□□□□□ -1.36
PSMB3-212ENST00000620309 EFCAB1Q9HAE3 211 aa6.55□□□□□ -1.36
PSMB3-212ENST00000620309 TPT1P8Q9HAU6 139 aa6.55□□□□□ -1.36
PSMB3-212ENST00000620309 IL1RL2Q9HB29 575 aa6.55□□□□□ -1.36
PSMB3-212ENST00000620309 SPAG4Q9NPE6 437 aa6.55□□□□□ -1.36
PSMB3-212ENST00000620309 AGPAT4Q9NRZ5 378 aa6.55□□□□□ -1.36
PSMB3-212ENST00000620309 NDE1Q9NXR1 346 aa6.55□□□□□ -1.36
PSMB3-212ENST00000620309 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.55□□□□□ -1.36
PSMB3-212ENST00000620309 C19orf53Q9UNZ5 99 aaPredicted RBP6.55□□□□□ -1.36
PSMB3-212ENST00000620309 CFL2Q9Y281 166 aa6.55□□□□□ -1.36
PSMB3-212ENST00000620309 B3GNT3Q9Y2A9 372 aa6.55□□□□□ -1.36
PSMB3-212ENST00000620309 DTX4Q9Y2E6 619 aa6.55□□□□□ -1.36
PSMB3-212ENST00000620309 HEATR5AQ86XA9 2040 aa6.54□□□□□ -1.36
PSMB3-212ENST00000620309 TRAV17A0A0B4J275 112 aa6.54□□□□□ -1.36
PSMB3-212ENST00000620309 TRBV11-1A0A0K0K1C0 115 aa6.54□□□□□ -1.36
PSMB3-212ENST00000620309 OR6C76A6NM76 312 aa6.54□□□□□ -1.36
PSMB3-212ENST00000620309 TTLL8A6PVC2 850 aa6.54□□□□□ -1.36
PSMB3-212ENST00000620309 A8MUI8 341 aa6.54□□□□□ -1.36
PSMB3-212ENST00000620309 EMC8O43402 210 aa6.54□□□□□ -1.36
PSMB3-212ENST00000620309 ASNA1O43681 348 aa6.54□□□□□ -1.36
PSMB3-212ENST00000620309 ZFAND5O76080 213 aa6.54□□□□□ -1.36
PSMB3-212ENST00000620309 ANP32DO95626 131 aa6.54□□□□□ -1.36
PSMB3-212ENST00000620309 HMGN2P05204 90 aaKnown RBP6.54□□□□□ -1.36
PSMB3-212ENST00000620309 KRT16P08779 473 aa6.54□□□□□ -1.36
PSMB3-212ENST00000620309 ACP2P11117 423 aa6.54□□□□□ -1.36
PSMB3-212ENST00000620309 CD46P15529 392 aa6.54□□□□□ -1.36
PSMB3-212ENST00000620309 GPX2P18283 190 aa6.54□□□□□ -1.36
PSMB3-212ENST00000620309 PPIBP23284 216 aaKnown RBP6.54□□□□□ -1.36
PSMB3-212ENST00000620309 MAGEA8P43361 318 aa6.54□□□□□ -1.36
PSMB3-212ENST00000620309 CCT3P49368 545 aaKnown RBP6.54□□□□□ -1.36
PSMB3-212ENST00000620309 TMED10P49755 219 aaKnown RBP6.54□□□□□ -1.36
PSMB3-212ENST00000620309 KHKP50053 298 aa6.54□□□□□ -1.36
PSMB3-212ENST00000620309 EMDP50402 254 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms