RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 HLA-CQ95604 372 aa14.34□□□□□ -0.11
COL5A1-208ENST00000618395 TIMM29Q9BSF4 260 aa14.34□□□□□ -0.11
COL5A1-208ENST00000618395 MIA3Q5JRA6 1907 aa14.34□□□□□ -0.11
COL5A1-208ENST00000618395 ZNF791Q3KP31 576 aaPredicted RBP14.34□□□□□ -0.11
COL5A1-208ENST00000618395 FAM205BPQ63HN1 556 aa14.34□□□□□ -0.11
COL5A1-208ENST00000618395 CERKQ8TCT0 537 aa14.34□□□□□ -0.11
COL5A1-208ENST00000618395 DNAJC19Q96DA6 116 aa14.34□□□□□ -0.11
COL5A1-208ENST00000618395 HOXC6P09630 235 aa14.34□□□□□ -0.11
COL5A1-208ENST00000618395 TNFSF8P32971 234 aa14.34□□□□□ -0.11
COL5A1-208ENST00000618395 SORDQ00796 357 aa14.34□□□□□ -0.11
COL5A1-208ENST00000618395 NUDT13Q86X67 352 aa14.34□□□□□ -0.11
COL5A1-208ENST00000618395 TRMT61BQ9BVS5 477 aaKnown RBP14.34□□□□□ -0.11
COL5A1-208ENST00000618395 KPTNQ9Y664 436 aa14.34□□□□□ -0.11
COL5A1-208ENST00000618395 NSA2O95478 260 aaKnown RBP14.33□□□□□ -0.11
COL5A1-208ENST00000618395 KCNJ5P48544 419 aa14.33□□□□□ -0.11
COL5A1-208ENST00000618395 ARL6IP1Q15041 203 aa14.33□□□□□ -0.11
COL5A1-208ENST00000618395 SYNPRQ8TBG9 265 aa14.33□□□□□ -0.11
COL5A1-208ENST00000618395 BABAM2Q9NXR7 383 aa14.33□□□□□ -0.11
COL5A1-208ENST00000618395 PLAG1Q6DJT9 500 aa14.33□□□□□ -0.11
COL5A1-208ENST00000618395 VASNQ6EMK4 673 aa14.33□□□□□ -0.11
COL5A1-208ENST00000618395 SERPINA9Q86WD7 417 aa14.33□□□□□ -0.11
COL5A1-208ENST00000618395 SUN3Q8TAQ9 357 aa14.33□□□□□ -0.11
COL5A1-208ENST00000618395 TFAP2CQ92754 450 aa14.33□□□□□ -0.11
COL5A1-208ENST00000618395 INTS14Q96SY0 518 aa14.33□□□□□ -0.11
COL5A1-208ENST00000618395 C20orf24Q9BUV8 137 aa14.33□□□□□ -0.11
COL5A1-208ENST00000618395 ZNF395Q9H8N7 513 aaPredicted RBP14.33□□□□□ -0.11
COL5A1-208ENST00000618395 CNTNAP4Q9C0A0 1308 aa14.33□□□□□ -0.12
COL5A1-208ENST00000618395 LRIT2A6NDA9 550 aa14.33□□□□□ -0.12
COL5A1-208ENST00000618395 FCER1GP30273 86 aa14.33□□□□□ -0.12
COL5A1-208ENST00000618395 SPANXN4Q5MJ08 99 aa14.33□□□□□ -0.12
COL5A1-208ENST00000618395 FAM124AQ86V42 546 aa14.33□□□□□ -0.12
COL5A1-208ENST00000618395 ZNF611Q8N823 705 aa14.33□□□□□ -0.12
COL5A1-208ENST00000618395 B3GAT2Q9NPZ5 323 aa14.33□□□□□ -0.12
COL5A1-208ENST00000618395 ARL2-SNX15V9GYD0 113 aa14.33□□□□□ -0.12
COL5A1-208ENST00000618395 TRAF3IP2O43734 574 aaPredicted RBP14.33□□□□□ -0.12
COL5A1-208ENST00000618395 GPR137BO60478 399 aa14.33□□□□□ -0.12
COL5A1-208ENST00000618395 TMEM127O75204 238 aa14.33□□□□□ -0.12
COL5A1-208ENST00000618395 KCNQ1P51787 676 aa14.33□□□□□ -0.12
COL5A1-208ENST00000618395 CRYZQ08257 329 aaKnown RBP14.33□□□□□ -0.12
COL5A1-208ENST00000618395 KCNJ11Q14654 390 aa14.33□□□□□ -0.12
COL5A1-208ENST00000618395 ZNF239Q16600 458 aaKnown RBP14.33□□□□□ -0.12
COL5A1-208ENST00000618395 TEX26Q8N6G2 289 aa14.33□□□□□ -0.12
COL5A1-208ENST00000618395 SPPL2BQ8TCT7 592 aa14.33□□□□□ -0.12
COL5A1-208ENST00000618395 MRPL22Q9NWU5 206 aaKnown RBP14.33□□□□□ -0.12
COL5A1-208ENST00000618395 SARDHQ9UL12 918 aa14.33□□□□□ -0.12
COL5A1-208ENST00000618395 DISP2A7MBM2 1401 aa14.33□□□□□ -0.12
COL5A1-208ENST00000618395 JRKO75564 520 aa14.33□□□□□ -0.12
COL5A1-208ENST00000618395 CBSLP0DN79 551 aa14.33□□□□□ -0.12
COL5A1-208ENST00000618395 PTAFRP25105 342 aa14.33□□□□□ -0.12
COL5A1-208ENST00000618395 CBSP35520 551 aa14.33□□□□□ -0.12
COL5A1-208ENST00000618395 TAS2R19P59542 299 aa14.33□□□□□ -0.12
COL5A1-208ENST00000618395 METTL7BQ6UX53 244 aa14.33□□□□□ -0.12
COL5A1-208ENST00000618395 GPR142Q7Z601 462 aa14.33□□□□□ -0.12
COL5A1-208ENST00000618395 SULF2Q8IWU5 870 aa14.33□□□□□ -0.12
COL5A1-208ENST00000618395 KLHDC8BQ8IXV7 354 aa14.33□□□□□ -0.12
COL5A1-208ENST00000618395 GGHQ92820 318 aa14.33□□□□□ -0.12
COL5A1-208ENST00000618395 PTPN18Q99952 460 aa14.33□□□□□ -0.12
COL5A1-208ENST00000618395 LTKP29376 864 aa14.33□□□□□ -0.12
COL5A1-208ENST00000618395 ACTBL2Q562R1 376 aa14.33□□□□□ -0.12
COL5A1-208ENST00000618395 TMEM173Q86WV6 379 aaPredicted RBP14.33□□□□□ -0.12
COL5A1-208ENST00000618395 CLTCQ00610 1675 aaKnown RBP14.33□□□□□ -0.12
COL5A1-208ENST00000618395 TISP43B9A030 160 aa14.33□□□□□ -0.12
COL5A1-208ENST00000618395 GABRDO14764 452 aa14.33□□□□□ -0.12
COL5A1-208ENST00000618395 TYROBPO43914 113 aa14.33□□□□□ -0.12
COL5A1-208ENST00000618395 WSCD1Q658N2 575 aa14.33□□□□□ -0.12
COL5A1-208ENST00000618395 LCLAT1Q6UWP7 414 aa14.33□□□□□ -0.12
COL5A1-208ENST00000618395 HACD2Q6Y1H2 254 aa14.33□□□□□ -0.12
COL5A1-208ENST00000618395 NPAS4Q8IUM7 802 aa14.33□□□□□ -0.12
COL5A1-208ENST00000618395 ARRDC4Q8NCT1 418 aa14.33□□□□□ -0.12
COL5A1-208ENST00000618395 IL17RDQ8NFM7 739 aa14.33□□□□□ -0.12
COL5A1-208ENST00000618395 IL12RB2Q99665 862 aa14.33□□□□□ -0.12
COL5A1-208ENST00000618395 SRRQ9GZT4 340 aa14.33□□□□□ -0.12
COL5A1-208ENST00000618395 NEMP2A6NFY4 417 aa14.32□□□□□ -0.12
COL5A1-208ENST00000618395 YDJCA8MPS7 323 aa14.32□□□□□ -0.12
COL5A1-208ENST00000618395 DLX3O60479 287 aa14.32□□□□□ -0.12
COL5A1-208ENST00000618395 RIDAP52758 137 aaKnown RBP14.32□□□□□ -0.12
COL5A1-208ENST00000618395 KIAA1024LP59773 190 aa14.32□□□□□ -0.12
COL5A1-208ENST00000618395 RAB1AP62820 205 aa14.32□□□□□ -0.12
COL5A1-208ENST00000618395 UBXN2BQ14CS0 331 aa14.32□□□□□ -0.12
COL5A1-208ENST00000618395 GPR135Q8IZ08 494 aa14.32□□□□□ -0.12
COL5A1-208ENST00000618395 UBAC2Q8NBM4 344 aa14.32□□□□□ -0.12
COL5A1-208ENST00000618395 ZFAND1Q8TCF1 268 aa14.32□□□□□ -0.12
COL5A1-208ENST00000618395 HAS1Q92839 578 aa14.32□□□□□ -0.12
COL5A1-208ENST00000618395 KATNB1Q9BVA0 655 aa14.32□□□□□ -0.12
COL5A1-208ENST00000618395 MATN3O15232 486 aa14.32□□□□□ -0.12
COL5A1-208ENST00000618395 DPM1O60762 260 aa14.32□□□□□ -0.12
COL5A1-208ENST00000618395 PFKMP08237 780 aa14.32□□□□□ -0.12
COL5A1-208ENST00000618395 SLC5A2P31639 672 aa14.32□□□□□ -0.12
COL5A1-208ENST00000618395 C15orf54Q8N8G6 183 aa14.32□□□□□ -0.12
COL5A1-208ENST00000618395 NETO2Q8NC67 525 aa14.32□□□□□ -0.12
COL5A1-208ENST00000618395 UTS2RQ9UKP6 389 aa14.32□□□□□ -0.12
COL5A1-208ENST00000618395 CXorf49A8MYA2 514 aaPredicted RBP14.32□□□□□ -0.12
COL5A1-208ENST00000618395 PRPH2P23942 346 aa14.32□□□□□ -0.12
COL5A1-208ENST00000618395 KLRC2P26717 231 aa14.32□□□□□ -0.12
COL5A1-208ENST00000618395 GLUD2P49448 558 aa14.32□□□□□ -0.12
COL5A1-208ENST00000618395 EBPQ15125 230 aaKnown RBP14.32□□□□□ -0.12
COL5A1-208ENST00000618395 FAM182BQ5T319 152 aa14.32□□□□□ -0.12
COL5A1-208ENST00000618395 TMEM88Q6PEY1 159 aa14.32□□□□□ -0.12
COL5A1-208ENST00000618395 MFSD6LQ8IWD5 586 aa14.32□□□□□ -0.12
COL5A1-208ENST00000618395 DNERQ8NFT8 737 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms