RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 APOBEC4Q8WW27 367 aaKnown RBP7.28□□□□□ -1.24
NEK3-207ENST00000617054 ZDHHC12Q96GR4 267 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 ZNF607Q96SK3 696 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 PIP5K1AQ99755 562 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 ACTRT3Q9BYD9 372 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 ALOXE3Q9BYJ1 711 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 ROGDIQ9GZN7 287 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 PCED1AQ9H1Q7 454 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 LYRM4Q9HD34 91 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 MS4A12Q9NXJ0 267 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 IFT80Q9P2H3 777 aaPredicted RBP7.28□□□□□ -1.24
NEK3-207ENST00000617054 ORC6Q9Y5N6 252 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 GPC6Q9Y625 555 aaPredicted RBP7.28□□□□□ -1.24
NEK3-207ENST00000617054 ENPP4Q9Y6X5 453 aa7.28□□□□□ -1.24
NEK3-207ENST00000617054 PEX12O00623 359 aa7.27□□□□□ -1.25
NEK3-207ENST00000617054 BCKDKO14874 412 aa7.27□□□□□ -1.25
NEK3-207ENST00000617054 SIGLEC6O43699 453 aa7.27□□□□□ -1.25
NEK3-207ENST00000617054 BCAS1O75363 584 aaPredicted RBP7.27□□□□□ -1.25
NEK3-207ENST00000617054 SOX14O95416 240 aa7.27□□□□□ -1.25
NEK3-207ENST00000617054 GLB1P16278 677 aa7.27□□□□□ -1.25
NEK3-207ENST00000617054 DDX5P17844 614 aaKnown RBP7.27□□□□□ -1.25
NEK3-207ENST00000617054 ARFIP1P53367 373 aa7.27□□□□□ -1.25
NEK3-207ENST00000617054 DUSP8Q13202 625 aa7.27□□□□□ -1.25
NEK3-207ENST00000617054 MAPK14Q16539 360 aa7.27□□□□□ -1.25
NEK3-207ENST00000617054 TCEAL6Q6IPX3 200 aa7.27□□□□□ -1.25
NEK3-207ENST00000617054 BHLHB9Q6PI77 547 aa7.27□□□□□ -1.25
NEK3-207ENST00000617054 TMEM64Q6YI46 380 aa7.27□□□□□ -1.25
NEK3-207ENST00000617054 ZNF574Q6ZN55 896 aaPredicted RBP7.27□□□□□ -1.25
NEK3-207ENST00000617054 C8orf59Q8N0T1 100 aaPredicted RBP7.27□□□□□ -1.25
NEK3-207ENST00000617054 OR2L13Q8N349 312 aa7.27□□□□□ -1.25
NEK3-207ENST00000617054 LILRB2Q8N423 598 aa7.27□□□□□ -1.25
NEK3-207ENST00000617054 TMEM105Q8N8V8 129 aa7.27□□□□□ -1.25
NEK3-207ENST00000617054 OR51Q1Q8NH59 317 aa7.27□□□□□ -1.25
NEK3-207ENST00000617054 OR1L3Q8NH93 324 aa7.27□□□□□ -1.25
NEK3-207ENST00000617054 TCEAL3Q969E4 200 aa7.27□□□□□ -1.25
NEK3-207ENST00000617054 RBM18Q96H35 190 aaKnown RBP7.27□□□□□ -1.25
NEK3-207ENST00000617054 ZNF764Q96H86 408 aaPredicted RBP7.27□□□□□ -1.25
NEK3-207ENST00000617054 ZNF354BQ96LW1 612 aa7.27□□□□□ -1.25
NEK3-207ENST00000617054 ALPK1Q96QP1 1244 aa7.27□□□□□ -1.25
NEK3-207ENST00000617054 GTPBP2Q9BX10 602 aaKnown RBP7.27□□□□□ -1.25
NEK3-207ENST00000617054 FAM86C1Q9NVL1 165 aa7.27□□□□□ -1.25
NEK3-207ENST00000617054 MAT2BQ9NZL9 334 aa7.27□□□□□ -1.25
NEK3-207ENST00000617054 GMEB2Q9UKD1 530 aa7.27□□□□□ -1.25
NEK3-207ENST00000617054 PILRBQ9UKJ0 227 aa7.27□□□□□ -1.25
NEK3-207ENST00000617054 SPACA6W5XKT8 324 aa7.27□□□□□ -1.25
NEK3-207ENST00000617054 CPSF4LA6NMK7 179 aaKnown RBP7.27□□□□□ -1.25
NEK3-207ENST00000617054 NUDT21O43809 227 aaKnown RBP7.27□□□□□ -1.25
NEK3-207ENST00000617054 SRPX2O60687 465 aaPredicted RBP7.27□□□□□ -1.25
NEK3-207ENST00000617054 SERPINB7O75635 380 aa7.27□□□□□ -1.25
NEK3-207ENST00000617054 IFNA16P05015 189 aa7.27□□□□□ -1.25
NEK3-207ENST00000617054 GKN3PP0CG01 181 aa7.27□□□□□ -1.25
NEK3-207ENST00000617054 GNSP15586 552 aa7.27□□□□□ -1.25
NEK3-207ENST00000617054 GABRA3P34903 492 aa7.27□□□□□ -1.25
NEK3-207ENST00000617054 EFNA3P52797 238 aa7.27□□□□□ -1.25
NEK3-207ENST00000617054 RAB38P57729 211 aa7.27□□□□□ -1.25
NEK3-207ENST00000617054 ISL1P61371 349 aa7.27□□□□□ -1.25
NEK3-207ENST00000617054 RPP38P78345 283 aaKnown RBP7.27□□□□□ -1.25
NEK3-207ENST00000617054 MGAT2Q10469 447 aa7.27□□□□□ -1.25
NEK3-207ENST00000617054 DBPQ10586 325 aaPredicted RBP7.27□□□□□ -1.25
NEK3-207ENST00000617054 ZNF267Q14586 743 aaPredicted RBP7.27□□□□□ -1.25
NEK3-207ENST00000617054 NEDD8Q15843 81 aa7.27□□□□□ -1.25
NEK3-207ENST00000617054 MICAQ29983 383 aa7.27□□□□□ -1.25
NEK3-207ENST00000617054 MINDY4Q4G0A6 757 aa7.27□□□□□ -1.25
NEK3-207ENST00000617054 RBM44Q6ZP01 1051 aaKnown RBP7.27□□□□□ -1.25
NEK3-207ENST00000617054 THAP5Q7Z6K1 395 aa7.27□□□□□ -1.25
NEK3-207ENST00000617054 LAPTM4BQ86VI4 370 aa7.27□□□□□ -1.25
NEK3-207ENST00000617054 TAGAPQ8N103 731 aa7.27□□□□□ -1.25
NEK3-207ENST00000617054 ZNF614Q8N883 585 aa7.27□□□□□ -1.25
NEK3-207ENST00000617054 ZNF321PQ8N8H1 164 aa7.27□□□□□ -1.25
NEK3-207ENST00000617054 AQP11Q8NBQ7 271 aa7.27□□□□□ -1.25
NEK3-207ENST00000617054 SLC7A13Q8TCU3 470 aa7.27□□□□□ -1.25
NEK3-207ENST00000617054 NMD3Q96D46 503 aaKnown RBP7.27□□□□□ -1.25
NEK3-207ENST00000617054 CNPPD1Q9BV87 410 aa7.27□□□□□ -1.25
NEK3-207ENST00000617054 USE1Q9NZ43 259 aa7.27□□□□□ -1.25
NEK3-207ENST00000617054 PLCL2Q9UPR0 1127 aa7.27□□□□□ -1.25
NEK3-207ENST00000617054 H0YAE9 185 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 ADAMDEC1O15204 470 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 TRHRP34981 398 aaPredicted RBP7.26□□□□□ -1.25
NEK3-207ENST00000617054 IDH2P48735 452 aaKnown RBP7.26□□□□□ -1.25
NEK3-207ENST00000617054 RAD23AP54725 363 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 SIGLEC14Q08ET2 396 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 NPRL3Q12980 569 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 FAM69BQ5VUD6 431 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 FAAH2Q6GMR7 532 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 CDC73Q6P1J9 531 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 ARHGAP22Q7Z5H3 698 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 PARP8Q8N3A8 854 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 FAM169BQ8N8A8 192 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 OR4C15Q8NGM1 316 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 EPYCQ99645 322 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 LIN28AQ9H9Z2 209 aaKnown RBP7.26□□□□□ -1.25
NEK3-207ENST00000617054 NECTIN3Q9NQS3 549 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 KCNE5Q9UJ90 142 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 GMPPBQ9Y5P6 360 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 EP300Q09472 2414 aaPredicted RBP7.26□□□□□ -1.25
NEK3-207ENST00000617054 SYNDIG1LA6NDD5 238 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 OR10H3O60404 316 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 CBX7O95931 251 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 HPRP00739 348 aa7.26□□□□□ -1.25
NEK3-207ENST00000617054 ATP1B1P05026 303 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms