RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 TRBV11-1A0A0K0K1C0 115 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 C20orf202A1L168 122 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 ABCD4O14678 606 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 GIFP27352 417 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 TAS2R30P59541 319 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 KCNJ11Q14654 390 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 HRASLS5Q96KN8 279 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 TRAPPC2LQ9UL33 140 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 LHX6Q9UPM6 363 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 MYBPHLA2RUH7 354 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 IGLON5A6NGN9 336 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 ZNF254O75437 659 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 TGDSO95455 350 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 CSF2RAP15509 400 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 KDELR2P33947 212 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 CRYZQ08257 329 aaKnown RBP12.04□□□□□ -0.48
TCF4-248ENST00000616053 UBE2NLQ5JXB2 153 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 LRRC25Q8N386 305 aaPredicted RBP12.04□□□□□ -0.48
TCF4-248ENST00000616053 APH1AQ96BI3 265 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 RNF170Q96K19 258 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 MRPS2Q9Y399 296 aaKnown RBP12.04□□□□□ -0.48
TCF4-248ENST00000616053 B4DXG7 233 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 ADAM23O75077 832 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 PIAS1O75925 651 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 SOX14O95416 240 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 PRDX6P30041 224 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 EFNA3P52797 238 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 RAB11AP62491 216 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 TMEM115Q12893 351 aaPredicted RBP12.04□□□□□ -0.48
TCF4-248ENST00000616053 FSTL4Q6MZW2 842 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 MOB3CQ70IA8 216 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 ZFP82Q8N141 532 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 ST6GALNAC5Q9BVH7 336 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 RHBDD3Q9Y3P4 386 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 SOWAHBA6NEL2 793 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 MAS1P04201 325 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 PORP16435 677 aaPredicted RBP12.04□□□□□ -0.48
TCF4-248ENST00000616053 CAMK2BQ13554 666 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 COL9A2Q14055 689 aaPredicted RBP12.04□□□□□ -0.48
TCF4-248ENST00000616053 ZNF169Q14929 603 aaPredicted RBP12.04□□□□□ -0.48
TCF4-248ENST00000616053 TATDN3Q17R31 274 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 ALYREFQ86V81 257 aaKnown RBP12.04□□□□□ -0.48
TCF4-248ENST00000616053 TP53INP2Q8IXH6 220 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 AGBL5Q8NDL9 886 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 NTAN1Q96AB6 310 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 KLRG1Q96E93 195 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 SERINC2Q96SA4 455 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 GPR22Q99680 433 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 NMES1Q9C002 83 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 TTC37Q6PGP7 1564 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 DNASE1P24855 282 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 LILRA4P59901 499 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 UGT8Q16880 541 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 ZNF529Q6P280 563 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 INTS5Q6P9B9 1019 aaKnown RBP12.04□□□□□ -0.48
TCF4-248ENST00000616053 OR51A7Q8NH64 312 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 TCTN2Q96GX1 697 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 NDFIP1Q9BT67 221 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 POTEKPQ9BYX7 375 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 PRELID3BQ9Y3B1 194 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 A0A1W2PPK0 400 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 GCGRP47871 477 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 TDGQ13569 410 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 RUNX3Q13761 415 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 ZNF805Q5CZA5 627 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 CREB3L4Q8TEY5 395 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 SGTBQ96EQ0 304 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 SLC2A11Q9BYW1 496 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 RETREG1Q9H6L5 497 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 TMED5Q9Y3A6 229 aa12.04□□□□□ -0.48
TCF4-248ENST00000616053 TUSC2O75896 110 aa12.03□□□□□ -0.48
TCF4-248ENST00000616053 DAP3P51398 398 aaKnown RBP12.03□□□□□ -0.48
TCF4-248ENST00000616053 KCNJ8Q15842 424 aa12.03□□□□□ -0.48
TCF4-248ENST00000616053 F6UZH7 168 aa12.03□□□□□ -0.48
TCF4-248ENST00000616053 RAB27BO00194 218 aa12.03□□□□□ -0.48
TCF4-248ENST00000616053 SOX30O94993 753 aa12.03□□□□□ -0.48
TCF4-248ENST00000616053 IL10RAQ13651 578 aa12.03□□□□□ -0.48
TCF4-248ENST00000616053 HNRNPDQ14103 355 aaKnown RBP12.03□□□□□ -0.48
TCF4-248ENST00000616053 CTSL3PQ5NE16 218 aa12.03□□□□□ -0.48
TCF4-248ENST00000616053 ARRDC3Q96B67 414 aa12.03□□□□□ -0.48
TCF4-248ENST00000616053 MRPL38Q96DV4 380 aaKnown RBP12.03□□□□□ -0.48
TCF4-248ENST00000616053 UHRF2Q96PU4 802 aa12.03□□□□□ -0.48
TCF4-248ENST00000616053 OR6C70A6NIJ9 312 aa12.03□□□□□ -0.48
TCF4-248ENST00000616053 PHYHO14832 338 aa12.03□□□□□ -0.48
TCF4-248ENST00000616053 HNRNPA1P09651 372 aaKnown RBP eCLIP12.03□□□□□ -0.48
TCF4-248ENST00000616053 NPY5RQ15761 445 aa12.03□□□□□ -0.48
TCF4-248ENST00000616053 DEFB110Q30KQ9 67 aa12.03□□□□□ -0.48
TCF4-248ENST00000616053 FAM111BQ6SJ93 734 aa12.03□□□□□ -0.48
TCF4-248ENST00000616053 OR51G2Q8NGK0 314 aa12.03□□□□□ -0.48
TCF4-248ENST00000616053 SORCS2Q96PQ0 1159 aa12.03□□□□□ -0.48
TCF4-248ENST00000616053 AMBNQ9NP70 447 aa12.03□□□□□ -0.48
TCF4-248ENST00000616053 SRPK3Q9UPE1 567 aa12.03□□□□□ -0.48
TCF4-248ENST00000616053 ZDHHC9Q9Y397 364 aa12.03□□□□□ -0.48
TCF4-248ENST00000616053 NCBP2LA6PVI3 153 aaKnown RBP12.03□□□□□ -0.48
TCF4-248ENST00000616053 DFNA5O60443 496 aa12.03□□□□□ -0.48
TCF4-248ENST00000616053 FMO6PO60774 539 aa12.03□□□□□ -0.48
TCF4-248ENST00000616053 ACPPP15309 386 aa12.03□□□□□ -0.48
TCF4-248ENST00000616053 GALEQ14376 348 aa12.03□□□□□ -0.48
TCF4-248ENST00000616053 PPM1JQ5JR12 505 aa12.03□□□□□ -0.48
TCF4-248ENST00000616053 GDPD3Q7L5L3 318 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms