RNA–Protein interactions for RNA: ENST00000615065.1

PRKN-211, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-211ENST00000615065 HRNRQ86YZ3 2850 aaPredicted RBP13.49□□□□□ -0.25
PRKN-211ENST00000615065 SERTM1A2A2V5 107 aa13.48□□□□□ -0.25
PRKN-211ENST00000615065 CCDC151A5D8V7 595 aa13.48□□□□□ -0.25
PRKN-211ENST00000615065 MBD3L4A6NDZ8 208 aaPredicted RBP13.48□□□□□ -0.25
PRKN-211ENST00000615065 MBD3L3A6NE82 208 aaPredicted RBP13.48□□□□□ -0.25
PRKN-211ENST00000615065 MBD3L5A6NJ08 208 aaPredicted RBP13.48□□□□□ -0.25
PRKN-211ENST00000615065 TSPAN2O60636 221 aa13.48□□□□□ -0.25
PRKN-211ENST00000615065 GLRA3O75311 464 aa13.48□□□□□ -0.25
PRKN-211ENST00000615065 CTAG2O75638 210 aa13.48□□□□□ -0.25
PRKN-211ENST00000615065 CBR3O75828 277 aa13.48□□□□□ -0.25
PRKN-211ENST00000615065 BCAS2O75934 225 aaPredicted RBP13.48□□□□□ -0.25
PRKN-211ENST00000615065 ACTL6AO96019 429 aa13.48□□□□□ -0.25
PRKN-211ENST00000615065 SHBGP04278 402 aa13.48□□□□□ -0.25
PRKN-211ENST00000615065 MYL2P10916 166 aa13.48□□□□□ -0.25
PRKN-211ENST00000615065 DNAJA1P31689 397 aaKnown RBP13.48□□□□□ -0.25
PRKN-211ENST00000615065 AGFG1P52594 562 aaKnown RBP13.48□□□□□ -0.25
PRKN-211ENST00000615065 SF3B4Q15427 424 aaKnown RBP eCLIP13.48□□□□□ -0.25
PRKN-211ENST00000615065 FBXL19-AS1Q494R0 122 aa13.48□□□□□ -0.25
PRKN-211ENST00000615065 SPDYAQ5MJ70 313 aa13.48□□□□□ -0.25
PRKN-211ENST00000615065 SH2D5Q6ZV89 423 aa13.48□□□□□ -0.25
PRKN-211ENST00000615065 FAM9CQ8IZT9 166 aa13.48□□□□□ -0.25
PRKN-211ENST00000615065 C9orf106Q8NAJ2 232 aa13.48□□□□□ -0.25
PRKN-211ENST00000615065 OR14L1PQ8NHC6 308 aa13.48□□□□□ -0.25
PRKN-211ENST00000615065 MBD3L2Q8NHZ7 208 aaPredicted RBP13.48□□□□□ -0.25
PRKN-211ENST00000615065 RNASE6Q93091 150 aaKnown RBP13.48□□□□□ -0.25
PRKN-211ENST00000615065 TMCO6Q96DC7 493 aa13.48□□□□□ -0.25
PRKN-211ENST00000615065 SLC35A4Q96G79 324 aa13.48□□□□□ -0.25
PRKN-211ENST00000615065 BBS4Q96RK4 519 aa13.48□□□□□ -0.25
PRKN-211ENST00000615065 GPATCH1Q9BRR8 931 aaKnown RBP13.48□□□□□ -0.25
PRKN-211ENST00000615065 TNFRSF12AQ9NP84 129 aa13.48□□□□□ -0.25
PRKN-211ENST00000615065 SIRT5Q9NXA8 310 aa13.48□□□□□ -0.25
PRKN-211ENST00000615065 DNAJB12Q9NXW2 375 aaKnown RBP13.48□□□□□ -0.25
PRKN-211ENST00000615065 SENP1Q9P0U3 644 aa13.48□□□□□ -0.25
PRKN-211ENST00000615065 FBXL2Q9UKC9 423 aa13.48□□□□□ -0.25
PRKN-211ENST00000615065 WIF1Q9Y5W5 379 aa13.48□□□□□ -0.25
PRKN-211ENST00000615065 MED12LQ86YW9 2145 aa13.48□□□□□ -0.25
PRKN-211ENST00000615065 AKAP6Q13023 2319 aa13.47□□□□□ -0.25
PRKN-211ENST00000615065 C17orf51A8MQB3 221 aa13.47□□□□□ -0.25
PRKN-211ENST00000615065 B4DXG7 233 aa13.47□□□□□ -0.25
PRKN-211ENST00000615065 PLOD3O60568 738 aa13.47□□□□□ -0.25
PRKN-211ENST00000615065 ABCB7O75027 752 aa13.47□□□□□ -0.25
PRKN-211ENST00000615065 PROCP04070 461 aa13.47□□□□□ -0.25
PRKN-211ENST00000615065 DDCP20711 480 aa13.47□□□□□ -0.25
PRKN-211ENST00000615065 IL12BP29460 328 aa13.47□□□□□ -0.25
PRKN-211ENST00000615065 MPIP34949 423 aa13.47□□□□□ -0.25
PRKN-211ENST00000615065 SLCO1A2P46721 670 aa13.47□□□□□ -0.25
PRKN-211ENST00000615065 ART1P52961 327 aa13.47□□□□□ -0.25
PRKN-211ENST00000615065 SRYQ05066 204 aa13.47□□□□□ -0.25
PRKN-211ENST00000615065 ZNF763Q0D2J5 394 aa13.47□□□□□ -0.25
PRKN-211ENST00000615065 C2orf80Q0P641 193 aa13.47□□□□□ -0.25
PRKN-211ENST00000615065 RCAN2Q14206 197 aa13.47□□□□□ -0.25
PRKN-211ENST00000615065 IMPG1Q17R60 797 aa13.47□□□□□ -0.25
PRKN-211ENST00000615065 PLXDC2Q6UX71 529 aa13.47□□□□□ -0.25
PRKN-211ENST00000615065 FRMD7Q6ZUT3 714 aa13.47□□□□□ -0.25
PRKN-211ENST00000615065 LARP4Q71RC2 724 aaKnown RBP eCLIP13.47□□□□□ -0.25
PRKN-211ENST00000615065 PLCZ1Q86YW0 608 aa13.47□□□□□ -0.25
PRKN-211ENST00000615065 SLC44A2Q8IWA5 706 aaPredicted RBP13.47□□□□□ -0.25
PRKN-211ENST00000615065 TRIM42Q8IWZ5 723 aa13.47□□□□□ -0.25
PRKN-211ENST00000615065 OR4N2Q8NGD1 307 aa13.47□□□□□ -0.25
PRKN-211ENST00000615065 ZPLD1Q8TCW7 415 aa13.47□□□□□ -0.25
PRKN-211ENST00000615065 EFHD2Q96C19 240 aaPredicted RBP13.47□□□□□ -0.25
PRKN-211ENST00000615065 CCDC126Q96EE4 140 aa13.47□□□□□ -0.25
PRKN-211ENST00000615065 TUBA1CQ9BQE3 449 aa13.47□□□□□ -0.25
PRKN-211ENST00000615065 C12orf65Q9H3J6 166 aaKnown RBP13.47□□□□□ -0.25
PRKN-211ENST00000615065 CALHM2Q9HA72 323 aa13.47□□□□□ -0.25
PRKN-211ENST00000615065 TAS2R10Q9NYW0 307 aa13.47□□□□□ -0.25
PRKN-211ENST00000615065 POLR3HQ9Y535 204 aaPredicted RBP13.47□□□□□ -0.25
PRKN-211ENST00000615065 MPDZO75970 2070 aa13.47□□□□□ -0.25
PRKN-211ENST00000615065 MYO1GB0I1T2 1018 aa13.46□□□□□ -0.25
PRKN-211ENST00000615065 EEF1E1-BLOC1S5C9J1V9 151 aa13.46□□□□□ -0.25
PRKN-211ENST00000615065 H0Y3Z8 333 aa13.46□□□□□ -0.25
PRKN-211ENST00000615065 EEF1E1O43324 174 aaKnown RBP13.46□□□□□ -0.25
PRKN-211ENST00000615065 PLIN3O60664 434 aa13.46□□□□□ -0.25
PRKN-211ENST00000615065 JUNP05412 331 aaKnown RBP13.46□□□□□ -0.25
PRKN-211ENST00000615065 CYP4B1P13584 511 aa13.46□□□□□ -0.25
PRKN-211ENST00000615065 CPN1P15169 458 aa13.46□□□□□ -0.25
PRKN-211ENST00000615065 TCEA1P23193 301 aaKnown RBP13.46□□□□□ -0.25
PRKN-211ENST00000615065 CTSSP25774 331 aa13.46□□□□□ -0.25
PRKN-211ENST00000615065 SRD5A2P31213 254 aa13.46□□□□□ -0.25
PRKN-211ENST00000615065 GCKP35557 465 aa13.46□□□□□ -0.25
PRKN-211ENST00000615065 KRT20P35900 424 aa13.46□□□□□ -0.25
PRKN-211ENST00000615065 MC3RP41968 323 aa13.46□□□□□ -0.25
PRKN-211ENST00000615065 GSTM5P46439 218 aa13.46□□□□□ -0.25
PRKN-211ENST00000615065 NCBP2P52298 156 aaKnown RBP eCLIP13.46□□□□□ -0.25
PRKN-211ENST00000615065 GAS1P54826 345 aa13.46□□□□□ -0.25
PRKN-211ENST00000615065 GFRA1P56159 465 aa13.46□□□□□ -0.25
PRKN-211ENST00000615065 ZNF155Q12901 538 aaPredicted RBP13.46□□□□□ -0.25
PRKN-211ENST00000615065 EFR3AQ14156 821 aa13.46□□□□□ -0.25
PRKN-211ENST00000615065 FLYWCH1Q4VC44 716 aa13.46□□□□□ -0.25
PRKN-211ENST00000615065 OR5M10Q6IEU7 315 aa13.46□□□□□ -0.25
PRKN-211ENST00000615065 FAM71E1Q6IPT2 247 aa13.46□□□□□ -0.25
PRKN-211ENST00000615065 TMEM107Q6UX40 140 aa13.46□□□□□ -0.25
PRKN-211ENST00000615065 IFNEQ86WN2 208 aa13.46□□□□□ -0.25
PRKN-211ENST00000615065 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.46□□□□□ -0.25
PRKN-211ENST00000615065 RNF138Q8WVD3 245 aa13.46□□□□□ -0.25
PRKN-211ENST00000615065 LRRC46Q96FV0 321 aa13.46□□□□□ -0.25
PRKN-211ENST00000615065 G6PC3Q9BUM1 346 aa13.46□□□□□ -0.25
PRKN-211ENST00000615065 POLDIP3Q9BY77 421 aaKnown RBP13.46□□□□□ -0.25
PRKN-211ENST00000615065 SHCBP1LQ9BZQ2 653 aa13.46□□□□□ -0.25
PRKN-211ENST00000615065 LIME1Q9H400 295 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms