RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 DDTLA6NHG4 134 aaPredicted RBP13.12□□□□□ -0.31
CHD1-212ENST00000614616 G3V2L1 256 aa13.12□□□□□ -0.31
CHD1-212ENST00000614616 JUNP05412 331 aaKnown RBP13.12□□□□□ -0.31
CHD1-212ENST00000614616 CPT2P23786 658 aa13.12□□□□□ -0.31
CHD1-212ENST00000614616 BORCS7Q96B45 105 aa13.12□□□□□ -0.31
CHD1-212ENST00000614616 SDR39U1Q9NRG7 319 aaPredicted RBP13.12□□□□□ -0.31
CHD1-212ENST00000614616 POLLQ9UGP5 575 aa13.12□□□□□ -0.31
CHD1-212ENST00000614616 GAPDHSO14556 408 aaPredicted RBP13.12□□□□□ -0.31
CHD1-212ENST00000614616 TGOLN2O43493 480 aa13.12□□□□□ -0.31
CHD1-212ENST00000614616 ASGR1P07306 291 aa13.12□□□□□ -0.31
CHD1-212ENST00000614616 LYSMD3Q7Z3D4 306 aa13.12□□□□□ -0.31
CHD1-212ENST00000614616 AKR7LQ8NHP1 331 aa13.12□□□□□ -0.31
CHD1-212ENST00000614616 SLC25A36Q96CQ1 311 aa13.12□□□□□ -0.31
CHD1-212ENST00000614616 URM1Q9BTM9 101 aaKnown RBP13.12□□□□□ -0.31
CHD1-212ENST00000614616 ASH2LQ9UBL3 628 aa13.12□□□□□ -0.31
CHD1-212ENST00000614616 WIF1Q9Y5W5 379 aa13.12□□□□□ -0.31
CHD1-212ENST00000614616 G0S2P27469 103 aa13.12□□□□□ -0.31
CHD1-212ENST00000614616 CTHP32929 405 aa13.12□□□□□ -0.31
CHD1-212ENST00000614616 NDUFV1P49821 464 aa13.12□□□□□ -0.31
CHD1-212ENST00000614616 GPR33Q49SQ1 333 aa13.12□□□□□ -0.31
CHD1-212ENST00000614616 NLRC3Q7RTR2 1065 aa13.12□□□□□ -0.31
CHD1-212ENST00000614616 HOXD1Q9GZZ0 328 aa13.12□□□□□ -0.31
CHD1-212ENST00000614616 ZNF701Q9NV72 531 aaPredicted RBP13.12□□□□□ -0.31
CHD1-212ENST00000614616 HAS3O00219 553 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 PHYHO14832 338 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 RAB3DO95716 219 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 ETV4P43268 484 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 SOX9P48436 509 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 STC1P52823 247 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 UPP1Q16831 310 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.11□□□□□ -0.311e-7■■□□□ 13.4
CHD1-212ENST00000614616 UNQ6126/PRO20091Q6UXV3 157 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 TCTE3Q8IZS6 198 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 OR6V1Q8N148 313 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 FAM86B1Q8N7N1 296 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 C1orf127Q8N9H9 656 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 RAB3CQ96E17 227 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 ACTRT3Q9BYD9 372 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 C11orf54Q9H0W9 315 aaPredicted RBP13.11□□□□□ -0.31
CHD1-212ENST00000614616 TMEM235A6NFC5 223 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 ADAM23O75077 832 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 HRGP04196 525 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 RAB40ALP0C0E4 278 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 PYCR1P32322 319 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 PDX1P52945 283 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 CAP1Q01518 475 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 PLA2G7Q13093 441 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 RAET1EQ8TD07 263 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 RAB40AQ8WXH6 277 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 SYT3Q9BQG1 590 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 C12orf10Q9HB07 376 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 GRM6O15303 877 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 CD3GP09693 182 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 NHSL2Q5HYW2 709 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 FAM129CQ86XR2 697 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 SGPP2Q8IWX5 399 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 ZNF561Q8N587 486 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 BBS10Q8TAM1 723 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 PTCHD1Q96NR3 888 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 NTPCRQ9BSD7 190 aaKnown RBP13.11□□□□□ -0.31
CHD1-212ENST00000614616 SLC6A17Q9H1V8 727 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 TSPAN10Q9H1Z9 355 aaPredicted RBP13.11□□□□□ -0.31
CHD1-212ENST00000614616 HEBP2Q9Y5Z4 205 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 CARNS1A5YM72 827 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 MAS1P04201 325 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 CTSEP14091 401 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 CPN1P15169 458 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 CD9P21926 228 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 HCCSP53701 268 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 BEX3Q00994 111 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 SIX1Q15475 284 aaPredicted RBP13.11□□□□□ -0.31
CHD1-212ENST00000614616 ZBTB37Q5TC79 503 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 THOC6Q86W42 341 aaKnown RBP13.11□□□□□ -0.31
CHD1-212ENST00000614616 NETO1Q8TDF5 533 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 RNF128Q8TEB7 428 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 GPR88Q9GZN0 384 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 PTGDR2Q9Y5Y4 395 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 LRRC72A6NJI9 287 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 VNN1O95497 513 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 F7P08709 466 aaPredicted RBP13.11□□□□□ -0.31
CHD1-212ENST00000614616 NDUFV2P19404 249 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 ASAH1Q13510 395 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 PARGQ86W56 976 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 OR4M1Q8NGD0 313 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 NANPQ8TBE9 248 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 FAM46AQ96IP4 442 aaKnown RBP13.11□□□□□ -0.31
CHD1-212ENST00000614616 TTTY10Q9BZA0 68 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 TMEM72A0PK05 275 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 METTL15A6NJ78 407 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 PIP5K1CO60331 668 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 FHP07954 510 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 IFNGR1P15260 489 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 TAS2R19P59542 299 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 IRAK1BP1Q5VVH5 260 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 PLEKHH3Q7Z736 793 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 ANKK1Q8NFD2 765 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 OR4C15Q8NGM1 316 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 SUN3Q8TAQ9 357 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 SUSD6Q92537 303 aa13.11□□□□□ -0.31
CHD1-212ENST00000614616 FAM46BQ96A09 425 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms