RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 ZNF691Q5VV52 312 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 DESI1Q6ICB0 168 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 GUSBP11Q6P575 273 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 PODNL1Q6PEZ8 512 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 SLC36A4Q6YBV0 504 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 CCDC80Q76M96 950 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 PIWIL3Q7Z3Z3 882 aaKnown RBP3.21□□□□□ -1.9
LIG4-205ENST00000614526 LAPTM4BQ86VI4 370 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 IQCHQ86VS3 1027 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 DNAJC22Q8N4W6 341 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 EID2Q8N6I1 236 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 NATD1Q8N6N6 113 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 ZNF321PQ8N8H1 164 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 COX18Q8N8Q8 333 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 GATSQ8NAP1 163 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 ZNF540Q8NDQ6 660 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 OR52P1PQ8NH57 321 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 PSMA8Q8TAA3 256 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 TSLPQ969D9 159 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 TCTN2Q96GX1 697 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 PTCHD1Q96NR3 888 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 LMF1Q96S06 567 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 ZNF347Q96SE7 839 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 ELF4Q99607 663 aaPredicted RBP3.21□□□□□ -1.9
LIG4-205ENST00000614526 DPYSL5Q9BPU6 564 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.21□□□□□ -1.9
LIG4-205ENST00000614526 SLC7A5P2Q9GIP4 190 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 ROGDIQ9GZN7 287 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 PRTFDC1Q9NRG1 225 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 PAPOLBQ9NRJ5 636 aaKnown RBP3.21□□□□□ -1.9
LIG4-205ENST00000614526 MS4A12Q9NXJ0 267 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 USE1Q9NZ43 259 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 MAT2BQ9NZL9 334 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 CNIH4Q9P003 139 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 ERVK-19Q9WJR5 959 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 GPC6Q9Y625 555 aaPredicted RBP3.21□□□□□ -1.9
LIG4-205ENST00000614526 ALPK2Q86TB3 2170 aa3.21□□□□□ -1.9
LIG4-205ENST00000614526 URB1O60287 2271 aaKnown RBP3.2□□□□□ -1.9
LIG4-205ENST00000614526 IGHV3-20A0A0C4DH32 117 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 FAM221BA6H8Z2 402 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 FAM20BO75063 409 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 INMTO95050 263 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 APOL3O95236 402 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 FADS2O95864 444 aaKnown RBP3.2□□□□□ -1.9
LIG4-205ENST00000614526 CH25HO95992 272 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 PABPC4LP0CB38 370 aaKnown RBP3.2□□□□□ -1.9
LIG4-205ENST00000614526 GIMD1P0DJR0 217 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 FUT1P19526 365 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 CRHBPP24387 322 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 ELAVL4P26378 380 aaKnown RBP3.2□□□□□ -1.9
LIG4-205ENST00000614526 CD1CP29017 333 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 C21orf33P30042 268 aaPredicted RBP3.2□□□□□ -1.9
LIG4-205ENST00000614526 NUDT1P36639 197 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 CTSKP43235 329 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 TSFMP43897 325 aaKnown RBP3.2□□□□□ -1.9
LIG4-205ENST00000614526 RGS8P57771 180 aaPredicted RBP3.2□□□□□ -1.9
LIG4-205ENST00000614526 ESRRGP62508 458 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 RAB39AQ14964 217 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 MLC1Q15049 377 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 PTGES3Q15185 160 aaKnown RBP3.2□□□□□ -1.9
LIG4-205ENST00000614526 SHBQ15464 509 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 PRICKLE4Q2TBC4 344 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 HLA-BQ31612 363 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 NDUFAF6Q330K2 333 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 ZNF628Q5EBL2 1059 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 COLEC12Q5KU26 742 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 CWF19L1Q69YN2 538 aaKnown RBP3.2□□□□□ -1.9
LIG4-205ENST00000614526 TCEAL6Q6IPX3 200 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 ARHGAP22Q7Z5H3 698 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 GPR141Q7Z602 305 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 B3GNT8Q7Z7M8 397 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 NKAIN4Q8IVV8 208 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 GALNT12Q8IXK2 581 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 ENTHD1Q8IYW4 607 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 PRR22Q8IZ63 422 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 VWA5B2Q8N398 1253 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 OR4C15Q8NGM1 316 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 DNASE2BQ8WZ79 361 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 RIT1Q92963 219 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 TCEAL3Q969E4 200 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 CCDC74AQ96AQ1 378 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 OTULINQ96BN8 352 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 ZDHHC12Q96GR4 267 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 MPP4Q96JB8 637 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 MS4A4EQ96PG1 132 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 SDF2Q99470 211 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 EPYCQ99645 322 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 GPA33Q99795 319 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 NPLQ9BXD5 320 aaPredicted RBP3.2□□□□□ -1.9
LIG4-205ENST00000614526 OR8D2Q9GZM6 311 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 NRSN2Q9GZP1 204 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 GAREM1Q9H706 876 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 CXorf21Q9HAI6 301 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 NECTIN3Q9NQS3 549 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 IMPAD1Q9NX62 359 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 KCNE5Q9UJ90 142 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 A4GNTQ9UNA3 340 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 PLCL2Q9UPR0 1127 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 SLC9A8Q9Y2E8 581 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 HCN4Q9Y3Q4 1203 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms