RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 CNTN1Q12860 1018 aa20.66■□□□□ 0.9
POLR2J3-220ENST00000613744 FCN2Q15485 313 aa20.66■□□□□ 0.9
POLR2J3-220ENST00000613744 C3orf38Q5JPI3 329 aa20.66■□□□□ 0.9
POLR2J3-220ENST00000613744 CD200R1LQ6Q8B3 271 aa20.66■□□□□ 0.9
POLR2J3-220ENST00000613744 C16orf62Q7Z3J2 963 aa20.66■□□□□ 0.9
POLR2J3-220ENST00000613744 BMP8AQ7Z5Y6 402 aa20.66■□□□□ 0.9
POLR2J3-220ENST00000613744 SLC30A8Q8IWU4 369 aa20.66■□□□□ 0.9
POLR2J3-220ENST00000613744 TSTD1Q8NFU3 115 aa20.66■□□□□ 0.9
POLR2J3-220ENST00000613744 OR7G3Q8NG95 312 aa20.66■□□□□ 0.9
POLR2J3-220ENST00000613744 TAS2R7Q9NYW3 318 aa20.66■□□□□ 0.9
POLR2J3-220ENST00000613744 DNAJC27Q9NZQ0 273 aa20.66■□□□□ 0.9
POLR2J3-220ENST00000613744 REV1Q9UBZ9 1251 aa20.66■□□□□ 0.9
POLR2J3-220ENST00000613744 SF3B6Q9Y3B4 125 aaKnown RBP20.66■□□□□ 0.9
POLR2J3-220ENST00000613744 ISM1B1AKI9 464 aa20.66■□□□□ 0.9
POLR2J3-220ENST00000613744 TIMP2P16035 220 aa20.66■□□□□ 0.9
POLR2J3-220ENST00000613744 DRD3P35462 400 aa20.66■□□□□ 0.9
POLR2J3-220ENST00000613744 OR1E2P47887 323 aa20.66■□□□□ 0.9
POLR2J3-220ENST00000613744 WNT4P56705 351 aa20.66■□□□□ 0.9
POLR2J3-220ENST00000613744 POLR2LP62875 67 aaKnown RBP20.66■□□□□ 0.9
POLR2J3-220ENST00000613744 SCARB2Q14108 478 aa20.66■□□□□ 0.9
POLR2J3-220ENST00000613744 CPTPQ5TA50 214 aa20.66■□□□□ 0.9
POLR2J3-220ENST00000613744 HDDC3Q8N4P3 179 aa20.66■□□□□ 0.9
POLR2J3-220ENST00000613744 OR52P1PQ8NH57 321 aa20.66■□□□□ 0.9
POLR2J3-220ENST00000613744 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.66■□□□□ 0.9
POLR2J3-220ENST00000613744 PHF21AQ96BD5 680 aa20.66■□□□□ 0.9
POLR2J3-220ENST00000613744 SCMH1Q96GD3 660 aa20.66■□□□□ 0.9
POLR2J3-220ENST00000613744 SLC6A18Q96N87 628 aa20.66■□□□□ 0.9
POLR2J3-220ENST00000613744 TPSD1Q9BZJ3 242 aa20.66■□□□□ 0.9
POLR2J3-220ENST00000613744 ZC4H2Q9NQZ6 224 aa20.66■□□□□ 0.9
POLR2J3-220ENST00000613744 LYARQ9NX58 379 aaKnown RBP20.66■□□□□ 0.9
POLR2J3-220ENST00000613744 COMMD3Q9UBI1 195 aa20.66■□□□□ 0.9
POLR2J3-220ENST00000613744 WDFY4Q6ZS81 3184 aa20.65■□□□□ 0.9
POLR2J3-220ENST00000613744 A0A1B0GVI7 797 aa20.65■□□□□ 0.9
POLR2J3-220ENST00000613744 YY2O15391 372 aa20.65■□□□□ 0.9
POLR2J3-220ENST00000613744 PCDH7O60245 1069 aa20.65■□□□□ 0.9
POLR2J3-220ENST00000613744 NR2F6P10588 404 aa20.65■□□□□ 0.9
POLR2J3-220ENST00000613744 TNFRSF1BP20333 461 aa20.65■□□□□ 0.9
POLR2J3-220ENST00000613744 GABRA5P31644 462 aa20.65■□□□□ 0.9
POLR2J3-220ENST00000613744 P2RY2P41231 377 aa20.65■□□□□ 0.9
POLR2J3-220ENST00000613744 HEPACAMQ14CZ8 416 aa20.65■□□□□ 0.9
POLR2J3-220ENST00000613744 PLA1AQ53H76 456 aa20.65■□□□□ 0.9
POLR2J3-220ENST00000613744 HACD4Q5VWC8 232 aa20.65■□□□□ 0.9
POLR2J3-220ENST00000613744 FAM46CQ5VWP2 391 aa20.65■□□□□ 0.9
POLR2J3-220ENST00000613744 ADGRF3Q8IZF5 1079 aa20.65■□□□□ 0.9
POLR2J3-220ENST00000613744 TAGAPQ8N103 731 aa20.65■□□□□ 0.9
POLR2J3-220ENST00000613744 GOT1L1Q8NHS2 421 aaPredicted RBP20.65■□□□□ 0.9
POLR2J3-220ENST00000613744 RBPMSQ93062 196 aaKnown RBP20.65■□□□□ 0.9
POLR2J3-220ENST00000613744 EID2BQ96D98 161 aa20.65■□□□□ 0.9
POLR2J3-220ENST00000613744 CXorf40BQ96DE9 158 aa20.65■□□□□ 0.9
POLR2J3-220ENST00000613744 SCRN2Q96FV2 425 aa20.65■□□□□ 0.9
POLR2J3-220ENST00000613744 EBPLQ9BY08 206 aa20.65■□□□□ 0.9
POLR2J3-220ENST00000613744 ZFYVE1Q9HBF4 777 aa20.65■□□□□ 0.9
POLR2J3-220ENST00000613744 SPATA6Q9NWH7 488 aaPredicted RBP20.65■□□□□ 0.9
POLR2J3-220ENST00000613744 GLS2Q9UI32 602 aa20.65■□□□□ 0.9
POLR2J3-220ENST00000613744 A0A0A6YYJ9 748 aa20.65■□□□□ 0.9
POLR2J3-220ENST00000613744 TRDV1A0A1B0GX56 115 aa20.65■□□□□ 0.9
POLR2J3-220ENST00000613744 TMEM129A0AVI4 362 aa20.65■□□□□ 0.9
POLR2J3-220ENST00000613744 RNASET2O00584 256 aaKnown RBP20.65■□□□□ 0.9
POLR2J3-220ENST00000613744 OPN1SWP03999 348 aa20.65■□□□□ 0.9
POLR2J3-220ENST00000613744 JUPP14923 745 aa20.65■□□□□ 0.9
POLR2J3-220ENST00000613744 PRKACAP17612 351 aa20.65■□□□□ 0.9
POLR2J3-220ENST00000613744 ZP3P21754 424 aa20.65■□□□□ 0.9
POLR2J3-220ENST00000613744 HNMTP50135 292 aa20.65■□□□□ 0.9
POLR2J3-220ENST00000613744 POU4F3Q15319 338 aa20.65■□□□□ 0.9
POLR2J3-220ENST00000613744 P2RY14Q15391 338 aa20.65■□□□□ 0.9
POLR2J3-220ENST00000613744 ZNF630Q2M218 657 aaPredicted RBP20.65■□□□□ 0.9
POLR2J3-220ENST00000613744 TSSK4Q6SA08 328 aa20.65■□□□□ 0.9
POLR2J3-220ENST00000613744 FAM26EQ8N5C1 309 aa20.65■□□□□ 0.9
POLR2J3-220ENST00000613744 OR52N2Q8NGI0 321 aa20.65■□□□□ 0.9
POLR2J3-220ENST00000613744 PPP1R16AQ96I34 528 aa20.65■□□□□ 0.9
POLR2J3-220ENST00000613744 OR2M2Q96R28 347 aa20.65■□□□□ 0.9
POLR2J3-220ENST00000613744 UBL7Q96S82 380 aaPredicted RBP20.65■□□□□ 0.9
POLR2J3-220ENST00000613744 ATF6BQ99941 703 aa20.65■□□□□ 0.9
POLR2J3-220ENST00000613744 COL25A1Q9BXS0 654 aaPredicted RBP20.65■□□□□ 0.9
POLR2J3-220ENST00000613744 ERVMER34-1Q9H9K5 563 aa20.65■□□□□ 0.9
POLR2J3-220ENST00000613744 C11orf16Q9NQ32 467 aa20.65■□□□□ 0.9
POLR2J3-220ENST00000613744 EVA1BQ9NVM1 165 aa20.65■□□□□ 0.9
POLR2J3-220ENST00000613744 KCTD5Q9NXV2 234 aa20.65■□□□□ 0.9
POLR2J3-220ENST00000613744 IL20Q9NYY1 176 aa20.65■□□□□ 0.9
POLR2J3-220ENST00000613744 B4GALT6Q9UBX8 382 aa20.65■□□□□ 0.9
POLR2J3-220ENST00000613744 SPIN1Q9Y657 262 aaPredicted RBP20.65■□□□□ 0.9
POLR2J3-220ENST00000613744 ZDBF2Q9HCK1 2354 aa20.64■□□□□ 0.89
POLR2J3-220ENST00000613744 UGDHO60701 494 aa20.64■□□□□ 0.89
POLR2J3-220ENST00000613744 HPGDSO60760 199 aa20.64■□□□□ 0.89
POLR2J3-220ENST00000613744 ADH1BP00325 375 aa20.64■□□□□ 0.89
POLR2J3-220ENST00000613744 POU1F1P28069 291 aa20.64■□□□□ 0.89
POLR2J3-220ENST00000613744 CXCL12P48061 93 aa20.64■□□□□ 0.89
POLR2J3-220ENST00000613744 SLC6A12P48065 614 aa20.64■□□□□ 0.89
POLR2J3-220ENST00000613744 RPIAP49247 311 aa20.64■□□□□ 0.89
POLR2J3-220ENST00000613744 GAB1Q13480 694 aa20.64■□□□□ 0.89
POLR2J3-220ENST00000613744 ZNF284Q2VY69 593 aa20.64■□□□□ 0.89
POLR2J3-220ENST00000613744 ZNF57Q68EA5 555 aaPredicted RBP20.64■□□□□ 0.89
POLR2J3-220ENST00000613744 CRTC1Q6UUV9 634 aa20.64■□□□□ 0.89
POLR2J3-220ENST00000613744 ERN2Q76MJ5 926 aaKnown RBP20.64■□□□□ 0.89
POLR2J3-220ENST00000613744 TMEM105Q8N8V8 129 aa20.64■□□□□ 0.89
POLR2J3-220ENST00000613744 TM9SF4Q92544 642 aa20.64■□□□□ 0.89
POLR2J3-220ENST00000613744 UFD1Q92890 307 aa20.64■□□□□ 0.89
POLR2J3-220ENST00000613744 C1GALT1C1Q96EU7 318 aa20.64■□□□□ 0.89
POLR2J3-220ENST00000613744 MRPS18AQ9NVS2 196 aaKnown RBP20.64■□□□□ 0.89
POLR2J3-220ENST00000613744 ARL15Q9NXU5 204 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms