RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 PRRC1Q96M27 445 aa13.81□□□□□ -0.2
CDH1-213ENST00000612417 ASPNQ9BXN1 380 aa13.81□□□□□ -0.2
CDH1-213ENST00000612417 SMURF1Q9HCE7 757 aa13.81□□□□□ -0.2
CDH1-213ENST00000612417 STUB1Q9UNE7 303 aa13.81□□□□□ -0.2
CDH1-213ENST00000612417 DIMT1Q9UNQ2 313 aaKnown RBP13.81□□□□□ -0.2
CDH1-213ENST00000612417 HS3ST3A1Q9Y663 406 aa13.81□□□□□ -0.2
CDH1-213ENST00000612417 HYKKA2RU49 373 aa13.8□□□□□ -0.2
CDH1-213ENST00000612417 HTR3EA5X5Y0 456 aa13.8□□□□□ -0.2
CDH1-213ENST00000612417 M0R3H8 397 aa13.8□□□□□ -0.2
CDH1-213ENST00000612417 TPST2O60704 377 aa13.8□□□□□ -0.2
CDH1-213ENST00000612417 EPPINO95925 133 aa13.8□□□□□ -0.2
CDH1-213ENST00000612417 LGI1O95970 557 aa13.8□□□□□ -0.2
CDH1-213ENST00000612417 IGLV3-19P01714 112 aa13.8□□□□□ -0.2
CDH1-213ENST00000612417 CKMT1AP12532 417 aa13.8□□□□□ -0.2
CDH1-213ENST00000612417 MMP11P24347 488 aa13.8□□□□□ -0.2
CDH1-213ENST00000612417 GPC1P35052 558 aa13.8□□□□□ -0.2
CDH1-213ENST00000612417 PCYT1AP49585 367 aa13.8□□□□□ -0.2
CDH1-213ENST00000612417 CCR5P51681 352 aa13.8□□□□□ -0.2
CDH1-213ENST00000612417 ARPC4P59998 168 aa13.8□□□□□ -0.2
CDH1-213ENST00000612417 C1DQ13901 141 aaKnown RBP13.8□□□□□ -0.2
CDH1-213ENST00000612417 RPE65Q16518 533 aa13.8□□□□□ -0.2
CDH1-213ENST00000612417 BHLHB9Q6PI77 547 aa13.8□□□□□ -0.2
CDH1-213ENST00000612417 ZER1Q7Z7L7 766 aa13.8□□□□□ -0.2
CDH1-213ENST00000612417 OR4K5Q8NGD3 323 aa13.8□□□□□ -0.2
CDH1-213ENST00000612417 SUN3Q8TAQ9 357 aa13.8□□□□□ -0.2
CDH1-213ENST00000612417 C17orf62Q9BQA9 187 aa13.8□□□□□ -0.2
CDH1-213ENST00000612417 FNDC11Q9BVV2 318 aa13.8□□□□□ -0.2
CDH1-213ENST00000612417 RAB11FIP5Q9BXF6 653 aa13.8□□□□□ -0.2
CDH1-213ENST00000612417 TMEM168Q9H0V1 697 aa13.8□□□□□ -0.2
CDH1-213ENST00000612417 WSB2Q9NYS7 404 aaPredicted RBP13.8□□□□□ -0.2
CDH1-213ENST00000612417 WNT16Q9UBV4 365 aa13.8□□□□□ -0.2
CDH1-213ENST00000612417 TBC1D29Q9UFV1 150 aa13.8□□□□□ -0.2
CDH1-213ENST00000612417 TESQ9UGI8 421 aaKnown RBP13.8□□□□□ -0.2
CDH1-213ENST00000612417 KLHL3Q9UH77 587 aa13.8□□□□□ -0.2
CDH1-213ENST00000612417 FANCMQ8IYD8 2048 aa13.8□□□□□ -0.2
CDH1-213ENST00000612417 TDRD6O60522 2096 aaKnown RBP13.8□□□□□ -0.2
CDH1-213ENST00000612417 ARHGEF17Q96PE2 2063 aaPredicted RBP13.8□□□□□ -0.2
CDH1-213ENST00000612417 CTDSP2O14595 271 aa13.79□□□□□ -0.2
CDH1-213ENST00000612417 SNPHO15079 494 aa13.79□□□□□ -0.2
CDH1-213ENST00000612417 PRKYO43930 277 aa13.79□□□□□ -0.2
CDH1-213ENST00000612417 SPNP16150 400 aa13.79□□□□□ -0.2
CDH1-213ENST00000612417 PKLRP30613 574 aa13.79□□□□□ -0.2
CDH1-213ENST00000612417 RPS19P39019 145 aaKnown RBP13.79□□□□□ -0.2
CDH1-213ENST00000612417 MAN2A2P49641 1150 aa13.79□□□□□ -0.2
CDH1-213ENST00000612417 NCBP2P52298 156 aaKnown RBP eCLIP13.79□□□□□ -0.2
CDH1-213ENST00000612417 TPTEP56180 551 aa13.79□□□□□ -0.2
CDH1-213ENST00000612417 CDK5Q00535 292 aa13.79□□□□□ -0.2
CDH1-213ENST00000612417 FUT5Q11128 374 aa13.79□□□□□ -0.2
CDH1-213ENST00000612417 SYT14P1Q58G82 188 aa13.79□□□□□ -0.2
CDH1-213ENST00000612417 DESI1Q6ICB0 168 aa13.79□□□□□ -0.2
CDH1-213ENST00000612417 TMEM53Q6P2H8 277 aa13.79□□□□□ -0.2
CDH1-213ENST00000612417 TMEM145Q8NBT3 493 aa13.79□□□□□ -0.2
CDH1-213ENST00000612417 OR13H1Q8NG92 308 aa13.79□□□□□ -0.2
CDH1-213ENST00000612417 OR2L8Q8NGY9 312 aa13.79□□□□□ -0.2
CDH1-213ENST00000612417 CCL4L1Q8NHW4 92 aa13.79□□□□□ -0.2
CDH1-213ENST00000612417 WDFY2Q96P53 400 aa13.79□□□□□ -0.2
CDH1-213ENST00000612417 PRDM6Q9NQX0 595 aa13.79□□□□□ -0.2
CDH1-213ENST00000612417 MRPS18AQ9NVS2 196 aaKnown RBP13.79□□□□□ -0.2
CDH1-213ENST00000612417 TRPC4Q9UBN4 977 aa13.79□□□□□ -0.2
CDH1-213ENST00000612417 TRBV23OR9-2A0A075B6M9 112 aa13.79□□□□□ -0.2
CDH1-213ENST00000612417 SLC35F4A4IF30 521 aa13.79□□□□□ -0.2
CDH1-213ENST00000612417 PRR19A6NJB7 356 aa13.79□□□□□ -0.2
CDH1-213ENST00000612417 TNFRSF10CO14798 259 aa13.79□□□□□ -0.2
CDH1-213ENST00000612417 PPM1DO15297 605 aa13.79□□□□□ -0.2
CDH1-213ENST00000612417 ZNF217O75362 1048 aa13.79□□□□□ -0.2
CDH1-213ENST00000612417 CHRM4P08173 479 aa13.79□□□□□ -0.2
CDH1-213ENST00000612417 TNNI3P19429 210 aa13.79□□□□□ -0.2
CDH1-213ENST00000612417 GSTM3P21266 225 aa13.79□□□□□ -0.2
CDH1-213ENST00000612417 TNFSF8P32971 234 aa13.79□□□□□ -0.2
CDH1-213ENST00000612417 ACTR1BP42025 376 aa13.79□□□□□ -0.2
CDH1-213ENST00000612417 RABIFP47224 123 aa13.79□□□□□ -0.2
CDH1-213ENST00000612417 GIPRP48546 466 aa13.79□□□□□ -0.2
CDH1-213ENST00000612417 ACTR1AP61163 376 aa13.79□□□□□ -0.2
CDH1-213ENST00000612417 HYAL2Q12891 473 aa13.79□□□□□ -0.2
CDH1-213ENST00000612417 FZD5Q13467 585 aa13.79□□□□□ -0.2
CDH1-213ENST00000612417 SLC9A5Q14940 896 aa13.79□□□□□ -0.2
CDH1-213ENST00000612417 ATAD3BQ5T9A4 648 aa13.79□□□□□ -0.2
CDH1-213ENST00000612417 MRM1Q6IN84 353 aaKnown RBP13.79□□□□□ -0.2
CDH1-213ENST00000612417 CCBE1Q6UXH8 406 aaPredicted RBP13.79□□□□□ -0.2
CDH1-213ENST00000612417 GDPD3Q7L5L3 318 aa13.79□□□□□ -0.2
CDH1-213ENST00000612417 AKAP14Q86UN6 197 aa13.79□□□□□ -0.2
CDH1-213ENST00000612417 PHC2Q8IXK0 858 aa13.79□□□□□ -0.2
CDH1-213ENST00000612417 OR6T1Q8NGN1 323 aa13.79□□□□□ -0.2
CDH1-213ENST00000612417 MOAP1Q96BY2 351 aa13.79□□□□□ -0.2
CDH1-213ENST00000612417 CEP19Q96LK0 163 aa13.79□□□□□ -0.2
CDH1-213ENST00000612417 BBS4Q96RK4 519 aa13.79□□□□□ -0.2
CDH1-213ENST00000612417 KCNS3Q9BQ31 491 aa13.79□□□□□ -0.2
CDH1-213ENST00000612417 CNPPD1Q9BV87 410 aa13.79□□□□□ -0.2
CDH1-213ENST00000612417 SARGQ9BW04 601 aa13.79□□□□□ -0.2
CDH1-213ENST00000612417 PINK1Q9BXM7 581 aa13.79□□□□□ -0.2
CDH1-213ENST00000612417 BARHL1Q9BZE3 327 aa13.79□□□□□ -0.2
CDH1-213ENST00000612417 POLR2J2Q9GZM3 115 aaKnown RBP13.79□□□□□ -0.2
CDH1-213ENST00000612417 TVP23BQ9NYZ1 205 aa13.79□□□□□ -0.2
CDH1-213ENST00000612417 CAB39Q9Y376 341 aaPredicted RBP13.79□□□□□ -0.2
CDH1-213ENST00000612417 ASB4Q9Y574 426 aa13.79□□□□□ -0.2
CDH1-213ENST00000612417 HEBP2Q9Y5Z4 205 aa13.79□□□□□ -0.2
CDH1-213ENST00000612417 COLEC10Q9Y6Z7 277 aa13.79□□□□□ -0.2
CDH1-213ENST00000612417 A0A0G2JN53 185 aa13.78□□□□□ -0.2
CDH1-213ENST00000612417 A0A0G2JPF8 293 aa13.78□□□□□ -0.2
CDH1-213ENST00000612417 IQCMA0A1B0GVH7 501 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms