RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 RD3Q7Z3Z2 195 aa13.22□□□□□ -0.29
COL6A1-207ENST00000612273 UBE3DQ7Z6J8 389 aa13.22□□□□□ -0.29
COL6A1-207ENST00000612273 LRRTM4Q86VH4 590 aa13.22□□□□□ -0.29
COL6A1-207ENST00000612273 OR9A2Q8NGT5 310 aa13.22□□□□□ -0.29
COL6A1-207ENST00000612273 NEIL3Q8TAT5 605 aa13.22□□□□□ -0.29
COL6A1-207ENST00000612273 SLC7A6Q92536 515 aa13.22□□□□□ -0.29
COL6A1-207ENST00000612273 SECISBP2Q96T21 854 aaKnown RBP13.22□□□□□ -0.29
COL6A1-207ENST00000612273 RHBGQ9H310 441 aa13.22□□□□□ -0.29
COL6A1-207ENST00000612273 A4GALTQ9NPC4 353 aa13.22□□□□□ -0.29
COL6A1-207ENST00000612273 SLC35C2Q9NQQ7 365 aa13.22□□□□□ -0.29
COL6A1-207ENST00000612273 PCDHGB2Q9Y5G2 931 aa13.22□□□□□ -0.29
COL6A1-207ENST00000612273 C4orf51C9J302 202 aa13.22□□□□□ -0.29
COL6A1-207ENST00000612273 SOCS6O14544 535 aa13.22□□□□□ -0.29
COL6A1-207ENST00000612273 PRNPP04156 253 aa13.22□□□□□ -0.29
COL6A1-207ENST00000612273 SMSP52788 366 aa13.22□□□□□ -0.29
COL6A1-207ENST00000612273 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.22□□□□□ -0.29
COL6A1-207ENST00000612273 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.22□□□□□ -0.29
COL6A1-207ENST00000612273 C6orf132Q5T0Z8 1188 aa13.22□□□□□ -0.29
COL6A1-207ENST00000612273 NRMQ8IXM6 262 aa13.22□□□□□ -0.29
COL6A1-207ENST00000612273 YIPF7Q8N8F6 280 aa13.22□□□□□ -0.29
COL6A1-207ENST00000612273 UFD1Q92890 307 aa13.22□□□□□ -0.29
COL6A1-207ENST00000612273 KLHL1Q9NR64 748 aa13.22□□□□□ -0.29
COL6A1-207ENST00000612273 SEMA4GQ9NTN9 838 aa13.22□□□□□ -0.29
COL6A1-207ENST00000612273 NPIPA5A0A0B4J1W7 369 aa13.21□□□□□ -0.29
COL6A1-207ENST00000612273 NPIPA7E9PJI5 369 aa13.21□□□□□ -0.29
COL6A1-207ENST00000612273 NPIPA8P0DM63 369 aa13.21□□□□□ -0.29
COL6A1-207ENST00000612273 TRHRP34981 398 aaPredicted RBP13.21□□□□□ -0.29
COL6A1-207ENST00000612273 MEDAGQ5VYS4 303 aa13.21□□□□□ -0.29
COL6A1-207ENST00000612273 KRT74Q7RTS7 529 aa13.21□□□□□ -0.29
COL6A1-207ENST00000612273 TMEFF1Q8IYR6 380 aa13.21□□□□□ -0.29
COL6A1-207ENST00000612273 OR8D1Q8WZ84 308 aa13.21□□□□□ -0.29
COL6A1-207ENST00000612273 RNF121Q9H920 327 aa13.21□□□□□ -0.29
COL6A1-207ENST00000612273 FZD3Q9NPG1 666 aa13.21□□□□□ -0.29
COL6A1-207ENST00000612273 PTGFRNQ9P2B2 879 aa13.21□□□□□ -0.29
COL6A1-207ENST00000612273 GSTK1Q9Y2Q3 226 aa13.21□□□□□ -0.29
COL6A1-207ENST00000612273 POLR1CO15160 346 aaPredicted RBP13.21□□□□□ -0.29
COL6A1-207ENST00000612273 REM1O75628 298 aa13.21□□□□□ -0.29
COL6A1-207ENST00000612273 PAPLNO95428 1278 aa13.21□□□□□ -0.29
COL6A1-207ENST00000612273 NTSP30990 170 aa13.21□□□□□ -0.29
COL6A1-207ENST00000612273 TRIM23P36406 574 aa13.21□□□□□ -0.29
COL6A1-207ENST00000612273 OR4C11Q6IEV9 310 aa13.21□□□□□ -0.29
COL6A1-207ENST00000612273 C16orf62Q7Z3J2 963 aa13.21□□□□□ -0.29
COL6A1-207ENST00000612273 TIGD4Q8IY51 512 aa13.21□□□□□ -0.29
COL6A1-207ENST00000612273 ZNF614Q8N883 585 aa13.21□□□□□ -0.29
COL6A1-207ENST00000612273 PHF21AQ96BD5 680 aa13.21□□□□□ -0.29
COL6A1-207ENST00000612273 RSPRY1Q96DX4 576 aa13.21□□□□□ -0.29
COL6A1-207ENST00000612273 CNRIP1Q96F85 164 aaPredicted RBP13.21□□□□□ -0.29
COL6A1-207ENST00000612273 DDX31Q9H8H2 851 aaKnown RBP13.21□□□□□ -0.29
COL6A1-207ENST00000612273 ISG20L2Q9H9L3 353 aaKnown RBP13.21□□□□□ -0.29
COL6A1-207ENST00000612273 B3GAT2Q9NPZ5 323 aa13.21□□□□□ -0.29
COL6A1-207ENST00000612273 MBNL1Q9NR56 388 aaKnown RBP13.21□□□□□ -0.29
COL6A1-207ENST00000612273 LIMS3P0CW19 117 aa13.21□□□□□ -0.3
COL6A1-207ENST00000612273 LIMS4P0CW20 117 aa13.21□□□□□ -0.3
COL6A1-207ENST00000612273 DDX5P17844 614 aaKnown RBP13.21□□□□□ -0.3
COL6A1-207ENST00000612273 RGS8P57771 180 aaPredicted RBP13.21□□□□□ -0.3
COL6A1-207ENST00000612273 CDK10Q15131 360 aa13.21□□□□□ -0.3
COL6A1-207ENST00000612273 ZNF77Q15935 545 aa13.21□□□□□ -0.3
COL6A1-207ENST00000612273 NOXA1Q86UR1 476 aa13.21□□□□□ -0.3
COL6A1-207ENST00000612273 PCNPQ8WW12 178 aaKnown RBP13.21□□□□□ -0.3
COL6A1-207ENST00000612273 SPRYD4Q8WW59 207 aaPredicted RBP13.21□□□□□ -0.3
COL6A1-207ENST00000612273 OR51V1Q9H2C8 321 aa13.21□□□□□ -0.3
COL6A1-207ENST00000612273 BEX1Q9HBH7 125 aa13.21□□□□□ -0.3
COL6A1-207ENST00000612273 GALNT9Q9HCQ5 603 aa13.21□□□□□ -0.3
COL6A1-207ENST00000612273 DIMT1Q9UNQ2 313 aaKnown RBP13.21□□□□□ -0.3
COL6A1-207ENST00000612273 ZFR2Q9UPR6 939 aaKnown RBP13.21□□□□□ -0.3
COL6A1-207ENST00000612273 A0A1W2PR48 441 aa13.2□□□□□ -0.3
COL6A1-207ENST00000612273 ZNF860A6NHJ4 632 aa13.2□□□□□ -0.3
COL6A1-207ENST00000612273 PIPP12273 146 aaPredicted RBP13.2□□□□□ -0.3
COL6A1-207ENST00000612273 CTNNB1P35222 781 aa13.2□□□□□ -0.3
COL6A1-207ENST00000612273 PCBP4P57723 403 aaKnown RBP13.2□□□□□ -0.3
COL6A1-207ENST00000612273 SNRPNP63162 240 aaKnown RBP13.2□□□□□ -0.3
COL6A1-207ENST00000612273 FUT5Q11128 374 aa13.2□□□□□ -0.3
COL6A1-207ENST00000612273 ZNF234Q14588 700 aa13.2□□□□□ -0.3
COL6A1-207ENST00000612273 WSCD2Q2TBF2 565 aa13.2□□□□□ -0.3
COL6A1-207ENST00000612273 IKBIPQ70UQ0 350 aa13.2□□□□□ -0.3
COL6A1-207ENST00000612273 SYT9Q86SS6 491 aa13.2□□□□□ -0.3
COL6A1-207ENST00000612273 VWA5B2Q8N398 1253 aa13.2□□□□□ -0.3
COL6A1-207ENST00000612273 TMEM255BQ8WV15 326 aa13.2□□□□□ -0.3
COL6A1-207ENST00000612273 H2AFY2Q9P0M6 372 aaPredicted RBP13.2□□□□□ -0.3
COL6A1-207ENST00000612273 DEC1Q9P2X7 70 aa13.2□□□□□ -0.3
COL6A1-207ENST00000612273 NOTOA8MTQ0 251 aa13.2□□□□□ -0.3
COL6A1-207ENST00000612273 MAGEB4O15481 346 aaPredicted RBP13.2□□□□□ -0.3
COL6A1-207ENST00000612273 GKN3PP0CG01 181 aa13.2□□□□□ -0.3
COL6A1-207ENST00000612273 PPM1AP35813 382 aa13.2□□□□□ -0.3
COL6A1-207ENST00000612273 SLC9A5Q14940 896 aa13.2□□□□□ -0.3
COL6A1-207ENST00000612273 GLYR1Q49A26 553 aaPredicted RBP13.2□□□□□ -0.3
COL6A1-207ENST00000612273 LCN1P1Q5VSP4 162 aa13.2□□□□□ -0.3
COL6A1-207ENST00000612273 LCTLQ6UWM7 567 aa13.2□□□□□ -0.3
COL6A1-207ENST00000612273 PLEKHM3Q6ZWE6 761 aa13.2□□□□□ -0.3
COL6A1-207ENST00000612273 CPOQ8IVL8 374 aa13.2□□□□□ -0.3
COL6A1-207ENST00000612273 KLHDC8AQ8IYD2 350 aa13.2□□□□□ -0.3
COL6A1-207ENST00000612273 ZCCHC10Q8TBK6 192 aa13.2□□□□□ -0.3
COL6A1-207ENST00000612273 POF1BQ8WVV4 589 aa13.2□□□□□ -0.3
COL6A1-207ENST00000612273 POLDIP3Q9BY77 421 aaKnown RBP13.2□□□□□ -0.3
COL6A1-207ENST00000612273 AICDAQ9GZX7 198 aa13.2□□□□□ -0.3
COL6A1-207ENST00000612273 MCUBQ9NWR8 336 aa13.2□□□□□ -0.3
COL6A1-207ENST00000612273 TRAV6A0A075B6T7 132 aa13.19□□□□□ -0.3
COL6A1-207ENST00000612273 FAM172BPA6NC97 362 aa13.19□□□□□ -0.3
COL6A1-207ENST00000612273 MEN1O00255 615 aa13.19□□□□□ -0.3
COL6A1-207ENST00000612273 PAHP00439 452 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms