RNA–Protein interactions for RNA: ENST00000612195.4

TVP23A-210, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TVP23A, Length 1,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-210ENST00000612195 NDRG3Q9UGV2 375 aa15.17■□□□□ 0.02
TVP23A-210ENST00000612195 PACSIN3Q9UKS6 424 aa15.17■□□□□ 0.02
TVP23A-210ENST00000612195 EIF3LQ9Y262 564 aaKnown RBP15.17■□□□□ 0.02
TVP23A-210ENST00000612195 ZNF780BQ9Y6R6 833 aa15.17■□□□□ 0.02
TVP23A-210ENST00000612195 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.16■□□□□ 0.02
TVP23A-210ENST00000612195 A0A1W2PNV4 684 aa15.16■□□□□ 0.02
TVP23A-210ENST00000612195 ZIC3O60481 467 aa15.16■□□□□ 0.02
TVP23A-210ENST00000612195 TNFSF13O75888 250 aa15.16■□□□□ 0.02
TVP23A-210ENST00000612195 ZNF708P17019 499 aa15.16■□□□□ 0.02
TVP23A-210ENST00000612195 TSPAN8P19075 237 aa15.16■□□□□ 0.02
TVP23A-210ENST00000612195 CHMP24386 653 aa15.16■□□□□ 0.02
TVP23A-210ENST00000612195 CPOXP36551 454 aa15.16■□□□□ 0.02
TVP23A-210ENST00000612195 MAGEA12P43365 314 aa15.16■□□□□ 0.02
TVP23A-210ENST00000612195 CDH13P55290 713 aa15.16■□□□□ 0.02
TVP23A-210ENST00000612195 EEF1A1P68104 462 aaKnown RBP15.16■□□□□ 0.02
TVP23A-210ENST00000612195 SLC7A5Q01650 507 aa15.16■□□□□ 0.02
TVP23A-210ENST00000612195 FAM27E3Q08E93 113 aa15.16■□□□□ 0.02
TVP23A-210ENST00000612195 ZNF628Q5EBL2 1059 aa15.16■□□□□ 0.02
TVP23A-210ENST00000612195 EEF1A1P5Q5VTE0 462 aa15.16■□□□□ 0.02
TVP23A-210ENST00000612195 SCIMPQ6UWF3 145 aa15.16■□□□□ 0.02
TVP23A-210ENST00000612195 CCDC116Q8IYX3 515 aa15.16■□□□□ 0.02
TVP23A-210ENST00000612195 C1orf52Q8N6N3 182 aaKnown RBP15.16■□□□□ 0.02
TVP23A-210ENST00000612195 SLC35A4Q96G79 324 aa15.16■□□□□ 0.02
TVP23A-210ENST00000612195 HBEGFQ99075 208 aa15.16■□□□□ 0.02
TVP23A-210ENST00000612195 FAIM2Q9BWQ8 316 aa15.16■□□□□ 0.02
TVP23A-210ENST00000612195 ACSS3Q9H6R3 686 aa15.16■□□□□ 0.02
TVP23A-210ENST00000612195 ZDHHC18Q9NUE0 388 aa15.16■□□□□ 0.02
TVP23A-210ENST00000612195 NINJ2Q9NZG7 142 aa15.16■□□□□ 0.02
TVP23A-210ENST00000612195 C6orf203Q9P0P8 240 aaPredicted RBP15.16■□□□□ 0.02
TVP23A-210ENST00000612195 DKKL1Q9UK85 242 aa15.16■□□□□ 0.02
TVP23A-210ENST00000612195 UTS2RQ9UKP6 389 aa15.16■□□□□ 0.02
TVP23A-210ENST00000612195 SNX6Q9UNH7 406 aa15.16■□□□□ 0.02
TVP23A-210ENST00000612195 TESMINQ9Y4I5 508 aa15.16■□□□□ 0.02
TVP23A-210ENST00000612195 WIF1Q9Y5W5 379 aa15.16■□□□□ 0.02
TVP23A-210ENST00000612195 B4DXG7 233 aa15.15■□□□□ 0.02
TVP23A-210ENST00000612195 TSPAN2O60636 221 aa15.15■□□□□ 0.02
TVP23A-210ENST00000612195 OTCP00480 354 aa15.15■□□□□ 0.02
TVP23A-210ENST00000612195 RPS17P08708 135 aaKnown RBP15.15■□□□□ 0.02
TVP23A-210ENST00000612195 CT45A8P0DMV1 189 aa15.15■□□□□ 0.02
TVP23A-210ENST00000612195 CT45A9P0DMV2 189 aa15.15■□□□□ 0.02
TVP23A-210ENST00000612195 PHBP35232 272 aa15.15■□□□□ 0.02
TVP23A-210ENST00000612195 CORO7P57737 925 aa15.15■□□□□ 0.02
TVP23A-210ENST00000612195 TRA2BP62995 288 aaKnown RBP15.15■□□□□ 0.02
TVP23A-210ENST00000612195 CT45A2Q5DJT8 189 aa15.15■□□□□ 0.02
TVP23A-210ENST00000612195 ZNF483Q8TF39 744 aaPredicted RBP15.15■□□□□ 0.02
TVP23A-210ENST00000612195 KAT2AQ92830 837 aa15.15■□□□□ 0.02
TVP23A-210ENST00000612195 BTBD9Q96Q07 612 aa15.15■□□□□ 0.02
TVP23A-210ENST00000612195 PFDN4Q9NQP4 134 aa15.15■□□□□ 0.02
TVP23A-210ENST00000612195 NMRK1Q9NWW6 199 aa15.15■□□□□ 0.02
TVP23A-210ENST00000612195 ZNF225Q9UK10 706 aa15.15■□□□□ 0.02
TVP23A-210ENST00000612195 DLGAP4Q9Y2H0 992 aa15.15■□□□□ 0.02
TVP23A-210ENST00000612195 MRPS18CQ9Y3D5 142 aaKnown RBP15.15■□□□□ 0.02
TVP23A-210ENST00000612195 MSTNO14793 375 aa15.14■□□□□ 0.01
TVP23A-210ENST00000612195 SIAH2O43255 324 aa15.14■□□□□ 0.01
TVP23A-210ENST00000612195 ARHGEF9O43307 516 aa15.14■□□□□ 0.01
TVP23A-210ENST00000612195 HCRTR2O43614 444 aa15.14■□□□□ 0.01
TVP23A-210ENST00000612195 ABCB7O75027 752 aa15.14■□□□□ 0.01
TVP23A-210ENST00000612195 BCAS2O75934 225 aaPredicted RBP15.14■□□□□ 0.01
TVP23A-210ENST00000612195 SMNDC1O75940 238 aaKnown RBP eCLIP15.14■□□□□ 0.01
TVP23A-210ENST00000612195 ESRRBO95718 433 aa15.14■□□□□ 0.01
TVP23A-210ENST00000612195 HEXAP06865 529 aa15.14■□□□□ 0.01
TVP23A-210ENST00000612195 GRK2P25098 689 aa15.14■□□□□ 0.01
TVP23A-210ENST00000612195 DPP4P27487 766 aa15.14■□□□□ 0.01
TVP23A-210ENST00000612195 GAS1P54826 345 aa15.14■□□□□ 0.01
TVP23A-210ENST00000612195 EFR3AQ14156 821 aa15.14■□□□□ 0.01
TVP23A-210ENST00000612195 TSNAXIP1Q2TAA8 658 aa15.14■□□□□ 0.01
TVP23A-210ENST00000612195 Q5PR19 223 aa15.14■□□□□ 0.01
TVP23A-210ENST00000612195 TCHHL1Q5QJ38 904 aaPredicted RBP15.14■□□□□ 0.01
TVP23A-210ENST00000612195 NPSR1Q6W5P4 371 aa15.14■□□□□ 0.01
TVP23A-210ENST00000612195 LARP4Q71RC2 724 aaKnown RBP eCLIP15.14■□□□□ 0.01
TVP23A-210ENST00000612195 P3H2Q8IVL5 708 aa15.14■□□□□ 0.01
TVP23A-210ENST00000612195 CNEP1R1Q8N9A8 125 aa15.14■□□□□ 0.01
TVP23A-210ENST00000612195 OR9A2Q8NGT5 310 aa15.14■□□□□ 0.01
TVP23A-210ENST00000612195 ZNF675Q8TD23 568 aa15.14■□□□□ 0.01
TVP23A-210ENST00000612195 ZNF592Q92610 1267 aa15.14■□□□□ 0.01
TVP23A-210ENST00000612195 STARD4Q96DR4 205 aa15.14■□□□□ 0.01
TVP23A-210ENST00000612195 ARSGQ96EG1 525 aa15.14■□□□□ 0.01
TVP23A-210ENST00000612195 VSTM2LQ96N03 204 aa15.14■□□□□ 0.01
TVP23A-210ENST00000612195 WFIKKN1Q96NZ8 548 aa15.14■□□□□ 0.01
TVP23A-210ENST00000612195 MRPL57Q9BQC6 102 aaKnown RBP15.14■□□□□ 0.01
TVP23A-210ENST00000612195 KLHL28Q9NXS3 571 aa15.14■□□□□ 0.01
TVP23A-210ENST00000612195 VPS29Q9UBQ0 182 aa15.14■□□□□ 0.01
TVP23A-210ENST00000612195 C17orf51A8MQB3 221 aa15.13■□□□□ 0.01
TVP23A-210ENST00000612195 DEFB108AA8MXU0 73 aa15.13■□□□□ 0.01
TVP23A-210ENST00000612195 CTIFO43310 598 aaKnown RBP15.13■□□□□ 0.01
TVP23A-210ENST00000612195 SMPD2O60906 423 aa15.13■□□□□ 0.01
TVP23A-210ENST00000612195 OR4F21O95013 312 aa15.13■□□□□ 0.01
TVP23A-210ENST00000612195 LY6G6DO95868 133 aa15.13■□□□□ 0.01
TVP23A-210ENST00000612195 INHBAP08476 426 aa15.13■□□□□ 0.01
TVP23A-210ENST00000612195 IL3P08700 152 aa15.13■□□□□ 0.01
TVP23A-210ENST00000612195 SBK3P0C264 359 aa15.13■□□□□ 0.01
TVP23A-210ENST00000612195 COL6A2P12110 1019 aa15.13■□□□□ 0.01
TVP23A-210ENST00000612195 IL12BP29460 328 aa15.13■□□□□ 0.01
TVP23A-210ENST00000612195 CASQ1P31415 396 aa15.13■□□□□ 0.01
TVP23A-210ENST00000612195 KRT20P35900 424 aa15.13■□□□□ 0.01
TVP23A-210ENST00000612195 B3GALT5-AS1P59052 145 aa15.13■□□□□ 0.01
TVP23A-210ENST00000612195 BCL2A1Q16548 175 aa15.13■□□□□ 0.01
TVP23A-210ENST00000612195 VWA1Q6PCB0 445 aa15.13■□□□□ 0.01
TVP23A-210ENST00000612195 P4HA3Q7Z4N8 544 aa15.13■□□□□ 0.01
TVP23A-210ENST00000612195 TMEM151AQ8N4L1 468 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms