RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 ETFBKMTQ8IXQ9 262 aa11.26□□□□□ -0.61
TP53-220ENST00000610623 OR4N4Q8N0Y3 316 aa11.26□□□□□ -0.61
TP53-220ENST00000610623 OR2T35Q8NGX2 323 aa11.26□□□□□ -0.61
TP53-220ENST00000610623 CXorf40BQ96DE9 158 aa11.26□□□□□ -0.61
TP53-220ENST00000610623 MYEOVQ96EZ4 313 aa11.26□□□□□ -0.61
TP53-220ENST00000610623 LRR1Q96L50 414 aa11.26□□□□□ -0.61
TP53-220ENST00000610623 VN1R3Q9BXE9 311 aa11.26□□□□□ -0.61
TP53-220ENST00000610623 RNF32Q9H0A6 362 aa11.26□□□□□ -0.61
TP53-220ENST00000610623 SERHL2Q9H4I8 314 aa11.26□□□□□ -0.61
TP53-220ENST00000610623 ZNF624Q9P2J8 865 aaPredicted RBP11.26□□□□□ -0.61
TP53-220ENST00000610623 PPIEQ9UNP9 301 aaKnown RBP11.26□□□□□ -0.61
TP53-220ENST00000610623 PRSS21Q9Y6M0 314 aa11.26□□□□□ -0.61
TP53-220ENST00000610623 ZFP37Q9Y6Q3 630 aaPredicted RBP11.26□□□□□ -0.61
TP53-220ENST00000610623 COL4A6Q14031 1691 aa11.26□□□□□ -0.61
TP53-220ENST00000610623 FAM227AF5H4B4 570 aa11.25□□□□□ -0.61
TP53-220ENST00000610623 GABRPO00591 440 aa11.25□□□□□ -0.61
TP53-220ENST00000610623 COCHO43405 550 aa11.25□□□□□ -0.61
TP53-220ENST00000610623 LATS1O95835 1130 aa11.25□□□□□ -0.61
TP53-220ENST00000610623 FGF2P09038 288 aa11.25□□□□□ -0.61
TP53-220ENST00000610623 CCL5P13501 91 aa11.25□□□□□ -0.61
TP53-220ENST00000610623 AOAHP28039 575 aa11.25□□□□□ -0.61
TP53-220ENST00000610623 ACSL1P33121 698 aa11.25□□□□□ -0.61
TP53-220ENST00000610623 SLC6A12P48065 614 aa11.25□□□□□ -0.61
TP53-220ENST00000610623 VSX2P58304 361 aaPredicted RBP11.25□□□□□ -0.61
TP53-220ENST00000610623 TAF12Q16514 161 aa11.25□□□□□ -0.61
TP53-220ENST00000610623 SPDYE7PQ495Y7 208 aa11.25□□□□□ -0.61
TP53-220ENST00000610623 FAM198BQ6UWH4 519 aa11.25□□□□□ -0.61
TP53-220ENST00000610623 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.25□□□□□ -0.61
TP53-220ENST00000610623 KRT74Q7RTS7 529 aa11.25□□□□□ -0.61
TP53-220ENST00000610623 KANSL1Q7Z3B3 1105 aa11.25□□□□□ -0.61
TP53-220ENST00000610623 DEFB128Q7Z7B8 93 aa11.25□□□□□ -0.61
TP53-220ENST00000610623 OAFQ86UD1 273 aa11.25□□□□□ -0.61
TP53-220ENST00000610623 CLDN19Q8N6F1 224 aa11.25□□□□□ -0.61
TP53-220ENST00000610623 KCTD12Q96CX2 325 aaKnown RBP11.25□□□□□ -0.61
TP53-220ENST00000610623 HIST1H2AHQ96KK5 128 aa11.25□□□□□ -0.61
TP53-220ENST00000610623 SFXN2Q96NB2 322 aa11.25□□□□□ -0.61
TP53-220ENST00000610623 ZNF558Q96NG5 402 aa11.25□□□□□ -0.61
TP53-220ENST00000610623 SLC35A5Q9BS91 424 aa11.25□□□□□ -0.61
TP53-220ENST00000610623 C1QTNF6Q9BXI9 259 aa11.25□□□□□ -0.61
TP53-220ENST00000610623 GPR63Q9BZJ6 419 aa11.25□□□□□ -0.61
TP53-220ENST00000610623 BHLHE41Q9C0J9 482 aaPredicted RBP11.25□□□□□ -0.61
TP53-220ENST00000610623 OSGEPL1Q9H4B0 414 aa11.25□□□□□ -0.61
TP53-220ENST00000610623 SPATA6Q9NWH7 488 aaPredicted RBP11.25□□□□□ -0.61
TP53-220ENST00000610623 ASB6Q9NWX5 421 aa11.25□□□□□ -0.61
TP53-220ENST00000610623 MAFFQ9ULX9 164 aa11.25□□□□□ -0.61
TP53-220ENST00000610623 FCF1Q9Y324 198 aaKnown RBP11.25□□□□□ -0.61
TP53-220ENST00000610623 PLXNA4Q9HCM2 1894 aa11.25□□□□□ -0.61
TP53-220ENST00000610623 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.25□□□□□ -0.61
TP53-220ENST00000610623 C2orf78A6NCI8 922 aa11.25□□□□□ -0.61
TP53-220ENST00000610623 H3BNC9 293 aa11.25□□□□□ -0.61
TP53-220ENST00000610623 LRRTM2O43300 516 aa11.25□□□□□ -0.61
TP53-220ENST00000610623 SSNA1O43805 119 aa11.25□□□□□ -0.61
TP53-220ENST00000610623 GMDSO60547 372 aa11.25□□□□□ -0.61
TP53-220ENST00000610623 UGDHO60701 494 aa11.25□□□□□ -0.61
TP53-220ENST00000610623 STC2O76061 302 aa11.25□□□□□ -0.61
TP53-220ENST00000610623 GJB5O95377 273 aa11.25□□□□□ -0.61
TP53-220ENST00000610623 RHOCP08134 193 aa11.25□□□□□ -0.61
TP53-220ENST00000610623 TFPIP10646 304 aa11.25□□□□□ -0.61
TP53-220ENST00000610623 RPL17P18621 184 aaKnown RBP11.25□□□□□ -0.61
TP53-220ENST00000610623 ELAVL4P26378 380 aaKnown RBP11.25□□□□□ -0.61
TP53-220ENST00000610623 LIM2P55344 173 aa11.25□□□□□ -0.61
TP53-220ENST00000610623 ERVFC1P60507 584 aa11.25□□□□□ -0.61
TP53-220ENST00000610623 EFNB1P98172 346 aa11.25□□□□□ -0.61
TP53-220ENST00000610623 FOXK2Q01167 660 aa11.25□□□□□ -0.61
TP53-220ENST00000610623 DHODHQ02127 395 aa11.25□□□□□ -0.61
TP53-220ENST00000610623 TAP2Q03519 686 aa11.25□□□□□ -0.61
TP53-220ENST00000610623 ZNF177Q13360 481 aaPredicted RBP11.25□□□□□ -0.61
TP53-220ENST00000610623 ST3GAL2Q16842 350 aa11.25□□□□□ -0.61
TP53-220ENST00000610623 ARMC12Q5T9G4 340 aa11.25□□□□□ -0.61
TP53-220ENST00000610623 C1orf53Q5VUE5 145 aa11.25□□□□□ -0.61
TP53-220ENST00000610623 LIPJQ5W064 366 aa11.25□□□□□ -0.61
TP53-220ENST00000610623 PYHIN1Q6K0P9 492 aa11.25□□□□□ -0.61
TP53-220ENST00000610623 ZNF783Q6ZMS7 281 aa11.25□□□□□ -0.61
TP53-220ENST00000610623 IKBIPQ70UQ0 350 aa11.25□□□□□ -0.61
TP53-220ENST00000610623 DNAJB7Q7Z6W7 309 aaPredicted RBP11.25□□□□□ -0.61
TP53-220ENST00000610623 CFAP52Q8N1V2 620 aa11.25□□□□□ -0.61
TP53-220ENST00000610623 EIF4E3Q8N5X7 224 aaKnown RBP11.25□□□□□ -0.61
TP53-220ENST00000610623 ZNF485Q8NCK3 441 aa11.25□□□□□ -0.61
TP53-220ENST00000610623 HSD17B8Q92506 261 aa11.25□□□□□ -0.61
TP53-220ENST00000610623 ATOH1Q92858 354 aaPredicted RBP11.25□□□□□ -0.61
TP53-220ENST00000610623 PKP4Q99569 1192 aa11.25□□□□□ -0.61
TP53-220ENST00000610623 NPAS1Q99742 590 aa11.25□□□□□ -0.61
TP53-220ENST00000610623 C7orf50Q9BRJ6 194 aaKnown RBP11.25□□□□□ -0.61
TP53-220ENST00000610623 BRD7Q9NPI1 651 aa11.25□□□□□ -0.61
TP53-220ENST00000610623 HPF1Q9NWY4 346 aa11.25□□□□□ -0.61
TP53-220ENST00000610623 GULP1Q9UBP9 304 aa11.25□□□□□ -0.61
TP53-220ENST00000610623 YIPF1Q9Y548 306 aa11.25□□□□□ -0.61
TP53-220ENST00000610623 SHISA3A0PJX4 238 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 G3V3Q6 166 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 PRRG1O14668 218 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 PRODHO43272 600 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 CHST10O43529 356 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 HIST1H2AGP0C0S8 130 aaPredicted RBP11.24□□□□□ -0.61
TP53-220ENST00000610623 H2AFB2P0C5Z0 115 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 ARAFP10398 606 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 HSD3B1P14060 373 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 DRD2P14416 443 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 HIST1H2ADP20671 130 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 CORO1AP31146 461 aaKnown RBP11.24□□□□□ -0.61
TP53-220ENST00000610623 TLE2Q04725 743 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms