RNA–Protein interactions for RNA: ENST00000606769.1

SNORA28-201, Transcript of small nucleolar RNA, H/ACA box 28, humanhuman

BASIC

Gene SNORA28, Length 126 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA28-201ENST00000606769 TRIM9Q9C026 710 aa1.18□□□□□ -2.22
SNORA28-201ENST00000606769 CCSER1Q9C0I3 900 aa1.18□□□□□ -2.22
SNORA28-201ENST00000606769 DDX47Q9H0S4 455 aaKnown RBP1.18□□□□□ -2.22
SNORA28-201ENST00000606769 RNF41Q9H4P4 317 aaPredicted RBP1.18□□□□□ -2.22
SNORA28-201ENST00000606769 TNFRSF19Q9NS68 423 aa1.18□□□□□ -2.22
SNORA28-201ENST00000606769 ABCC13Q9NSE7 274 aa1.18□□□□□ -2.22
SNORA28-201ENST00000606769 FAM120CQ9NX05 1096 aaKnown RBP1.18□□□□□ -2.22
SNORA28-201ENST00000606769 ERVK-18Q9QC07 812 aa1.18□□□□□ -2.22
SNORA28-201ENST00000606769 P2RX2Q9UBL9 471 aa1.18□□□□□ -2.22
SNORA28-201ENST00000606769 CLIP2Q9UDT6 1046 aa1.18□□□□□ -2.22
SNORA28-201ENST00000606769 PRODH2Q9UF12 536 aa1.18□□□□□ -2.22
SNORA28-201ENST00000606769 DUSP12Q9UNI6 340 aa1.18□□□□□ -2.22
SNORA28-201ENST00000606769 MTF2Q9Y483 593 aaPredicted RBP1.18□□□□□ -2.22
SNORA28-201ENST00000606769 USP16Q9Y5T5 823 aa1.18□□□□□ -2.22
SNORA28-201ENST00000606769 KIF25-AS1Q9Y6Z4 181 aa1.18□□□□□ -2.22
SNORA28-201ENST00000606769 RPGRIP1LQ68CZ1 1315 aa1.17□□□□□ -2.22
SNORA28-201ENST00000606769 NPIPA5A0A0B4J1W7 369 aa1.17□□□□□ -2.22
SNORA28-201ENST00000606769 LRIT2A6NDA9 550 aa1.17□□□□□ -2.22
SNORA28-201ENST00000606769 ZSCAN5BA6NJL1 495 aa1.17□□□□□ -2.22
SNORA28-201ENST00000606769 NPIPA5E9PKD4 350 aa1.17□□□□□ -2.22
SNORA28-201ENST00000606769 PDXKO00764 312 aa1.17□□□□□ -2.22
SNORA28-201ENST00000606769 CHADO15335 359 aa1.17□□□□□ -2.22
SNORA28-201ENST00000606769 BUB1O43683 1085 aa1.17□□□□□ -2.22
SNORA28-201ENST00000606769 NDUFA7O95182 113 aa1.17□□□□□ -2.22
SNORA28-201ENST00000606769 GJB5O95377 273 aa1.17□□□□□ -2.22
SNORA28-201ENST00000606769 P0C879 139 aa1.17□□□□□ -2.22
SNORA28-201ENST00000606769 CT45A10P0DMU9 189 aa1.17□□□□□ -2.22
SNORA28-201ENST00000606769 PVRP15151 417 aa1.17□□□□□ -2.22
SNORA28-201ENST00000606769 GAP43P17677 238 aa1.17□□□□□ -2.22
SNORA28-201ENST00000606769 XRCC1P18887 633 aaPredicted RBP1.17□□□□□ -2.22
SNORA28-201ENST00000606769 DNAJB1P25685 340 aa1.17□□□□□ -2.22
SNORA28-201ENST00000606769 PTPN6P29350 595 aa1.17□□□□□ -2.22
SNORA28-201ENST00000606769 RPL4P36578 427 aaKnown RBP1.17□□□□□ -2.22
SNORA28-201ENST00000606769 MAGEA4P43358 317 aa1.17□□□□□ -2.22
SNORA28-201ENST00000606769 MEOX2P50222 304 aa1.17□□□□□ -2.22
SNORA28-201ENST00000606769 RPS6P62753 249 aaKnown RBP1.17□□□□□ -2.22
SNORA28-201ENST00000606769 MYBPC1Q00872 1141 aa1.17□□□□□ -2.22
SNORA28-201ENST00000606769 WASHC5Q12768 1159 aa1.17□□□□□ -2.22
SNORA28-201ENST00000606769 TFDP1Q14186 410 aa1.17□□□□□ -2.22
SNORA28-201ENST00000606769 SMC1AQ14683 1233 aaKnown RBP1.17□□□□□ -2.22
SNORA28-201ENST00000606769 KARSQ15046 597 aaKnown RBP1.17□□□□□ -2.22
SNORA28-201ENST00000606769 SHROOM1Q2M3G4 852 aaPredicted RBP1.17□□□□□ -2.22
SNORA28-201ENST00000606769 PAN3Q58A45 887 aaKnown RBP1.17□□□□□ -2.22
SNORA28-201ENST00000606769 LDLRAP1Q5SW96 308 aa1.17□□□□□ -2.22
SNORA28-201ENST00000606769 IL23RQ5VWK5 629 aa1.17□□□□□ -2.22
SNORA28-201ENST00000606769 PRR5LQ6MZQ0 368 aa1.17□□□□□ -2.22
SNORA28-201ENST00000606769 VITQ6UXI7 678 aa1.17□□□□□ -2.22
SNORA28-201ENST00000606769 APOOLQ6UXV4 268 aa1.17□□□□□ -2.22
SNORA28-201ENST00000606769 BAIAP2L2Q6UXY1 529 aa1.17□□□□□ -2.22
SNORA28-201ENST00000606769 CYS1Q717R9 158 aa1.17□□□□□ -2.22
SNORA28-201ENST00000606769 GOLGA7Q7Z5G4 137 aa1.17□□□□□ -2.22
SNORA28-201ENST00000606769 LHFPL4Q7Z7J7 247 aa1.17□□□□□ -2.22
SNORA28-201ENST00000606769 SERINC5Q86VE9 423 aa1.17□□□□□ -2.22
SNORA28-201ENST00000606769 RANBP3LQ86VV4 465 aaPredicted RBP1.17□□□□□ -2.22
SNORA28-201ENST00000606769 KDM8Q8N371 416 aa1.17□□□□□ -2.22
SNORA28-201ENST00000606769 HDDC3Q8N4P3 179 aa1.17□□□□□ -2.22
SNORA28-201ENST00000606769 ARL10Q8N8L6 244 aa1.17□□□□□ -2.22
SNORA28-201ENST00000606769 MLKLQ8NB16 471 aa1.17□□□□□ -2.22
SNORA28-201ENST00000606769 CNNM3Q8NE01 707 aa1.17□□□□□ -2.22
SNORA28-201ENST00000606769 FAM71CQ8NEG0 241 aa1.17□□□□□ -2.22
SNORA28-201ENST00000606769 OR52B4Q8NGK2 314 aa1.17□□□□□ -2.22
SNORA28-201ENST00000606769 NCLNQ969V3 563 aa1.17□□□□□ -2.22
SNORA28-201ENST00000606769 ZBED6CLQ96FA7 236 aaPredicted RBP1.17□□□□□ -2.22
SNORA28-201ENST00000606769 CCT8L2Q96SF2 557 aa1.17□□□□□ -2.22
SNORA28-201ENST00000606769 TMEM121Q9BTD3 319 aa1.17□□□□□ -2.22
SNORA28-201ENST00000606769 HCAR1Q9BXC0 346 aa1.17□□□□□ -2.22
SNORA28-201ENST00000606769 ABCG8Q9H221 673 aa1.17□□□□□ -2.22
SNORA28-201ENST00000606769 CALHM2Q9HA72 323 aa1.17□□□□□ -2.22
SNORA28-201ENST00000606769 RAI14Q9P0K7 980 aa1.17□□□□□ -2.22
SNORA28-201ENST00000606769 CCPG1Q9ULG6 757 aa1.17□□□□□ -2.22
SNORA28-201ENST00000606769 FZR1Q9UM11 496 aa1.17□□□□□ -2.22
SNORA28-201ENST00000606769 FOXJ3Q9UPW0 622 aa1.17□□□□□ -2.22
SNORA28-201ENST00000606769 MOKQ9UQ07 419 aa1.17□□□□□ -2.22
SNORA28-201ENST00000606769 NTNG1Q9Y2I2 539 aa1.17□□□□□ -2.22
SNORA28-201ENST00000606769 CLCA3PQ9Y6N3 262 aa1.17□□□□□ -2.22
SNORA28-201ENST00000606769 CUX2O14529 1486 aa1.17□□□□□ -2.22
SNORA28-201ENST00000606769 CFAP65Q6ZU64 1925 aaKnown RBP1.17□□□□□ -2.22
SNORA28-201ENST00000606769 ABCC4O15439 1325 aa1.16□□□□□ -2.22
SNORA28-201ENST00000606769 IGLV3-10A0A075B6K4 115 aa1.16□□□□□ -2.22
SNORA28-201ENST00000606769 A0A0J9YVX5 310 aa1.16□□□□□ -2.22
SNORA28-201ENST00000606769 KLF18A0A0U1RQI7 1052 aa1.16□□□□□ -2.22
SNORA28-201ENST00000606769 ARHGAP42A6NI28 874 aa1.16□□□□□ -2.22
SNORA28-201ENST00000606769 A8MX80 341 aa1.16□□□□□ -2.22
SNORA28-201ENST00000606769 B4DXG7 233 aa1.16□□□□□ -2.22
SNORA28-201ENST00000606769 K7ENP7 123 aa1.16□□□□□ -2.22
SNORA28-201ENST00000606769 SDHDO14521 159 aa1.16□□□□□ -2.22
SNORA28-201ENST00000606769 EI24O14681 340 aa1.16□□□□□ -2.22
SNORA28-201ENST00000606769 ALOX15BO15296 676 aa1.16□□□□□ -2.22
SNORA28-201ENST00000606769 NUDT21O43809 227 aaKnown RBP1.16□□□□□ -2.22
SNORA28-201ENST00000606769 PRPSAP2O60256 369 aa1.16□□□□□ -2.22
SNORA28-201ENST00000606769 HSF2BPO75031 334 aa1.16□□□□□ -2.22
SNORA28-201ENST00000606769 RHBDL1O75783 438 aa1.16□□□□□ -2.22
SNORA28-201ENST00000606769 DUSP14O95147 198 aaKnown RBP1.16□□□□□ -2.22
SNORA28-201ENST00000606769 MT-ATP6P00846 226 aa1.16□□□□□ -2.22
SNORA28-201ENST00000606769 JCHAINP01591 159 aa1.16□□□□□ -2.22
SNORA28-201ENST00000606769 STMN1P16949 149 aa1.16□□□□□ -2.22
SNORA28-201ENST00000606769 ZNF19P17023 458 aa1.16□□□□□ -2.22
SNORA28-201ENST00000606769 IGHV1-2P23083 117 aa1.16□□□□□ -2.22
SNORA28-201ENST00000606769 PPP2R1BP30154 601 aa1.16□□□□□ -2.22
SNORA28-201ENST00000606769 BRCC3P46736 316 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms