RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 VAMP1P23763 118 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 PRPH2P23942 346 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 DDX6P26196 483 aaKnown RBP eCLIP3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 ACRV1P26436 265 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 POU1F1P28069 291 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 LCN1P31025 176 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 SLC6A4P31645 630 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 ICAM3P32942 547 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 ACSL1P33121 698 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 EIF2S3P41091 472 aaKnown RBP3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 TNFSF9P41273 254 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 RPL35P42766 123 aaKnown RBP3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 BDKRB1P46663 353 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 ZNF81P51508 661 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 PLK1P53350 603 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 C21orf58P58505 322 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 CD81P60033 236 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 NANOS3P60323 173 aaKnown RBP3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 CDC42P60953 191 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 RAP2BP61225 183 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 RPS7P62081 194 aaKnown RBP3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 E2F1Q01094 437 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 SP2Q02086 613 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 IL10RBQ08334 325 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 ZNF155Q12901 538 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 GPR17Q13304 367 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 CRHR2Q13324 411 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 ILKQ13418 452 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 PICALMQ13492 652 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 GTF2H3Q13889 308 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 C1DQ13901 141 aaKnown RBP3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 BAATQ14032 418 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 FGL2Q14314 439 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 ZNF460Q14592 562 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 HLXQ14774 488 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 MED22Q15528 200 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 TAF1AQ15573 450 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 TAF12Q16514 161 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 SNAPC1Q16533 368 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 RNF151Q2KHN1 245 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 GSG1Q2KHT4 349 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 SOWAHAQ2M3V2 549 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 SUPT20HL1Q3ZLR7 823 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 CRY2Q49AN0 593 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 SYTL3Q4VX76 610 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 C4orf46Q504U0 113 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 ZRANB3Q5FWF4 1079 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 SLC22A10Q63ZE4 541 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 NADSYN1Q6IA69 706 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 FRMPD2BQ6IN97 320 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 SWSAP1Q6NVH7 229 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 CNIH2Q6PI25 160 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 RSPO2Q6UXX9 243 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 QSOX2Q6ZRP7 698 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 RASSF6Q6ZTQ3 369 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 IKBIPQ70UQ0 350 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 RPS27LQ71UM5 84 aaKnown RBP3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 OTOP2Q7RTS6 562 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 TMPRSS9Q7Z410 1059 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 GPR142Q7Z601 462 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 LHFPL3Q86UP9 236 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 TMEM17Q86X19 198 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 LAS2Q8IYD9 372 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 FBXO39Q8N4B4 442 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 SPATA6LQ8N4H0 392 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 C12orf45Q8N5I9 185 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 C7orf31Q8N865 590 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 ZNF565Q8N9K5 539 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 FAM46DQ8NEK8 389 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 TRPV1Q8NER1 839 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 OR56B4Q8NH76 319 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 IL31RAQ8NI17 732 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 TM9SF4Q92544 642 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 KCNJ9Q92806 393 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 TCEAL3Q969E4 200 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 TADA1Q96BN2 335 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 SIPA1Q96FS4 1042 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 PAWRQ96IZ0 340 aaKnown RBP3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 PIWIL1Q96J94 861 aaKnown RBP3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 ART5Q96L15 291 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 FCRL1Q96LA6 429 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 CMTM3Q96MX0 182 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 SLC2A13Q96QE2 648 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 ATF6BQ99941 703 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 UTP23Q9BRU9 249 aaKnown RBP3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 SYT17Q9BSW7 474 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 THAP7Q9BT49 309 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 AARSD1Q9BTE6 412 aaKnown RBP3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 SLC29A3Q9BZD2 475 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 NKX6-2Q9C056 277 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 ZDHHC5Q9C0B5 715 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 POLR1EQ9GZS1 481 aaKnown RBP3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 QRSL1Q9H0R6 528 aaKnown RBP3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 MROH8Q9H579 483 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 IKZF5Q9H5V7 419 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 PIF1Q9H611 641 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 C11orf49Q9H6J7 331 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 ZNF408Q9H9D4 720 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 RNF122Q9H9V4 155 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 RPF1Q9H9Y2 349 aaKnown RBP3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 369.3 ms