RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 GIMAP4Q9NUV9 329 aa8.05□□□□□ -1.12
SSBP4-208ENST00000600628 THAP1Q9NVV9 213 aa8.05□□□□□ -1.12
SSBP4-208ENST00000600628 GIN1Q9NXP7 522 aa8.05□□□□□ -1.12
SSBP4-208ENST00000600628 TAS2R9Q9NYW1 312 aa8.05□□□□□ -1.12
SSBP4-208ENST00000600628 FIS1Q9Y3D6 152 aa8.05□□□□□ -1.12
SSBP4-208ENST00000600628 PCDHGB3Q9Y5G1 929 aa8.05□□□□□ -1.12
SSBP4-208ENST00000600628 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.05□□□□□ -1.12
SSBP4-208ENST00000600628 PDZD2O15018 2839 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 HCFC1P51610 2035 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 E9PLN8 166 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 G3V3Y1 287 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 CCL21O00585 134 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 AQP7O14520 342 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 SDHDO14521 159 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 TP53I11O14683 189 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 PDPK1O15530 556 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 FADS1O60427 444 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 HCN1O60741 890 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 ZG16O60844 167 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 SKAP2O75563 359 aaPredicted RBP8.04□□□□□ -1.12
SSBP4-208ENST00000600628 NKX2-2O95096 273 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 SNX4O95219 450 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 HSPA4LO95757 839 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 HPNP05981 417 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 CELA3AP09093 270 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 LAMP1P11279 417 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 G6PDP11413 515 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 AGAP20933 346 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 PRPS1L1P21108 318 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 MAPK1P28482 360 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 NTSP30990 170 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 MAGEA5P43359 124 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 NCBP2P52298 156 aaKnown RBP eCLIP8.04□□□□□ -1.12
SSBP4-208ENST00000600628 CASP6P55212 293 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 CLDN8P56748 225 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 PPIAP62937 165 aaKnown RBP8.04□□□□□ -1.12
SSBP4-208ENST00000600628 PHC1P78364 1004 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 ADORA2A-AS1P86434 159 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 HSF1Q00613 529 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 CYP27C1Q4G0S4 372 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 TTMPQ5BVD1 217 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 NHSL2Q5HYW2 709 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 C6orf163Q5TEZ5 329 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 HLA-DQA1Q5Y7H0 255 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 TIGD3Q6B0B8 471 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 HIST2H2BCQ6DN03 193 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 ANKRD26P1Q6NSI1 321 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 ARHGAP11AQ6P4F7 1023 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 TMEM107Q6UX40 140 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 FAM47EQ6ZV65 393 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 TRILQ7L0X0 811 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 MAVSQ7Z434 540 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 R3HCC1LQ7Z5L2 792 aaKnown RBP8.04□□□□□ -1.12
SSBP4-208ENST00000600628 SLC22A16Q86VW1 577 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 FAM109AQ8N4B1 249 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 KRTCAP2Q8N6L1 136 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 FAM13CQ8NE31 585 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 OR7A2PQ8NGA2 310 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 OR4N2Q8NGD1 307 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 OR8J2Q8NGG1 315 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 CLHC1Q8NHS4 586 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 FAM57AQ8TBR7 257 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 AGR3Q8TD06 166 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 NUDT8Q8WV74 236 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 ITLN2Q8WWU7 325 aaPredicted RBP8.04□□□□□ -1.12
SSBP4-208ENST00000600628 GFM2Q969S9 779 aaKnown RBP8.04□□□□□ -1.12
SSBP4-208ENST00000600628 OMA1Q96E52 524 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 ZBED6CLQ96FA7 236 aaPredicted RBP8.04□□□□□ -1.12
SSBP4-208ENST00000600628 CCDC120Q96HB5 630 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 RILPQ96NA2 401 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 PHF12Q96QT6 1004 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 NODALQ96S42 347 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 VKORC1Q9BQB6 163 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 CENPHQ9H3R5 247 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 KCNK9Q9NPC2 374 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 MIEF1Q9NQG6 463 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 PNPOQ9NVS9 261 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 NOP53Q9NZM5 478 aaKnown RBP8.04□□□□□ -1.12
SSBP4-208ENST00000600628 BCAP29Q9UHQ4 241 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 TINAGQ9UJW2 476 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 MRPS18CQ9Y3D5 142 aaKnown RBP8.04□□□□□ -1.12
SSBP4-208ENST00000600628 LIPGQ9Y5X9 500 aa8.04□□□□□ -1.12
SSBP4-208ENST00000600628 INTS1Q8N201 2190 aaKnown RBP8.04□□□□□ -1.12
SSBP4-208ENST00000600628 DOCK7Q96N67 2140 aa8.03□□□□□ -1.12
SSBP4-208ENST00000600628 KIAA1549Q9HCM3 1950 aa8.03□□□□□ -1.12
SSBP4-208ENST00000600628 IGLV3-32A0A0A0MS00 114 aa8.03□□□□□ -1.12
SSBP4-208ENST00000600628 A0A1B0GTH9 108 aa8.03□□□□□ -1.12
SSBP4-208ENST00000600628 TFECO14948 347 aaPredicted RBP8.03□□□□□ -1.12
SSBP4-208ENST00000600628 SNPHO15079 494 aa8.03□□□□□ -1.12
SSBP4-208ENST00000600628 HDAC3O15379 428 aa8.03□□□□□ -1.12
SSBP4-208ENST00000600628 ZNHIT1O43257 154 aa8.03□□□□□ -1.12
SSBP4-208ENST00000600628 AKAP10O43572 662 aa8.03□□□□□ -1.12
SSBP4-208ENST00000600628 ICOSLGO75144 302 aa8.03□□□□□ -1.12
SSBP4-208ENST00000600628 COQ9O75208 318 aa8.03□□□□□ -1.12
SSBP4-208ENST00000600628 SASH3O75995 380 aa8.03□□□□□ -1.12
SSBP4-208ENST00000600628 LRATO95237 230 aa8.03□□□□□ -1.12
SSBP4-208ENST00000600628 IL33O95760 270 aa8.03□□□□□ -1.12
SSBP4-208ENST00000600628 NGFRP08138 427 aa8.03□□□□□ -1.12
SSBP4-208ENST00000600628 ALDOCP09972 364 aaKnown RBP8.03□□□□□ -1.12
SSBP4-208ENST00000600628 COL8A1P27658 744 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms