RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 CHERPQ8IWX8 916 aaKnown RBP12.71□□□□□ -0.37
UPF1-205ENST00000598209 LRRC34Q8IZ02 419 aa12.71□□□□□ -0.37
UPF1-205ENST00000598209 FAM109AQ8N4B1 249 aa12.71□□□□□ -0.37
UPF1-205ENST00000598209 HGDQ93099 445 aa12.71□□□□□ -0.37
UPF1-205ENST00000598209 COQ8BQ96D53 544 aa12.71□□□□□ -0.37
UPF1-205ENST00000598209 ZNF597Q96LX8 424 aa12.71□□□□□ -0.37
UPF1-205ENST00000598209 JSRP1Q96MG2 331 aaPredicted RBP12.71□□□□□ -0.37
UPF1-205ENST00000598209 RILPQ96NA2 401 aa12.71□□□□□ -0.37
UPF1-205ENST00000598209 NODALQ96S42 347 aa12.71□□□□□ -0.37
UPF1-205ENST00000598209 PRPF18Q99633 342 aaKnown RBP12.71□□□□□ -0.37
UPF1-205ENST00000598209 ANGPTL4Q9BY76 406 aa12.71□□□□□ -0.37
UPF1-205ENST00000598209 METTL7AQ9H8H3 244 aa12.71□□□□□ -0.37
UPF1-205ENST00000598209 ZDHHC11Q9H8X9 412 aa12.71□□□□□ -0.37
UPF1-205ENST00000598209 ZFP64Q9NPA5 681 aa12.71□□□□□ -0.37
UPF1-205ENST00000598209 PLSCR2Q9NRY7 297 aa12.71□□□□□ -0.37
UPF1-205ENST00000598209 SH3BGRL2Q9UJC5 107 aa12.71□□□□□ -0.37
UPF1-205ENST00000598209 ZNF835Q9Y2P0 537 aa12.71□□□□□ -0.37
UPF1-205ENST00000598209 OR10H1Q9Y4A9 318 aa12.71□□□□□ -0.37
UPF1-205ENST00000598209 USP9XQ93008 2570 aaPredicted RBP12.71□□□□□ -0.38
UPF1-205ENST00000598209 A0A1B0GTH9 108 aa12.7□□□□□ -0.38
UPF1-205ENST00000598209 A0A1W2PRB8 838 aa12.7□□□□□ -0.38
UPF1-205ENST00000598209 OR6C70A6NIJ9 312 aa12.7□□□□□ -0.38
UPF1-205ENST00000598209 LRRC3CA6NJW4 275 aa12.7□□□□□ -0.38
UPF1-205ENST00000598209 TRPC5OSA6NMA1 111 aa12.7□□□□□ -0.38
UPF1-205ENST00000598209 SLCO1B7G3V0H7 640 aa12.7□□□□□ -0.38
UPF1-205ENST00000598209 TSPAN2O60636 221 aa12.7□□□□□ -0.38
UPF1-205ENST00000598209 TRIM3O75382 744 aaPredicted RBP12.7□□□□□ -0.38
UPF1-205ENST00000598209 SNX4O95219 450 aa12.7□□□□□ -0.38
UPF1-205ENST00000598209 LDLRP01130 860 aa12.7□□□□□ -0.38
UPF1-205ENST00000598209 ABOP16442 354 aa12.7□□□□□ -0.38
UPF1-205ENST00000598209 IL12BP29460 328 aa12.7□□□□□ -0.38
UPF1-205ENST00000598209 KRT20P35900 424 aa12.7□□□□□ -0.38
UPF1-205ENST00000598209 CA7P43166 264 aa12.7□□□□□ -0.38
UPF1-205ENST00000598209 PRKAG1P54619 331 aa12.7□□□□□ -0.38
UPF1-205ENST00000598209 CASP6P55212 293 aa12.7□□□□□ -0.38
UPF1-205ENST00000598209 ZNHIT3Q15649 155 aaPredicted RBP12.7□□□□□ -0.38
UPF1-205ENST00000598209 C3AR1Q16581 482 aa12.7□□□□□ -0.38
UPF1-205ENST00000598209 TMEM198Q66K66 360 aa12.7□□□□□ -0.38
UPF1-205ENST00000598209 OGFOD2Q6N063 350 aa12.7□□□□□ -0.38
UPF1-205ENST00000598209 TMEM81Q6P7N7 255 aa12.7□□□□□ -0.38
UPF1-205ENST00000598209 PAOXQ6QHF9 649 aa12.7□□□□□ -0.38
UPF1-205ENST00000598209 Q6ZPB1 254 aaPredicted RBP12.7□□□□□ -0.38
UPF1-205ENST00000598209 SZRD1Q7Z422 152 aa12.7□□□□□ -0.38
UPF1-205ENST00000598209 FGD2Q7Z6J4 655 aa12.7□□□□□ -0.38
UPF1-205ENST00000598209 NATD1Q8N6N6 113 aa12.7□□□□□ -0.38
UPF1-205ENST00000598209 NUP43Q8NFH3 380 aa12.7□□□□□ -0.38
UPF1-205ENST00000598209 OR4N2Q8NGD1 307 aa12.7□□□□□ -0.38
UPF1-205ENST00000598209 CEP70Q8NHQ1 597 aa12.7□□□□□ -0.38
UPF1-205ENST00000598209 SLC35A4Q96G79 324 aa12.7□□□□□ -0.38
UPF1-205ENST00000598209 COL21A1Q96P44 957 aa12.7□□□□□ -0.38
UPF1-205ENST00000598209 ADOQ96SZ5 270 aa12.7□□□□□ -0.38
UPF1-205ENST00000598209 LMF2Q9BU23 707 aaKnown RBP12.7□□□□□ -0.38
UPF1-205ENST00000598209 DPY30Q9C005 99 aa12.7□□□□□ -0.38
UPF1-205ENST00000598209 C3orf14Q9HBI5 128 aa12.7□□□□□ -0.38
UPF1-205ENST00000598209 EQTNQ9NQ60 294 aa12.7□□□□□ -0.38
UPF1-205ENST00000598209 SIRT3Q9NTG7 399 aaPredicted RBP12.7□□□□□ -0.38
UPF1-205ENST00000598209 NTMQ9P121 344 aa12.7□□□□□ -0.38
UPF1-205ENST00000598209 MAPRE3Q9UPY8 281 aa12.7□□□□□ -0.38
UPF1-205ENST00000598209 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.69□□□□□ -0.38
UPF1-205ENST00000598209 GOLGA8QA0A0J9YX86 632 aa12.69□□□□□ -0.38
UPF1-205ENST00000598209 GOLGA8OA6NCC3 632 aa12.69□□□□□ -0.38
UPF1-205ENST00000598209 TTC36A6NLP5 189 aa12.69□□□□□ -0.38
UPF1-205ENST00000598209 GOLGA8NF8WBI6 632 aa12.69□□□□□ -0.38
UPF1-205ENST00000598209 EMC8O43402 210 aa12.69□□□□□ -0.38
UPF1-205ENST00000598209 ABCB7O75027 752 aa12.69□□□□□ -0.38
UPF1-205ENST00000598209 C6orf47O95873 294 aa12.69□□□□□ -0.38
UPF1-205ENST00000598209 CELA3AP09093 270 aa12.69□□□□□ -0.38
UPF1-205ENST00000598209 ALDOCP09972 364 aaKnown RBP12.69□□□□□ -0.38
UPF1-205ENST00000598209 RFPL3SP0C7P2 107 aa12.69□□□□□ -0.38
UPF1-205ENST00000598209 EPHA3P29320 983 aa12.69□□□□□ -0.38
UPF1-205ENST00000598209 PTGS2P35354 604 aa12.69□□□□□ -0.38
UPF1-205ENST00000598209 MASP1P48740 699 aa12.69□□□□□ -0.38
UPF1-205ENST00000598209 PNLIPRP2P54317 469 aa12.69□□□□□ -0.38
UPF1-205ENST00000598209 PER3P56645 1201 aa12.69□□□□□ -0.38
UPF1-205ENST00000598209 PPP2R2AP63151 447 aa12.69□□□□□ -0.38
UPF1-205ENST00000598209 GAB1Q13480 694 aa12.69□□□□□ -0.38
UPF1-205ENST00000598209 EFR3AQ14156 821 aa12.69□□□□□ -0.38
UPF1-205ENST00000598209 SLC10A1Q14973 349 aa12.69□□□□□ -0.38
UPF1-205ENST00000598209 PGS1Q32NB8 556 aa12.69□□□□□ -0.38
UPF1-205ENST00000598209 LSM12Q3MHD2 195 aaKnown RBP12.69□□□□□ -0.38
UPF1-205ENST00000598209 CYP27C1Q4G0S4 372 aa12.69□□□□□ -0.38
UPF1-205ENST00000598209 ARHGAP11AQ6P4F7 1023 aa12.69□□□□□ -0.38
UPF1-205ENST00000598209 CAMKMTQ7Z624 323 aa12.69□□□□□ -0.38
UPF1-205ENST00000598209 PACS2Q86VP3 889 aa12.69□□□□□ -0.38
UPF1-205ENST00000598209 PIWIL2Q8TC59 973 aaKnown RBP12.69□□□□□ -0.38
UPF1-205ENST00000598209 LRRC8CQ8TDW0 803 aa12.69□□□□□ -0.38
UPF1-205ENST00000598209 DYDC1Q8WWB3 177 aa12.69□□□□□ -0.38
UPF1-205ENST00000598209 OR5P2Q8WZ92 322 aa12.69□□□□□ -0.38
UPF1-205ENST00000598209 RELTQ969Z4 430 aa12.69□□□□□ -0.38
UPF1-205ENST00000598209 EFHD2Q96C19 240 aaPredicted RBP12.69□□□□□ -0.38
UPF1-205ENST00000598209 NTNG2Q96CW9 530 aa12.69□□□□□ -0.38
UPF1-205ENST00000598209 TMCO6Q96DC7 493 aa12.69□□□□□ -0.38
UPF1-205ENST00000598209 GIMAP5Q96F15 307 aa12.69□□□□□ -0.38
UPF1-205ENST00000598209 TMEM41AQ96HV5 264 aa12.69□□□□□ -0.38
UPF1-205ENST00000598209 MS4A4EQ96PG1 132 aa12.69□□□□□ -0.38
UPF1-205ENST00000598209 DUSP26Q9BV47 211 aa12.69□□□□□ -0.38
UPF1-205ENST00000598209 OSBPL11Q9BXB4 747 aa12.69□□□□□ -0.38
UPF1-205ENST00000598209 BHLHE41Q9C0J9 482 aaPredicted RBP12.69□□□□□ -0.38
UPF1-205ENST00000598209 WDR55Q9H6Y2 383 aaPredicted RBP12.69□□□□□ -0.38
UPF1-205ENST00000598209 ZNF703Q9H7S9 590 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms