RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 PDE9AO76083 593 aa10.19□□□□□ -0.78
LIG1-211ENST00000596457 SLITRK5O94991 958 aa10.19□□□□□ -0.78
LIG1-211ENST00000596457 UNC5CO95185 931 aa10.19□□□□□ -0.78
LIG1-211ENST00000596457 CT45A8P0DMV1 189 aa10.19□□□□□ -0.78
LIG1-211ENST00000596457 CT45A9P0DMV2 189 aa10.19□□□□□ -0.78
LIG1-211ENST00000596457 EDN3P14138 238 aa10.19□□□□□ -0.78
LIG1-211ENST00000596457 ZNF24P17028 368 aa10.19□□□□□ -0.78
LIG1-211ENST00000596457 S100A3P33764 101 aa10.19□□□□□ -0.78
LIG1-211ENST00000596457 GABRA3P34903 492 aa10.19□□□□□ -0.78
LIG1-211ENST00000596457 CCT3P49368 545 aaKnown RBP10.19□□□□□ -0.78
LIG1-211ENST00000596457 CLNS1AP54105 237 aaKnown RBP10.19□□□□□ -0.78
LIG1-211ENST00000596457 AQP5P55064 265 aa10.19□□□□□ -0.78
LIG1-211ENST00000596457 RPP38P78345 283 aaKnown RBP10.19□□□□□ -0.78
LIG1-211ENST00000596457 SF3A3Q12874 501 aaKnown RBP eCLIP10.19□□□□□ -0.78
LIG1-211ENST00000596457 TP53BP2Q13625 1128 aa10.19□□□□□ -0.78
LIG1-211ENST00000596457 CT45A2Q5DJT8 189 aa10.19□□□□□ -0.78
LIG1-211ENST00000596457 RNFT1Q5M7Z0 435 aa10.19□□□□□ -0.78
LIG1-211ENST00000596457 OGFOD2Q6N063 350 aa10.19□□□□□ -0.78
LIG1-211ENST00000596457 EPGNQ6UW88 154 aa10.19□□□□□ -0.78
LIG1-211ENST00000596457 ANKRD46Q86W74 232 aa10.19□□□□□ -0.78
LIG1-211ENST00000596457 DND1Q8IYX4 353 aaKnown RBP10.19□□□□□ -0.78
LIG1-211ENST00000596457 LRRC34Q8IZ02 419 aa10.19□□□□□ -0.78
LIG1-211ENST00000596457 CLECL1Q8IZS7 167 aa10.19□□□□□ -0.78
LIG1-211ENST00000596457 FBXW8Q8N3Y1 598 aa10.19□□□□□ -0.78
LIG1-211ENST00000596457 NATD1Q8N6N6 113 aa10.19□□□□□ -0.78
LIG1-211ENST00000596457 ST6GALNAC3Q8NDV1 305 aa10.19□□□□□ -0.78
LIG1-211ENST00000596457 C17orf47Q8NEP4 570 aa10.19□□□□□ -0.78
LIG1-211ENST00000596457 OR4A15Q8NGL6 344 aa10.19□□□□□ -0.78
LIG1-211ENST00000596457 OR5AK3PQ8NH89 298 aa10.19□□□□□ -0.78
LIG1-211ENST00000596457 SPPL2AQ8TCT8 520 aa10.19□□□□□ -0.78
LIG1-211ENST00000596457 GPR151Q8TDV0 419 aa10.19□□□□□ -0.78
LIG1-211ENST00000596457 ACTRT2Q8TDY3 377 aa10.19□□□□□ -0.78
LIG1-211ENST00000596457 PAQR8Q8TEZ7 354 aa10.19□□□□□ -0.78
LIG1-211ENST00000596457 OR5P2Q8WZ92 322 aa10.19□□□□□ -0.78
LIG1-211ENST00000596457 JADE3Q92613 823 aa10.19□□□□□ -0.78
LIG1-211ENST00000596457 EFHD2Q96C19 240 aaPredicted RBP10.19□□□□□ -0.78
LIG1-211ENST00000596457 C16orf58Q96GQ5 468 aa10.19□□□□□ -0.78
LIG1-211ENST00000596457 VSTM2LQ96N03 204 aa10.19□□□□□ -0.78
LIG1-211ENST00000596457 NODALQ96S42 347 aa10.19□□□□□ -0.78
LIG1-211ENST00000596457 ADOQ96SZ5 270 aa10.19□□□□□ -0.78
LIG1-211ENST00000596457 EBF4Q9BQW3 602 aa10.19□□□□□ -0.78
LIG1-211ENST00000596457 CXorf36Q9H7Y0 433 aa10.19□□□□□ -0.78
LIG1-211ENST00000596457 METTL7AQ9H8H3 244 aa10.19□□□□□ -0.78
LIG1-211ENST00000596457 SIRT3Q9NTG7 399 aaPredicted RBP10.19□□□□□ -0.78
LIG1-211ENST00000596457 ZCCHC3Q9NUD5 404 aaKnown RBP10.19□□□□□ -0.78
LIG1-211ENST00000596457 CNIH4Q9P003 139 aa10.19□□□□□ -0.78
LIG1-211ENST00000596457 PCDHGB4Q9UN71 923 aa10.19□□□□□ -0.78
LIG1-211ENST00000596457 OSGIN2Q9Y236 505 aa10.19□□□□□ -0.78
LIG1-211ENST00000596457 CHCHD2Q9Y6H1 151 aaPredicted RBP10.19□□□□□ -0.78
LIG1-211ENST00000596457 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.19□□□□□ -0.78
LIG1-211ENST00000596457 NCKAP5O14513 1909 aa10.18□□□□□ -0.78
LIG1-211ENST00000596457 GXYLT2A0PJZ3 443 aa10.18□□□□□ -0.78
LIG1-211ENST00000596457 E9PBE3 544 aa10.18□□□□□ -0.78
LIG1-211ENST00000596457 ACOT7O00154 380 aa10.18□□□□□ -0.78
LIG1-211ENST00000596457 GNB5O14775 395 aa10.18□□□□□ -0.78
LIG1-211ENST00000596457 POLR3GO15318 223 aaPredicted RBP10.18□□□□□ -0.78
LIG1-211ENST00000596457 ASNA1O43681 348 aa10.18□□□□□ -0.78
LIG1-211ENST00000596457 UGT2B11O75310 529 aa10.18□□□□□ -0.78
LIG1-211ENST00000596457 IL12AP29459 219 aa10.18□□□□□ -0.78
LIG1-211ENST00000596457 KIR3DL1P43629 444 aa10.18□□□□□ -0.78
LIG1-211ENST00000596457 MASP1P48740 699 aa10.18□□□□□ -0.78
LIG1-211ENST00000596457 IDH3AP50213 366 aa10.18□□□□□ -0.78
LIG1-211ENST00000596457 TDGF1P3P51864 188 aa10.18□□□□□ -0.78
LIG1-211ENST00000596457 DGKQP52824 942 aa10.18□□□□□ -0.78
LIG1-211ENST00000596457 PPIAP62937 165 aaKnown RBP10.18□□□□□ -0.78
LIG1-211ENST00000596457 PRR5P85299 388 aa10.18□□□□□ -0.78
LIG1-211ENST00000596457 HSF1Q00613 529 aa10.18□□□□□ -0.78
LIG1-211ENST00000596457 PSG6Q00889 435 aa10.18□□□□□ -0.78
LIG1-211ENST00000596457 GAB1Q13480 694 aa10.18□□□□□ -0.78
LIG1-211ENST00000596457 MLC1Q15049 377 aa10.18□□□□□ -0.78
LIG1-211ENST00000596457 FAM174BQ3ZCQ3 159 aa10.18□□□□□ -0.78
LIG1-211ENST00000596457 SPANXN4Q5MJ08 99 aa10.18□□□□□ -0.78
LIG1-211ENST00000596457 ZNF324BQ6AW86 544 aaPredicted RBP10.18□□□□□ -0.78
LIG1-211ENST00000596457 GK5Q6ZS86 529 aa10.18□□□□□ -0.78
LIG1-211ENST00000596457 NUP54Q7Z3B4 507 aa10.18□□□□□ -0.78
LIG1-211ENST00000596457 GALNT10Q86SR1 603 aa10.18□□□□□ -0.78
LIG1-211ENST00000596457 CLEC4FQ8N1N0 589 aa10.18□□□□□ -0.78
LIG1-211ENST00000596457 POGLUT1Q8NBL1 392 aa10.18□□□□□ -0.78
LIG1-211ENST00000596457 VPS37AQ8NEZ2 397 aa10.18□□□□□ -0.78
LIG1-211ENST00000596457 OR52N2Q8NGI0 321 aa10.18□□□□□ -0.78
LIG1-211ENST00000596457 PIK3R3Q92569 461 aa10.18□□□□□ -0.78
LIG1-211ENST00000596457 FAM120BQ96EK7 910 aaKnown RBP10.18□□□□□ -0.78
LIG1-211ENST00000596457 MAELQ96JY0 434 aaKnown RBP10.18□□□□□ -0.78
LIG1-211ENST00000596457 TEX37Q96LM6 180 aa10.18□□□□□ -0.78
LIG1-211ENST00000596457 COL21A1Q96P44 957 aa10.18□□□□□ -0.78
LIG1-211ENST00000596457 BTBD9Q96Q07 612 aa10.18□□□□□ -0.78
LIG1-211ENST00000596457 BARD1Q99728 777 aaKnown RBP10.18□□□□□ -0.78
LIG1-211ENST00000596457 SLX1AQ9BQ83 275 aa10.18□□□□□ -0.78
LIG1-211ENST00000596457 DOHHQ9BU89 302 aa10.18□□□□□ -0.78
LIG1-211ENST00000596457 TTTY12Q9BZ98 90 aa10.18□□□□□ -0.78
LIG1-211ENST00000596457 Q9N2J8 555 aa10.18□□□□□ -0.78
LIG1-211ENST00000596457 MED4Q9NPJ6 270 aa10.18□□□□□ -0.78
LIG1-211ENST00000596457 TCF7L2Q9NQB0 619 aa10.18□□□□□ -0.78
LIG1-211ENST00000596457 KLRF1Q9NZS2 232 aa10.18□□□□□ -0.78
LIG1-211ENST00000596457 SH3BGRL2Q9UJC5 107 aa10.18□□□□□ -0.78
LIG1-211ENST00000596457 CNOT11Q9UKZ1 510 aaKnown RBP10.18□□□□□ -0.78
LIG1-211ENST00000596457 CBLCQ9ULV8 474 aa10.18□□□□□ -0.78
LIG1-211ENST00000596457 GPR45Q9Y5Y3 372 aa10.18□□□□□ -0.78
LIG1-211ENST00000596457 LRRK2Q5S007 2527 aa10.18□□□□□ -0.78
LIG1-211ENST00000596457 ESPL1Q14674 2120 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms