RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 NCCRP1Q6ZVX7 275 aaPredicted RBP10.07□□□□□ -0.8
SHKBP1-206ENST00000595523 WDR53Q7Z5U6 358 aaPredicted RBP10.07□□□□□ -0.8
SHKBP1-206ENST00000595523 DOLPP1Q86YN1 238 aa10.07□□□□□ -0.8
SHKBP1-206ENST00000595523 RIMKLAQ8IXN7 391 aa10.07□□□□□ -0.8
SHKBP1-206ENST00000595523 SLC34A3Q8N130 599 aa10.07□□□□□ -0.8
SHKBP1-206ENST00000595523 KRTCAP2Q8N6L1 136 aa10.07□□□□□ -0.8
SHKBP1-206ENST00000595523 FNDC5Q8NAU1 212 aa10.07□□□□□ -0.8
SHKBP1-206ENST00000595523 OR7A2PQ8NGA2 310 aa10.07□□□□□ -0.8
SHKBP1-206ENST00000595523 OR4N2Q8NGD1 307 aa10.07□□□□□ -0.8
SHKBP1-206ENST00000595523 MTERF3Q96E29 417 aa10.07□□□□□ -0.8
SHKBP1-206ENST00000595523 CCDC120Q96HB5 630 aa10.07□□□□□ -0.8
SHKBP1-206ENST00000595523 PHF12Q96QT6 1004 aa10.07□□□□□ -0.8
SHKBP1-206ENST00000595523 DOHHQ9BU89 302 aa10.07□□□□□ -0.8
SHKBP1-206ENST00000595523 AKTIPQ9H8T0 292 aa10.07□□□□□ -0.8
SHKBP1-206ENST00000595523 ZFP64Q9NPA5 681 aa10.07□□□□□ -0.8
SHKBP1-206ENST00000595523 PNPOQ9NVS9 261 aa10.07□□□□□ -0.8
SHKBP1-206ENST00000595523 TAS2R9Q9NYW1 312 aa10.07□□□□□ -0.8
SHKBP1-206ENST00000595523 ATP6V1HQ9UI12 483 aa10.07□□□□□ -0.8
SHKBP1-206ENST00000595523 APCP25054 2843 aa10.07□□□□□ -0.8
SHKBP1-206ENST00000595523 HCFC1P51610 2035 aa10.07□□□□□ -0.8
SHKBP1-206ENST00000595523 INTS1Q8N201 2190 aaKnown RBP10.07□□□□□ -0.8
SHKBP1-206ENST00000595523 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.06□□□□□ -0.8
SHKBP1-206ENST00000595523 A0A1B0GVC2 190 aa10.06□□□□□ -0.8
SHKBP1-206ENST00000595523 OR6C70A6NIJ9 312 aa10.06□□□□□ -0.8
SHKBP1-206ENST00000595523 B4DXG7 233 aa10.06□□□□□ -0.8
SHKBP1-206ENST00000595523 TSPAN2O60636 221 aa10.06□□□□□ -0.8
SHKBP1-206ENST00000595523 COQ9O75208 318 aa10.06□□□□□ -0.8
SHKBP1-206ENST00000595523 SNUPNO95149 360 aaKnown RBP10.06□□□□□ -0.8
SHKBP1-206ENST00000595523 LAMP1P11279 417 aa10.06□□□□□ -0.8
SHKBP1-206ENST00000595523 G6PDP11413 515 aa10.06□□□□□ -0.8
SHKBP1-206ENST00000595523 PRPS2P11908 318 aa10.06□□□□□ -0.8
SHKBP1-206ENST00000595523 GP1BBP13224 206 aa10.06□□□□□ -0.8
SHKBP1-206ENST00000595523 ABOP16442 354 aa10.06□□□□□ -0.8
SHKBP1-206ENST00000595523 MAPK1P28482 360 aa10.06□□□□□ -0.8
SHKBP1-206ENST00000595523 PTGS2P35354 604 aa10.06□□□□□ -0.8
SHKBP1-206ENST00000595523 HPCAL1P37235 193 aa10.06□□□□□ -0.8
SHKBP1-206ENST00000595523 MAP3K8P41279 467 aa10.06□□□□□ -0.8
SHKBP1-206ENST00000595523 ADORA2A-AS1P86434 159 aa10.06□□□□□ -0.8
SHKBP1-206ENST00000595523 EMX2Q04743 252 aa10.06□□□□□ -0.8
SHKBP1-206ENST00000595523 ZNF155Q12901 538 aaPredicted RBP10.06□□□□□ -0.8
SHKBP1-206ENST00000595523 TTMPQ5BVD1 217 aa10.06□□□□□ -0.8
SHKBP1-206ENST00000595523 EMC4Q5J8M3 183 aa10.06□□□□□ -0.8
SHKBP1-206ENST00000595523 TBCELQ5QJ74 424 aa10.06□□□□□ -0.8
SHKBP1-206ENST00000595523 AGBL2Q5U5Z8 902 aa10.06□□□□□ -0.8
SHKBP1-206ENST00000595523 ARHGAP11AQ6P4F7 1023 aa10.06□□□□□ -0.8
SHKBP1-206ENST00000595523 TMEM81Q6P7N7 255 aa10.06□□□□□ -0.8
SHKBP1-206ENST00000595523 C3P1Q6ZMU1 363 aa10.06□□□□□ -0.8
SHKBP1-206ENST00000595523 TRILQ7L0X0 811 aa10.06□□□□□ -0.8
SHKBP1-206ENST00000595523 NUP54Q7Z3B4 507 aa10.06□□□□□ -0.8
SHKBP1-206ENST00000595523 SLC44A2Q8IWA5 706 aaPredicted RBP10.06□□□□□ -0.8
SHKBP1-206ENST00000595523 FAM57AQ8TBR7 257 aa10.06□□□□□ -0.8
SHKBP1-206ENST00000595523 RNF138Q8WVD3 245 aa10.06□□□□□ -0.8
SHKBP1-206ENST00000595523 HOXB13Q92826 284 aaPredicted RBP10.06□□□□□ -0.8
SHKBP1-206ENST00000595523 GIMAP5Q96F15 307 aa10.06□□□□□ -0.8
SHKBP1-206ENST00000595523 SLC35A4Q96G79 324 aa10.06□□□□□ -0.8
SHKBP1-206ENST00000595523 ZNF597Q96LX8 424 aa10.06□□□□□ -0.8
SHKBP1-206ENST00000595523 UBQLN3Q9H347 655 aa10.06□□□□□ -0.8
SHKBP1-206ENST00000595523 SIRT3Q9NTG7 399 aaPredicted RBP10.06□□□□□ -0.8
SHKBP1-206ENST00000595523 ACSS1Q9NUB1 689 aaPredicted RBP10.06□□□□□ -0.8
SHKBP1-206ENST00000595523 DDX18Q9NVP1 670 aaKnown RBP10.06□□□□□ -0.8
SHKBP1-206ENST00000595523 ASIC5Q9NY37 505 aa10.06□□□□□ -0.8
SHKBP1-206ENST00000595523 SH3BP4Q9P0V3 963 aa10.06□□□□□ -0.8
SHKBP1-206ENST00000595523 NTMQ9P121 344 aa10.06□□□□□ -0.8
SHKBP1-206ENST00000595523 PLEKHB1Q9UF11 243 aaPredicted RBP10.06□□□□□ -0.8
SHKBP1-206ENST00000595523 BOKQ9UMX3 212 aaPredicted RBP10.06□□□□□ -0.8
SHKBP1-206ENST00000595523 REM1O75628 298 aa10.05□□□□□ -0.8
SHKBP1-206ENST00000595523 TPOP07202 933 aa10.05□□□□□ -0.8
SHKBP1-206ENST00000595523 DIO3P55073 304 aa10.05□□□□□ -0.8
SHKBP1-206ENST00000595523 PER3P56645 1201 aa10.05□□□□□ -0.8
SHKBP1-206ENST00000595523 C21orf58P58505 322 aa10.05□□□□□ -0.8
SHKBP1-206ENST00000595523 OCRLQ01968 901 aa10.05□□□□□ -0.8
SHKBP1-206ENST00000595523 SMU1Q2TAY7 513 aa10.05□□□□□ -0.8
SHKBP1-206ENST00000595523 EXOSC6Q5RKV6 272 aaKnown RBP10.05□□□□□ -0.8
SHKBP1-206ENST00000595523 R3HCC1LQ7Z5L2 792 aaKnown RBP10.05□□□□□ -0.8
SHKBP1-206ENST00000595523 CD163Q86VB7 1156 aa10.05□□□□□ -0.8
SHKBP1-206ENST00000595523 MED12LQ86YW9 2145 aa10.05□□□□□ -0.8
SHKBP1-206ENST00000595523 MARVELD2Q8N4S9 558 aa10.05□□□□□ -0.8
SHKBP1-206ENST00000595523 ITLN2Q8WWU7 325 aaPredicted RBP10.05□□□□□ -0.8
SHKBP1-206ENST00000595523 EFHD2Q96C19 240 aaPredicted RBP10.05□□□□□ -0.8
SHKBP1-206ENST00000595523 COQ8BQ96D53 544 aa10.05□□□□□ -0.8
SHKBP1-206ENST00000595523 ZBED6CLQ96FA7 236 aaPredicted RBP10.05□□□□□ -0.8
SHKBP1-206ENST00000595523 TMEM41AQ96HV5 264 aa10.05□□□□□ -0.8
SHKBP1-206ENST00000595523 JSRP1Q96MG2 331 aaPredicted RBP10.05□□□□□ -0.8
SHKBP1-206ENST00000595523 COL21A1Q96P44 957 aa10.05□□□□□ -0.8
SHKBP1-206ENST00000595523 DMRTA2Q96SC8 542 aa10.05□□□□□ -0.8
SHKBP1-206ENST00000595523 ADOQ96SZ5 270 aa10.05□□□□□ -0.8
SHKBP1-206ENST00000595523 SH3GL2Q99962 352 aa10.05□□□□□ -0.8
SHKBP1-206ENST00000595523 LMF2Q9BU23 707 aaKnown RBP10.05□□□□□ -0.8
SHKBP1-206ENST00000595523 NUF2Q9BZD4 464 aa10.05□□□□□ -0.8
SHKBP1-206ENST00000595523 METTL7AQ9H8H3 244 aa10.05□□□□□ -0.8
SHKBP1-206ENST00000595523 MEAF6Q9HAF1 191 aa10.05□□□□□ -0.8
SHKBP1-206ENST00000595523 GALNT9Q9HCQ5 603 aa10.05□□□□□ -0.8
SHKBP1-206ENST00000595523 SPRR3Q9UBC9 169 aa10.05□□□□□ -0.8
SHKBP1-206ENST00000595523 TNFRSF10DQ9UBN6 386 aa10.05□□□□□ -0.8
SHKBP1-206ENST00000595523 MEMO1Q9Y316 297 aa10.05□□□□□ -0.8
SHKBP1-206ENST00000595523 HEATR5AQ86XA9 2040 aa10.05□□□□□ -0.8
SHKBP1-206ENST00000595523 C2orf72A6NCS6 295 aa10.04□□□□□ -0.8
SHKBP1-206ENST00000595523 PRAMEF25A6NGN4 478 aa10.04□□□□□ -0.8
SHKBP1-206ENST00000595523 C17orf51A8MQB3 221 aa10.04□□□□□ -0.8
SHKBP1-206ENST00000595523 AQP7O14520 342 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms