RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 MASP1P48740 699 aa13.83□□□□□ -0.2
TRIM28-205ENST00000595028 PDE7AQ13946 482 aa13.83□□□□□ -0.2
TRIM28-205ENST00000595028 SLC10A1Q14973 349 aa13.83□□□□□ -0.2
TRIM28-205ENST00000595028 RFTN2Q52LD8 501 aaPredicted RBP13.83□□□□□ -0.2
TRIM28-205ENST00000595028 CT45A2Q5DJT8 189 aa13.83□□□□□ -0.2
TRIM28-205ENST00000595028 FNDC7Q5VTL7 733 aa13.83□□□□□ -0.2
TRIM28-205ENST00000595028 TMEM198Q66K66 360 aa13.83□□□□□ -0.2
TRIM28-205ENST00000595028 DESI1Q6ICB0 168 aa13.83□□□□□ -0.2
TRIM28-205ENST00000595028 ANKRD26P1Q6NSI1 321 aa13.83□□□□□ -0.2
TRIM28-205ENST00000595028 LRIG3Q6UXM1 1119 aa13.83□□□□□ -0.2
TRIM28-205ENST00000595028 NUP54Q7Z3B4 507 aa13.83□□□□□ -0.2
TRIM28-205ENST00000595028 PACS2Q86VP3 889 aa13.83□□□□□ -0.2
TRIM28-205ENST00000595028 NUDCD3Q8IVD9 361 aa13.83□□□□□ -0.2
TRIM28-205ENST00000595028 MARVELD2Q8N4S9 558 aa13.83□□□□□ -0.2
TRIM28-205ENST00000595028 CLHC1Q8NHS4 586 aa13.83□□□□□ -0.2
TRIM28-205ENST00000595028 PPP1R14CQ8TAE6 165 aa13.83□□□□□ -0.2
TRIM28-205ENST00000595028 TMBIM1Q969X1 311 aa13.83□□□□□ -0.2
TRIM28-205ENST00000595028 NTNG2Q96CW9 530 aa13.83□□□□□ -0.2
TRIM28-205ENST00000595028 SLC35A4Q96G79 324 aa13.83□□□□□ -0.2
TRIM28-205ENST00000595028 TMEM41AQ96HV5 264 aa13.83□□□□□ -0.2
TRIM28-205ENST00000595028 PPP3R2Q96LZ3 170 aa13.83□□□□□ -0.2
TRIM28-205ENST00000595028 OSBPL11Q9BXB4 747 aa13.83□□□□□ -0.2
TRIM28-205ENST00000595028 SLC6A15Q9H2J7 730 aa13.83□□□□□ -0.2
TRIM28-205ENST00000595028 UBQLN3Q9H347 655 aa13.83□□□□□ -0.2
TRIM28-205ENST00000595028 REEP4Q9H6H4 257 aa13.83□□□□□ -0.2
TRIM28-205ENST00000595028 LDAHQ9H6V9 325 aa13.83□□□□□ -0.2
TRIM28-205ENST00000595028 METTL7AQ9H8H3 244 aa13.83□□□□□ -0.2
TRIM28-205ENST00000595028 ACKR4Q9NPB9 350 aa13.83□□□□□ -0.2
TRIM28-205ENST00000595028 TAS2R9Q9NYW1 312 aa13.83□□□□□ -0.2
TRIM28-205ENST00000595028 SPRR3Q9UBC9 169 aa13.83□□□□□ -0.2
TRIM28-205ENST00000595028 GIMAP2Q9UG22 337 aa13.83□□□□□ -0.2
TRIM28-205ENST00000595028 ZDHHC2Q9UIJ5 367 aa13.83□□□□□ -0.2
TRIM28-205ENST00000595028 C15orf41Q9Y2V0 281 aa13.83□□□□□ -0.2
TRIM28-205ENST00000595028 HRH3Q9Y5N1 445 aa13.83□□□□□ -0.2
TRIM28-205ENST00000595028 ACTL7BQ9Y614 415 aa13.83□□□□□ -0.2
TRIM28-205ENST00000595028 TRGV5A0A0B4J1U4 118 aa13.82□□□□□ -0.2
TRIM28-205ENST00000595028 PRAMEF25A6NGN4 478 aa13.82□□□□□ -0.2
TRIM28-205ENST00000595028 OR6C70A6NIJ9 312 aa13.82□□□□□ -0.2
TRIM28-205ENST00000595028 FIGNL2A6NMB9 653 aa13.82□□□□□ -0.2
TRIM28-205ENST00000595028 PLOD2O00469 737 aa13.82□□□□□ -0.2
TRIM28-205ENST00000595028 BIRC5O15392 142 aa13.82□□□□□ -0.2
TRIM28-205ENST00000595028 AKAP10O43572 662 aa13.82□□□□□ -0.2
TRIM28-205ENST00000595028 TBX19O60806 448 aa13.82□□□□□ -0.2
TRIM28-205ENST00000595028 SKAP2O75563 359 aaPredicted RBP13.82□□□□□ -0.2
TRIM28-205ENST00000595028 PSMG1O95456 288 aa13.82□□□□□ -0.2
TRIM28-205ENST00000595028 SERPINE1P05121 402 aa13.82□□□□□ -0.2
TRIM28-205ENST00000595028 IFI6P09912 130 aa13.82□□□□□ -0.2
TRIM28-205ENST00000595028 DHRS4L1P0CG22 281 aa13.82□□□□□ -0.2
TRIM28-205ENST00000595028 BCKDHAP12694 445 aa13.82□□□□□ -0.2
TRIM28-205ENST00000595028 GDF1P27539 372 aa13.82□□□□□ -0.2
TRIM28-205ENST00000595028 ASMTP46597 345 aa13.82□□□□□ -0.2
TRIM28-205ENST00000595028 ZNF385BQ569K4 471 aa13.82□□□□□ -0.2
TRIM28-205ENST00000595028 CES4AQ5XG92 561 aa13.82□□□□□ -0.2
TRIM28-205ENST00000595028 OR2L13Q8N349 312 aa13.82□□□□□ -0.2
TRIM28-205ENST00000595028 SARAFQ96BY9 339 aa13.82□□□□□ -0.2
TRIM28-205ENST00000595028 PPCDCQ96CD2 204 aa13.82□□□□□ -0.2
TRIM28-205ENST00000595028 PGM2Q96G03 612 aa13.82□□□□□ -0.2
TRIM28-205ENST00000595028 POM121Q96HA1 1249 aa13.82□□□□□ -0.2
TRIM28-205ENST00000595028 NODALQ96S42 347 aa13.82□□□□□ -0.2
TRIM28-205ENST00000595028 EXO5Q9H790 373 aa13.82□□□□□ -0.2
TRIM28-205ENST00000595028 PNPLA3Q9NST1 481 aa13.82□□□□□ -0.2
TRIM28-205ENST00000595028 DDX18Q9NVP1 670 aaKnown RBP13.82□□□□□ -0.2
TRIM28-205ENST00000595028 KLRF1Q9NZS2 232 aa13.82□□□□□ -0.2
TRIM28-205ENST00000595028 TNFRSF10DQ9UBN6 386 aa13.82□□□□□ -0.2
TRIM28-205ENST00000595028 C19orf53Q9UNZ5 99 aaPredicted RBP13.82□□□□□ -0.2
TRIM28-205ENST00000595028 TMEM114B3SHH9 223 aa13.81□□□□□ -0.2
TRIM28-205ENST00000595028 UPK1AO00322 258 aa13.81□□□□□ -0.2
TRIM28-205ENST00000595028 ABCB7O75027 752 aa13.81□□□□□ -0.2
TRIM28-205ENST00000595028 LYPLA1O75608 230 aaPredicted RBP13.81□□□□□ -0.2
TRIM28-205ENST00000595028 ZWINTO95229 277 aa13.81□□□□□ -0.2
TRIM28-205ENST00000595028 CLDN14O95500 239 aa13.81□□□□□ -0.2
TRIM28-205ENST00000595028 HSPA4LO95757 839 aa13.81□□□□□ -0.2
TRIM28-205ENST00000595028 MYZAPP0CAP1 466 aa13.81□□□□□ -0.2
TRIM28-205ENST00000595028 MAPK1P28482 360 aa13.81□□□□□ -0.2
TRIM28-205ENST00000595028 PTGDSP41222 190 aa13.81□□□□□ -0.2
TRIM28-205ENST00000595028 PSG6Q00889 435 aa13.81□□□□□ -0.2
TRIM28-205ENST00000595028 HSPB3Q12988 150 aa13.81□□□□□ -0.2
TRIM28-205ENST00000595028 SNTA1Q13424 505 aa13.81□□□□□ -0.2
TRIM28-205ENST00000595028 CDSNQ15517 529 aa13.81□□□□□ -0.2
TRIM28-205ENST00000595028 CHI3L2Q15782 390 aa13.81□□□□□ -0.2
TRIM28-205ENST00000595028 ZNF630Q2M218 657 aaPredicted RBP13.81□□□□□ -0.2
TRIM28-205ENST00000595028 GXYLT1Q4G148 440 aa13.81□□□□□ -0.2
TRIM28-205ENST00000595028 ATP6AP1LQ52LC2 224 aa13.81□□□□□ -0.2
TRIM28-205ENST00000595028 SLC30A6Q6NXT4 461 aa13.81□□□□□ -0.2
TRIM28-205ENST00000595028 ANGPTL8Q6UXH0 198 aa13.81□□□□□ -0.2
TRIM28-205ENST00000595028 LIX1Q8N485 282 aa13.81□□□□□ -0.2
TRIM28-205ENST00000595028 RPRMLQ8N4K4 120 aa13.81□□□□□ -0.2
TRIM28-205ENST00000595028 OR5M9Q8NGP3 310 aa13.81□□□□□ -0.2
TRIM28-205ENST00000595028 ZFP28Q8NHY6 868 aa13.81□□□□□ -0.2
TRIM28-205ENST00000595028 CIDECQ96AQ7 238 aaPredicted RBP13.81□□□□□ -0.2
TRIM28-205ENST00000595028 ZBTB9Q96C00 473 aa13.81□□□□□ -0.2
TRIM28-205ENST00000595028 ELP4Q96EB1 424 aa13.81□□□□□ -0.2
TRIM28-205ENST00000595028 C3orf30Q96M34 536 aa13.81□□□□□ -0.2
TRIM28-205ENST00000595028 COL21A1Q96P44 957 aa13.81□□□□□ -0.2
TRIM28-205ENST00000595028 BAIAP2L1Q9UHR4 511 aa13.81□□□□□ -0.2
TRIM28-205ENST00000595028 ITGB1BP2Q9UKP3 347 aa13.81□□□□□ -0.2
TRIM28-205ENST00000595028 ARHGAP21Q5T5U3 1957 aa13.81□□□□□ -0.2
TRIM28-205ENST00000595028 WDR91A4D1P6 747 aa13.8□□□□□ -0.2
TRIM28-205ENST00000595028 GNB5O14775 395 aa13.8□□□□□ -0.2
TRIM28-205ENST00000595028 SNPHO15079 494 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms