RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 SLC25A30Q5SVS4 291 aa15.51■□□□□ 0.07
LIG1-206ENST00000594067 PLET1Q6UQ28 207 aa15.51■□□□□ 0.07
LIG1-206ENST00000594067 LSRQ86X29 649 aaPredicted RBP15.51■□□□□ 0.07
LIG1-206ENST00000594067 OR8D4Q8NGM9 314 aa15.51■□□□□ 0.07
LIG1-206ENST00000594067 BBS10Q8TAM1 723 aa15.51■□□□□ 0.07
LIG1-206ENST00000594067 KCTD7Q96MP8 289 aa15.51■□□□□ 0.07
LIG1-206ENST00000594067 MED18Q9BUE0 208 aa15.51■□□□□ 0.07
LIG1-206ENST00000594067 PCBD2Q9H0N5 130 aa15.51■□□□□ 0.07
LIG1-206ENST00000594067 MRPS23Q9Y3D9 190 aaKnown RBP15.51■□□□□ 0.07
LIG1-206ENST00000594067 IRAK3Q9Y616 596 aa15.51■□□□□ 0.07
LIG1-206ENST00000594067 A0A087WUU8 490 aa15.51■□□□□ 0.07
LIG1-206ENST00000594067 A0A1W2PS29 197 aa15.51■□□□□ 0.07
LIG1-206ENST00000594067 PGRMC2O15173 223 aa15.51■□□□□ 0.07
LIG1-206ENST00000594067 TPD52L2O43399 206 aaKnown RBP15.51■□□□□ 0.07
LIG1-206ENST00000594067 LATO43561 262 aa15.51■□□□□ 0.07
LIG1-206ENST00000594067 HMGN2P05204 90 aaKnown RBP15.51■□□□□ 0.07
LIG1-206ENST00000594067 ACP2P11117 423 aa15.51■□□□□ 0.07
LIG1-206ENST00000594067 ACADMP11310 421 aa15.51■□□□□ 0.07
LIG1-206ENST00000594067 NTSP30990 170 aa15.51■□□□□ 0.07
LIG1-206ENST00000594067 CDK3Q00526 305 aa15.51■□□□□ 0.07
LIG1-206ENST00000594067 PLK5Q496M5 336 aa15.51■□□□□ 0.07
LIG1-206ENST00000594067 SMUG1Q53HV7 270 aa15.51■□□□□ 0.07
LIG1-206ENST00000594067 ENTPD8Q5MY95 495 aa15.51■□□□□ 0.07
LIG1-206ENST00000594067 CLEC12AQ5QGZ9 265 aa15.51■□□□□ 0.07
LIG1-206ENST00000594067 LCN1P1Q5VSP4 162 aa15.51■□□□□ 0.07
LIG1-206ENST00000594067 TIGD3Q6B0B8 471 aa15.51■□□□□ 0.07
LIG1-206ENST00000594067 TYW3Q6IPR3 259 aaKnown RBP15.51■□□□□ 0.07
LIG1-206ENST00000594067 ZNF730Q6ZMV8 503 aa15.51■□□□□ 0.07
LIG1-206ENST00000594067 RFPL4BQ6ZWI9 263 aa15.51■□□□□ 0.07
LIG1-206ENST00000594067 PRICKLE2Q7Z3G6 844 aa15.51■□□□□ 0.07
LIG1-206ENST00000594067 ABI3BPQ7Z7G0 1075 aa15.51■□□□□ 0.07
LIG1-206ENST00000594067 CCDC116Q8IYX3 515 aa15.51■□□□□ 0.07
LIG1-206ENST00000594067 TMEM163Q8TC26 289 aa15.51■□□□□ 0.07
LIG1-206ENST00000594067 TRIM43Q96BQ3 446 aaPredicted RBP15.51■□□□□ 0.07
LIG1-206ENST00000594067 FERD3LQ96RJ6 166 aa15.51■□□□□ 0.07
LIG1-206ENST00000594067 TAS2R7Q9NYW3 318 aa15.51■□□□□ 0.07
LIG1-206ENST00000594067 CNIH4Q9P003 139 aa15.51■□□□□ 0.07
LIG1-206ENST00000594067 SF3B6Q9Y3B4 125 aaKnown RBP15.51■□□□□ 0.07
LIG1-206ENST00000594067 IGKV1-8A0A0C4DH67 115 aa15.5■□□□□ 0.07
LIG1-206ENST00000594067 IGLON5A6NGN9 336 aa15.5■□□□□ 0.07
LIG1-206ENST00000594067 SLC35G4P0C7Q5 338 aa15.5■□□□□ 0.07
LIG1-206ENST00000594067 HOXB3P14651 431 aaPredicted RBP15.5■□□□□ 0.07
LIG1-206ENST00000594067 IL12RB1P42701 662 aa15.5■□□□□ 0.07
LIG1-206ENST00000594067 TAS2R38P59533 333 aa15.5■□□□□ 0.07
LIG1-206ENST00000594067 TNK1Q13470 666 aa15.5■□□□□ 0.07
LIG1-206ENST00000594067 ETFBKMTQ8IXQ9 262 aa15.5■□□□□ 0.07
LIG1-206ENST00000594067 OR8K5Q8NH50 307 aa15.5■□□□□ 0.07
LIG1-206ENST00000594067 OR52P1PQ8NH57 321 aa15.5■□□□□ 0.07
LIG1-206ENST00000594067 TEX47Q8TBZ9 253 aa15.5■□□□□ 0.07
LIG1-206ENST00000594067 POF1BQ8WVV4 589 aa15.5■□□□□ 0.07
LIG1-206ENST00000594067 KLK6Q92876 244 aa15.5■□□□□ 0.07
LIG1-206ENST00000594067 SNAPC3Q92966 411 aa15.5■□□□□ 0.07
LIG1-206ENST00000594067 MED30Q96HR3 178 aa15.5■□□□□ 0.07
LIG1-206ENST00000594067 NECTIN4Q96NY8 510 aa15.5■□□□□ 0.07
LIG1-206ENST00000594067 SOSTQ9BQB4 213 aa15.5■□□□□ 0.07
LIG1-206ENST00000594067 PPP1R3EQ9H7J1 279 aa15.5■□□□□ 0.07
LIG1-206ENST00000594067 NT5DC2Q9H857 520 aa15.5■□□□□ 0.07
LIG1-206ENST00000594067 ANKRA2Q9H9E1 313 aa15.5■□□□□ 0.07
LIG1-206ENST00000594067 ADAM29Q9UKF5 820 aa15.5■□□□□ 0.07
LIG1-206ENST00000594067 NUP210Q8TEM1 1887 aaPredicted RBP15.5■□□□□ 0.07
LIG1-206ENST00000594067 LRIT2A6NDA9 550 aa15.5■□□□□ 0.07
LIG1-206ENST00000594067 C4orf51C9J302 202 aa15.5■□□□□ 0.07
LIG1-206ENST00000594067 MAN2B1O00754 1011 aa15.5■□□□□ 0.07
LIG1-206ENST00000594067 PRODHO43272 600 aa15.5■□□□□ 0.07
LIG1-206ENST00000594067 HLA-DQB1P01920 261 aa15.5■□□□□ 0.07
LIG1-206ENST00000594067 DRD2P14416 443 aa15.5■□□□□ 0.07
LIG1-206ENST00000594067 HSD17B2P37059 387 aa15.5■□□□□ 0.07
LIG1-206ENST00000594067 MAP2K3P46734 347 aa15.5■□□□□ 0.07
LIG1-206ENST00000594067 TAS2R41P59536 307 aa15.5■□□□□ 0.07
LIG1-206ENST00000594067 CEP78Q5JTW2 689 aa15.5■□□□□ 0.07
LIG1-206ENST00000594067 KIAA1211LQ6NV74 962 aa15.5■□□□□ 0.07
LIG1-206ENST00000594067 ADAMTSL4Q6UY14 1074 aa15.5■□□□□ 0.07
LIG1-206ENST00000594067 SLC36A4Q6YBV0 504 aa15.5■□□□□ 0.07
LIG1-206ENST00000594067 PLCZ1Q86YW0 608 aa15.5■□□□□ 0.07
LIG1-206ENST00000594067 LINC00471Q8N535 108 aa15.5■□□□□ 0.07
LIG1-206ENST00000594067 SPATA5L1Q9BVQ7 753 aa15.5■□□□□ 0.07
LIG1-206ENST00000594067 OSGEPL1Q9H4B0 414 aa15.5■□□□□ 0.07
LIG1-206ENST00000594067 BCL2L10Q9HD36 194 aa15.5■□□□□ 0.07
LIG1-206ENST00000594067 GIMAP4Q9NUV9 329 aa15.5■□□□□ 0.07
LIG1-206ENST00000594067 ALG5Q9Y673 324 aa15.5■□□□□ 0.07
LIG1-206ENST00000594067 FAM170BA6NMN3 283 aa15.49■□□□□ 0.07
LIG1-206ENST00000594067 STK25O00506 426 aa15.49■□□□□ 0.07
LIG1-206ENST00000594067 CH25HO95992 272 aa15.49■□□□□ 0.07
LIG1-206ENST00000594067 FAM157BP0CG42 384 aa15.49■□□□□ 0.07
LIG1-206ENST00000594067 HOXD11P31277 338 aaPredicted RBP15.49■□□□□ 0.07
LIG1-206ENST00000594067 SOX18P35713 384 aa15.49■□□□□ 0.07
LIG1-206ENST00000594067 MTNR1AP48039 350 aa15.49■□□□□ 0.07
LIG1-206ENST00000594067 RAB40BQ12829 278 aa15.49■□□□□ 0.07
LIG1-206ENST00000594067 SLC27A4Q6P1M0 643 aa15.49■□□□□ 0.07
LIG1-206ENST00000594067 TMEM107Q6UX40 140 aa15.49■□□□□ 0.07
LIG1-206ENST00000594067 LHFPL3Q86UP9 236 aa15.49■□□□□ 0.07
LIG1-206ENST00000594067 DUSP18Q8NEJ0 188 aa15.49■□□□□ 0.07
LIG1-206ENST00000594067 SUN3Q8TAQ9 357 aa15.49■□□□□ 0.07
LIG1-206ENST00000594067 ZG16BQ96DA0 208 aa15.49■□□□□ 0.07
LIG1-206ENST00000594067 ZC3HAV1LQ96H79 300 aaKnown RBP15.49■□□□□ 0.07
LIG1-206ENST00000594067 ZNF764Q96H86 408 aaPredicted RBP15.49■□□□□ 0.07
LIG1-206ENST00000594067 TRMT61BQ9BVS5 477 aaKnown RBP15.49■□□□□ 0.07
LIG1-206ENST00000594067 RBFOX1Q9NWB1 397 aaKnown RBP15.49■□□□□ 0.07
LIG1-206ENST00000594067 DEC1Q9P2X7 70 aa15.49■□□□□ 0.07
LIG1-206ENST00000594067 GPR55Q9Y2T6 319 aaPredicted RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms