RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 FNDC5Q8NAU1 212 aa18.21■□□□□ 0.51
LSM4-203ENST00000593829 FAM156AQ8NDB6 213 aa18.21■□□□□ 0.51
LSM4-203ENST00000593829 TNIP2Q8NFZ5 429 aa18.21■□□□□ 0.51
LSM4-203ENST00000593829 EGLN2Q96KS0 407 aa18.21■□□□□ 0.51
LSM4-203ENST00000593829 MARK4Q96L34 752 aa18.21■□□□□ 0.51
LSM4-203ENST00000593829 ZNF681Q96N22 645 aa18.21■□□□□ 0.51
LSM4-203ENST00000593829 RNF32Q9H0A6 362 aa18.21■□□□□ 0.51
LSM4-203ENST00000593829 CXorf21Q9HAI6 301 aa18.21■□□□□ 0.51
LSM4-203ENST00000593829 GIMAP4Q9NUV9 329 aa18.21■□□□□ 0.51
LSM4-203ENST00000593829 ANAPC2Q9UJX6 822 aa18.21■□□□□ 0.51
LSM4-203ENST00000593829 HEMK1Q9Y5R4 338 aaPredicted RBP18.21■□□□□ 0.51
LSM4-203ENST00000593829 SH3PXD2BA1X283 911 aa18.2■□□□□ 0.5
LSM4-203ENST00000593829 PRORSD1PA6NEY8 169 aa18.2■□□□□ 0.5
LSM4-203ENST00000593829 B8ZZF3 427 aa18.2■□□□□ 0.5
LSM4-203ENST00000593829 IGKV3-11P04433 115 aa18.2■□□□□ 0.5
LSM4-203ENST00000593829 ATP1B1P05026 303 aa18.2■□□□□ 0.5
LSM4-203ENST00000593829 BCKDHAP12694 445 aa18.2■□□□□ 0.5
LSM4-203ENST00000593829 ERVK-8P63133 956 aa18.2■□□□□ 0.5
LSM4-203ENST00000593829 C19orf57Q0VDD7 668 aa18.2■□□□□ 0.5
LSM4-203ENST00000593829 ZBED5Q49AG3 693 aa18.2■□□□□ 0.5
LSM4-203ENST00000593829 C6orf10Q5SRN2 563 aa18.2■□□□□ 0.5
LSM4-203ENST00000593829 FAM180BQ6P0A1 224 aa18.2■□□□□ 0.5
LSM4-203ENST00000593829 ARMC10Q8N2F6 343 aa18.2■□□□□ 0.5
LSM4-203ENST00000593829 LRRC25Q8N386 305 aaPredicted RBP18.2■□□□□ 0.5
LSM4-203ENST00000593829 OR8K3Q8NH51 312 aa18.2■□□□□ 0.5
LSM4-203ENST00000593829 DOK4Q8TEW6 326 aa18.2■□□□□ 0.5
LSM4-203ENST00000593829 HAS2Q92819 552 aa18.2■□□□□ 0.5
LSM4-203ENST00000593829 ROPN1LQ96C74 230 aa18.2■□□□□ 0.5
LSM4-203ENST00000593829 TSSK3Q96PN8 268 aa18.2■□□□□ 0.5
LSM4-203ENST00000593829 SLC29A1Q99808 456 aa18.2■□□□□ 0.5
LSM4-203ENST00000593829 SLC35C2Q9NQQ7 365 aa18.2■□□□□ 0.5
LSM4-203ENST00000593829 FAIMQ9NVQ4 179 aa18.2■□□□□ 0.5
LSM4-203ENST00000593829 PLA2G3Q9NZ20 509 aa18.2■□□□□ 0.5
LSM4-203ENST00000593829 ERVK-19Q9WJR5 959 aa18.2■□□□□ 0.5
LSM4-203ENST00000593829 ENTPD4Q9Y227 616 aa18.2■□□□□ 0.5
LSM4-203ENST00000593829 B3GNT3Q9Y2A9 372 aa18.2■□□□□ 0.5
LSM4-203ENST00000593829 HRKO00198 91 aa18.19■□□□□ 0.5
LSM4-203ENST00000593829 UBDO15205 165 aa18.19■□□□□ 0.5
LSM4-203ENST00000593829 WDPCPO95876 746 aa18.19■□□□□ 0.5
LSM4-203ENST00000593829 NT5EP21589 574 aa18.19■□□□□ 0.5
LSM4-203ENST00000593829 ASMTP46597 345 aa18.19■□□□□ 0.5
LSM4-203ENST00000593829 MAD2L1Q13257 205 aaPredicted RBP18.19■□□□□ 0.5
LSM4-203ENST00000593829 SMU1Q2TAY7 513 aa18.19■□□□□ 0.5
LSM4-203ENST00000593829 MTX3Q5HYI7 312 aa18.19■□□□□ 0.5
LSM4-203ENST00000593829 Q6ZNX1 250 aa18.19■□□□□ 0.5
LSM4-203ENST00000593829 BEST3Q8N1M1 668 aa18.19■□□□□ 0.5
LSM4-203ENST00000593829 THAP3Q8WTV1 239 aaPredicted RBP18.19■□□□□ 0.5
LSM4-203ENST00000593829 PNPLA2Q96AD5 504 aa18.19■□□□□ 0.5
LSM4-203ENST00000593829 PCDHAC1Q9H158 963 aa18.19■□□□□ 0.5
LSM4-203ENST00000593829 AKTIPQ9H8T0 292 aa18.19■□□□□ 0.5
LSM4-203ENST00000593829 TAS2R7Q9NYW3 318 aa18.19■□□□□ 0.5
LSM4-203ENST00000593829 EXO1Q9UQ84 846 aaKnown RBP18.19■□□□□ 0.5
LSM4-203ENST00000593829 BSNQ9UPA5 3926 aa18.19■□□□□ 0.5
LSM4-203ENST00000593829 AQP12BA6NM10 295 aa18.19■□□□□ 0.5
LSM4-203ENST00000593829 BBIP1A8MTZ0 92 aa18.19■□□□□ 0.5
LSM4-203ENST00000593829 MAN1A2O60476 641 aa18.19■□□□□ 0.5
LSM4-203ENST00000593829 VPS4BO75351 444 aa18.19■□□□□ 0.5
LSM4-203ENST00000593829 STAMBPO95630 424 aa18.19■□□□□ 0.5
LSM4-203ENST00000593829 TCN1P20061 433 aaPredicted RBP18.19■□□□□ 0.5
LSM4-203ENST00000593829 MYF6P23409 242 aa18.19■□□□□ 0.5
LSM4-203ENST00000593829 TTKP33981 857 aa18.19■□□□□ 0.5
LSM4-203ENST00000593829 MLF1P58340 268 aa18.19■□□□□ 0.5
LSM4-203ENST00000593829 ESRRGP62508 458 aa18.19■□□□□ 0.5
LSM4-203ENST00000593829 SPATS1Q496A3 300 aa18.19■□□□□ 0.5
LSM4-203ENST00000593829 SLC6A19Q695T7 634 aa18.19■□□□□ 0.5
LSM4-203ENST00000593829 Q6ZS92 163 aa18.19■□□□□ 0.5
LSM4-203ENST00000593829 ZBTB49Q6ZSB9 765 aa18.19■□□□□ 0.5
LSM4-203ENST00000593829 AQP12AQ8IXF9 295 aa18.19■□□□□ 0.5
LSM4-203ENST00000593829 TMIGD2Q96BF3 282 aa18.19■□□□□ 0.5
LSM4-203ENST00000593829 C1orf50Q9BV19 199 aa18.19■□□□□ 0.5
LSM4-203ENST00000593829 EIF3LQ9Y262 564 aaKnown RBP18.19■□□□□ 0.5
LSM4-203ENST00000593829 SNX13Q9Y5W8 968 aa18.19■□□□□ 0.5
LSM4-203ENST00000593829 PRKNO60260 465 aaPredicted RBP18.18■□□□□ 0.5
LSM4-203ENST00000593829 PRPS2P11908 318 aa18.18■□□□□ 0.5
LSM4-203ENST00000593829 MAGEA8P43361 318 aa18.18■□□□□ 0.5
LSM4-203ENST00000593829 RNF4P78317 190 aa18.18■□□□□ 0.5
LSM4-203ENST00000593829 EMX2Q04743 252 aa18.18■□□□□ 0.5
LSM4-203ENST00000593829 DUSP2Q05923 314 aa18.18■□□□□ 0.5
LSM4-203ENST00000593829 GPR141Q7Z602 305 aa18.18■□□□□ 0.5
LSM4-203ENST00000593829 CCDC116Q8IYX3 515 aa18.18■□□□□ 0.5
LSM4-203ENST00000593829 LIX1Q8N485 282 aa18.18■□□□□ 0.5
LSM4-203ENST00000593829 OR5L2Q8NGL0 311 aa18.18■□□□□ 0.5
LSM4-203ENST00000593829 CLHC1Q8NHS4 586 aa18.18■□□□□ 0.5
LSM4-203ENST00000593829 ZNF420Q8TAQ5 688 aaPredicted RBP18.18■□□□□ 0.5
LSM4-203ENST00000593829 BBS4Q96RK4 519 aa18.18■□□□□ 0.5
LSM4-203ENST00000593829 SEMA6AQ9H2E6 1030 aa18.18■□□□□ 0.5
LSM4-203ENST00000593829 CCM2LQ9NUG4 571 aaPredicted RBP18.18■□□□□ 0.5
LSM4-203ENST00000593829 CSAG2Q9Y5P2 127 aa18.18■□□□□ 0.5
LSM4-203ENST00000593829 GABRR3A8MPY1 467 aa18.17■□□□□ 0.5
LSM4-203ENST00000593829 CDK2AP1O14519 115 aa18.17■□□□□ 0.5
LSM4-203ENST00000593829 MRASO14807 208 aa18.17■□□□□ 0.5
LSM4-203ENST00000593829 SUV39H1O43463 412 aa18.17■□□□□ 0.5
LSM4-203ENST00000593829 AKAP10O43572 662 aa18.17■□□□□ 0.5
LSM4-203ENST00000593829 LRATO95237 230 aa18.17■□□□□ 0.5
LSM4-203ENST00000593829 F10P00742 488 aa18.17■□□□□ 0.5
LSM4-203ENST00000593829 CT62P0C5K7 136 aa18.17■□□□□ 0.5
LSM4-203ENST00000593829 MPIP34949 423 aa18.17■□□□□ 0.5
LSM4-203ENST00000593829 NME5P56597 212 aa18.17■□□□□ 0.5
LSM4-203ENST00000593829 FUT7Q11130 342 aa18.17■□□□□ 0.5
LSM4-203ENST00000593829 MAP4K2Q12851 820 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms